RNA–Protein interactions for RNA: ENST00000480139.5

LIME1-205, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene LIME1, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-205ENST00000480139 ZNF587BE7ETH6 402 aa17.39■□□□□ 0.37
LIME1-205ENST00000480139 TIPRLO75663 272 aa17.39■□□□□ 0.37
LIME1-205ENST00000480139 KRT33AO76009 404 aa17.39■□□□□ 0.37
LIME1-205ENST00000480139 ZNF26P17031 533 aaPredicted RBP17.39■□□□□ 0.37
LIME1-205ENST00000480139 COL8A1P27658 744 aa17.39■□□□□ 0.37
LIME1-205ENST00000480139 MPGP29372 298 aa17.39■□□□□ 0.37
LIME1-205ENST00000480139 KIR2DL3P43628 341 aa17.39■□□□□ 0.37
LIME1-205ENST00000480139 PPP1R8Q12972 351 aaKnown RBP17.39■□□□□ 0.37
LIME1-205ENST00000480139 ATP6AP1Q15904 470 aa17.39■□□□□ 0.37
LIME1-205ENST00000480139 ARMC4Q5T2S8 1044 aa17.39■□□□□ 0.37
LIME1-205ENST00000480139 FAM205BPQ63HN1 556 aa17.39■□□□□ 0.37
LIME1-205ENST00000480139 SMARCD3Q6STE5 483 aa17.39■□□□□ 0.37
LIME1-205ENST00000480139 ZNF433Q8N7K0 673 aaPredicted RBP17.39■□□□□ 0.37
LIME1-205ENST00000480139 C1orf162Q8NEQ5 155 aaPredicted RBP17.39■□□□□ 0.37
LIME1-205ENST00000480139 FAM222BQ8WU58 562 aa17.39■□□□□ 0.37
LIME1-205ENST00000480139 BOD1Q96IK1 185 aa17.39■□□□□ 0.37
LIME1-205ENST00000480139 DACH2Q96NX9 599 aa17.39■□□□□ 0.37
LIME1-205ENST00000480139 DENND2DQ9H6A0 471 aaPredicted RBP17.39■□□□□ 0.37
LIME1-205ENST00000480139 MGAT4BQ9UQ53 548 aa17.39■□□□□ 0.37
LIME1-205ENST00000480139 MCIDASD6RGH6 385 aa17.38■□□□□ 0.37
LIME1-205ENST00000480139 E2F6O75461 281 aa17.38■□□□□ 0.37
LIME1-205ENST00000480139 UPK3AO75631 287 aa17.38■□□□□ 0.37
LIME1-205ENST00000480139 CD14P08571 375 aa17.38■□□□□ 0.37
LIME1-205ENST00000480139 ITGA5P08648 1049 aa17.38■□□□□ 0.37
LIME1-205ENST00000480139 IL32P24001 234 aa17.38■□□□□ 0.37
LIME1-205ENST00000480139 FASP25445 335 aa17.38■□□□□ 0.37
LIME1-205ENST00000480139 SH3BGRP55822 239 aaPredicted RBP17.38■□□□□ 0.37
LIME1-205ENST00000480139 FXYD6P3P58550 94 aa17.38■□□□□ 0.37
LIME1-205ENST00000480139 CTXN1P60606 82 aa17.38■□□□□ 0.37
LIME1-205ENST00000480139 RPL27P61353 136 aaKnown RBP17.38■□□□□ 0.37
LIME1-205ENST00000480139 TGFBR3Q03167 851 aa17.38■□□□□ 0.37
LIME1-205ENST00000480139 CAMK2DQ13557 499 aa17.38■□□□□ 0.37
LIME1-205ENST00000480139 MELKQ14680 651 aa17.38■□□□□ 0.37
LIME1-205ENST00000480139 STK11Q15831 433 aa17.38■□□□□ 0.37
LIME1-205ENST00000480139 C1QTNF12Q5T7M4 302 aa17.38■□□□□ 0.37
LIME1-205ENST00000480139 ZFP1Q6P2D0 407 aa17.38■□□□□ 0.37
LIME1-205ENST00000480139 BHLHA15Q7RTS1 189 aaPredicted RBP17.38■□□□□ 0.37
LIME1-205ENST00000480139 SSX8Q7RTT4 187 aa17.38■□□□□ 0.37
LIME1-205ENST00000480139 WDFY1Q8IWB7 410 aa17.38■□□□□ 0.37
LIME1-205ENST00000480139 GPR137CQ8N3F9 429 aa17.38■□□□□ 0.37
LIME1-205ENST00000480139 AQP11Q8NBQ7 271 aa17.38■□□□□ 0.37
LIME1-205ENST00000480139 OR10G2Q8NGC3 310 aa17.38■□□□□ 0.37
LIME1-205ENST00000480139 GIPC3Q8TF64 312 aa17.38■□□□□ 0.37
LIME1-205ENST00000480139 TMEM54Q969K7 222 aa17.38■□□□□ 0.37
LIME1-205ENST00000480139 ZNF566Q969W8 418 aa17.38■□□□□ 0.37
LIME1-205ENST00000480139 NRBF2Q96F24 287 aa17.38■□□□□ 0.37
LIME1-205ENST00000480139 ALKBH3Q96Q83 286 aaPredicted RBP17.38■□□□□ 0.37
LIME1-205ENST00000480139 ACTR6Q9GZN1 396 aa17.38■□□□□ 0.37
LIME1-205ENST00000480139 NTN4Q9HB63 628 aa17.38■□□□□ 0.37
LIME1-205ENST00000480139 B3GAT2Q9NPZ5 323 aa17.38■□□□□ 0.37
LIME1-205ENST00000480139 SH3D21A4FU49 640 aa17.37■□□□□ 0.37
LIME1-205ENST00000480139 LYZL6O75951 148 aa17.37■□□□□ 0.37
LIME1-205ENST00000480139 GASTP01350 101 aa17.37■□□□□ 0.37
LIME1-205ENST00000480139 IGHG1P01857 330 aa17.37■□□□□ 0.37
LIME1-205ENST00000480139 PGA4P0DJD7 388 aa17.37■□□□□ 0.37
LIME1-205ENST00000480139 PGA3P0DJD8 388 aa17.37■□□□□ 0.37
LIME1-205ENST00000480139 GSTM3P21266 225 aa17.37■□□□□ 0.37
LIME1-205ENST00000480139 RPL4P36578 427 aaKnown RBP17.37■□□□□ 0.37
LIME1-205ENST00000480139 CSNK1A1P48729 337 aa17.37■□□□□ 0.37
LIME1-205ENST00000480139 ARHGDIAP52565 204 aa17.37■□□□□ 0.37
LIME1-205ENST00000480139 IST1P53990 364 aa17.37■□□□□ 0.37
LIME1-205ENST00000480139 LGALS3BPQ08380 585 aa17.37■□□□□ 0.37
LIME1-205ENST00000480139 HIST3H3Q16695 136 aa17.37■□□□□ 0.37
LIME1-205ENST00000480139 OR7E24Q6IFN5 339 aa17.37■□□□□ 0.37
LIME1-205ENST00000480139 RPL13AP3Q6NVV1 102 aa17.37■□□□□ 0.37
LIME1-205ENST00000480139 SHQ1Q6PI26 577 aaKnown RBP17.37■□□□□ 0.37
LIME1-205ENST00000480139 CD300LDQ6UXZ3 194 aa17.37■□□□□ 0.37
LIME1-205ENST00000480139 ZNF620Q6ZNG0 422 aa17.37■□□□□ 0.37
LIME1-205ENST00000480139 LINGO2Q7L985 606 aa17.37■□□□□ 0.37
LIME1-205ENST00000480139 TMEM179BQ7Z7N9 219 aa17.37■□□□□ 0.37
LIME1-205ENST00000480139 P2RY8Q86VZ1 359 aa17.37■□□□□ 0.37
LIME1-205ENST00000480139 C17orf78Q8N4C9 275 aa17.37■□□□□ 0.37
LIME1-205ENST00000480139 FANK1Q8TC84 345 aa17.37■□□□□ 0.37
LIME1-205ENST00000480139 S100PBPQ96BU1 408 aa17.37■□□□□ 0.37
LIME1-205ENST00000480139 MUS81Q96NY9 551 aa17.37■□□□□ 0.37
LIME1-205ENST00000480139 BDH2Q9BUT1 245 aa17.37■□□□□ 0.37
LIME1-205ENST00000480139 KATNB1Q9BVA0 655 aa17.37■□□□□ 0.37
LIME1-205ENST00000480139 POLDIP3Q9BY77 421 aaKnown RBP17.37■□□□□ 0.37
LIME1-205ENST00000480139 MRPL13Q9BYD1 178 aaKnown RBP17.37■□□□□ 0.37
LIME1-205ENST00000480139 NRIP3Q9NQ35 241 aa17.37■□□□□ 0.37
LIME1-205ENST00000480139 CRIM1Q9NZV1 1036 aa17.37■□□□□ 0.37
LIME1-205ENST00000480139 A6NIZ1 184 aa17.36■□□□□ 0.37
LIME1-205ENST00000480139 EPXP11678 715 aa17.36■□□□□ 0.37
LIME1-205ENST00000480139 APEHP13798 732 aaKnown RBP17.36■□□□□ 0.37
LIME1-205ENST00000480139 ACADSP16219 412 aa17.36■□□□□ 0.37
LIME1-205ENST00000480139 FOXG1P55316 489 aaPredicted RBP17.36■□□□□ 0.37
LIME1-205ENST00000480139 RAP1BP61224 184 aa17.36■□□□□ 0.37
LIME1-205ENST00000480139 RAP1AP62834 184 aa17.36■□□□□ 0.37
LIME1-205ENST00000480139 ROR2Q01974 943 aaKnown RBP17.36■□□□□ 0.37
LIME1-205ENST00000480139 SNTB1Q13884 538 aaKnown RBP17.36■□□□□ 0.37
LIME1-205ENST00000480139 GABRA6Q16445 453 aa17.36■□□□□ 0.37
LIME1-205ENST00000480139 RFX4Q33E94 735 aa17.36■□□□□ 0.37
LIME1-205ENST00000480139 CARD17Q5XLA6 110 aa17.36■□□□□ 0.37
LIME1-205ENST00000480139 HMBOX1Q6NT76 420 aa17.36■□□□□ 0.37
LIME1-205ENST00000480139 THSD4Q6ZMP0 1018 aa17.36■□□□□ 0.37
LIME1-205ENST00000480139 DPY19L2P2Q6ZN68 376 aa17.36■□□□□ 0.37
LIME1-205ENST00000480139 RASSF6Q6ZTQ3 369 aa17.36■□□□□ 0.37
LIME1-205ENST00000480139 FAM122BQ7Z309 247 aa17.36■□□□□ 0.37
LIME1-205ENST00000480139 IGFN1Q86VF2 1251 aa17.36■□□□□ 0.37
LIME1-205ENST00000480139 CLDN22Q8N7P3 220 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms