RNA–Protein interactions for RNA: ENST00000476739.5

HDAC3-208, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 422 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-208ENST00000476739 ZNF587BE7ETH6 402 aa8.5□□□□□ -1.05
HDAC3-208ENST00000476739 M0R3G1 203 aa8.5□□□□□ -1.05
HDAC3-208ENST00000476739 GSC2O15499 205 aa8.5□□□□□ -1.05
HDAC3-208ENST00000476739 SLC43A1O75387 559 aa8.5□□□□□ -1.05
HDAC3-208ENST00000476739 KRT33AO76009 404 aa8.5□□□□□ -1.05
HDAC3-208ENST00000476739 FABP3P05413 133 aa8.5□□□□□ -1.05
HDAC3-208ENST00000476739 ZNF26P17031 533 aaPredicted RBP8.5□□□□□ -1.05
HDAC3-208ENST00000476739 RRM2P31350 389 aa8.5□□□□□ -1.05
HDAC3-208ENST00000476739 OMPP47874 163 aa8.5□□□□□ -1.05
HDAC3-208ENST00000476739 PSMD7P51665 324 aa8.5□□□□□ -1.05
HDAC3-208ENST00000476739 RPS4XP62701 263 aaKnown RBP8.5□□□□□ -1.05
HDAC3-208ENST00000476739 ELF3P78545 371 aaPredicted RBP8.5□□□□□ -1.05
HDAC3-208ENST00000476739 SPIBQ01892 262 aa8.5□□□□□ -1.05
HDAC3-208ENST00000476739 AKAP6Q13023 2319 aa8.5□□□□□ -1.05
HDAC3-208ENST00000476739 DGCR6Q14129 220 aa8.5□□□□□ -1.05
HDAC3-208ENST00000476739 PPA1Q15181 289 aa8.5□□□□□ -1.05
HDAC3-208ENST00000476739 CEACAM16Q2WEN9 425 aa8.5□□□□□ -1.05
HDAC3-208ENST00000476739 HIKESHIQ53FT3 197 aa8.5□□□□□ -1.05
HDAC3-208ENST00000476739 FGD3Q5JSP0 725 aa8.5□□□□□ -1.05
HDAC3-208ENST00000476739 TIMM23BQ5SRD1 257 aa8.5□□□□□ -1.05
HDAC3-208ENST00000476739 IGFN1Q86VF2 1251 aa8.5□□□□□ -1.05
HDAC3-208ENST00000476739 ZDHHC21Q8IVQ6 265 aa8.5□□□□□ -1.05
HDAC3-208ENST00000476739 RNF113BQ8IZP6 322 aaKnown RBP8.5□□□□□ -1.05
HDAC3-208ENST00000476739 ANKK1Q8NFD2 765 aa8.5□□□□□ -1.05
HDAC3-208ENST00000476739 OR1K1Q8NGR3 316 aa8.5□□□□□ -1.05
HDAC3-208ENST00000476739 OR51A7Q8NH64 312 aa8.5□□□□□ -1.05
HDAC3-208ENST00000476739 HSD17B8Q92506 261 aa8.5□□□□□ -1.05
HDAC3-208ENST00000476739 PLPPR2Q96GM1 343 aa8.5□□□□□ -1.05
HDAC3-208ENST00000476739 FAM46AQ96IP4 442 aaKnown RBP8.5□□□□□ -1.05
HDAC3-208ENST00000476739 TNFRSF13CQ96RJ3 184 aa8.5□□□□□ -1.05
HDAC3-208ENST00000476739 GPA33Q99795 319 aa8.5□□□□□ -1.05
HDAC3-208ENST00000476739 C1QTNF6Q9BXI9 259 aa8.5□□□□□ -1.05
HDAC3-208ENST00000476739 MUC13Q9H3R2 512 aa8.5□□□□□ -1.05
HDAC3-208ENST00000476739 ANKRD19PQ9H560 264 aa8.5□□□□□ -1.05
HDAC3-208ENST00000476739 GPR35Q9HC97 309 aa8.5□□□□□ -1.05
HDAC3-208ENST00000476739 HIF3AQ9Y2N7 669 aa8.5□□□□□ -1.05
HDAC3-208ENST00000476739 SLC25A15Q9Y619 301 aa8.5□□□□□ -1.05
HDAC3-208ENST00000476739 APCP25054 2843 aa8.5□□□□□ -1.05
HDAC3-208ENST00000476739 A0A096LPE4 126 aa8.49□□□□□ -1.05
HDAC3-208ENST00000476739 A0A1W2PPZ6 126 aa8.49□□□□□ -1.05
HDAC3-208ENST00000476739 SH3PXD2BA1X283 911 aa8.49□□□□□ -1.05
HDAC3-208ENST00000476739 ZNF503-AS2A6NEH8 195 aa8.49□□□□□ -1.05
HDAC3-208ENST00000476739 DPRXA6NFQ7 191 aa8.49□□□□□ -1.05
HDAC3-208ENST00000476739 ZNF726A6NNF4 738 aa8.49□□□□□ -1.05
HDAC3-208ENST00000476739 EFCAB9A8MZ26 197 aa8.49□□□□□ -1.05
HDAC3-208ENST00000476739 RPL36A-HNRNPH2H7BZ11 118 aa8.49□□□□□ -1.05
HDAC3-208ENST00000476739 CLOCKO15516 846 aa8.49□□□□□ -1.05
HDAC3-208ENST00000476739 AKAP8O43823 692 aaKnown RBP8.49□□□□□ -1.05
HDAC3-208ENST00000476739 SEC14L2O76054 403 aa8.49□□□□□ -1.05
HDAC3-208ENST00000476739 GADD45GO95257 159 aa8.49□□□□□ -1.05
HDAC3-208ENST00000476739 SAGP10523 405 aaPredicted RBP8.49□□□□□ -1.05
HDAC3-208ENST00000476739 ITGA2P17301 1181 aa8.49□□□□□ -1.05
HDAC3-208ENST00000476739 MAGEA2P43356 314 aa8.49□□□□□ -1.05
HDAC3-208ENST00000476739 LIMS1P48059 325 aa8.49□□□□□ -1.05
HDAC3-208ENST00000476739 ERFP50548 548 aa8.49□□□□□ -1.05
HDAC3-208ENST00000476739 FXYD6P3P58550 94 aa8.49□□□□□ -1.05
HDAC3-208ENST00000476739 TUBA1BP68363 451 aa8.49□□□□□ -1.05
HDAC3-208ENST00000476739 TUBA4AP68366 448 aa8.49□□□□□ -1.05
HDAC3-208ENST00000476739 ARF1P84077 181 aaKnown RBP8.49□□□□□ -1.05
HDAC3-208ENST00000476739 PPP1R8Q12972 351 aaKnown RBP8.49□□□□□ -1.05
HDAC3-208ENST00000476739 ACKR1Q16570 336 aa8.49□□□□□ -1.05
HDAC3-208ENST00000476739 TBRG1Q3YBR2 411 aa8.49□□□□□ -1.05
HDAC3-208ENST00000476739 DNAL1Q4LDG9 190 aa8.49□□□□□ -1.05
HDAC3-208ENST00000476739 ALG10Q5BKT4 473 aa8.49□□□□□ -1.05
HDAC3-208ENST00000476739 BEX5Q5H9J7 111 aa8.49□□□□□ -1.05
HDAC3-208ENST00000476739 MTX3Q5HYI7 312 aa8.49□□□□□ -1.05
HDAC3-208ENST00000476739 NCMAPQ5T1S8 102 aa8.49□□□□□ -1.05
HDAC3-208ENST00000476739 HMBOX1Q6NT76 420 aa8.49□□□□□ -1.05
HDAC3-208ENST00000476739 TMPRSS11FQ6ZWK6 438 aa8.49□□□□□ -1.05
HDAC3-208ENST00000476739 TUBA1AQ71U36 451 aa8.49□□□□□ -1.05
HDAC3-208ENST00000476739 PIWIL3Q7Z3Z3 882 aaKnown RBP8.49□□□□□ -1.05
HDAC3-208ENST00000476739 ZER1Q7Z7L7 766 aa8.49□□□□□ -1.05
HDAC3-208ENST00000476739 GPR137CQ8N3F9 429 aa8.49□□□□□ -1.05
HDAC3-208ENST00000476739 CLDN22Q8N7P3 220 aa8.49□□□□□ -1.05
HDAC3-208ENST00000476739 OR4K5Q8NGD3 323 aa8.49□□□□□ -1.05
HDAC3-208ENST00000476739 OR6X1Q8NH79 312 aa8.49□□□□□ -1.05
HDAC3-208ENST00000476739 LILRB1Q8NHL6 650 aaPredicted RBP8.49□□□□□ -1.05
HDAC3-208ENST00000476739 ASB10Q8WXI3 467 aa8.49□□□□□ -1.05
HDAC3-208ENST00000476739 BCL2L2Q92843 193 aaPredicted RBP8.49□□□□□ -1.05
HDAC3-208ENST00000476739 NEUROG1Q92886 237 aa8.49□□□□□ -1.05
HDAC3-208ENST00000476739 MCUR1Q96AQ8 359 aa8.49□□□□□ -1.05
HDAC3-208ENST00000476739 CRLF2Q9HC73 371 aa8.49□□□□□ -1.05
HDAC3-208ENST00000476739 SLC17A5Q9NRA2 495 aa8.49□□□□□ -1.05
HDAC3-208ENST00000476739 INIPQ9NRY2 104 aa8.49□□□□□ -1.05
HDAC3-208ENST00000476739 VNN3Q9NY84 501 aa8.49□□□□□ -1.05
HDAC3-208ENST00000476739 CADP27708 2225 aa8.49□□□□□ -1.05
HDAC3-208ENST00000476739 PDZD2O15018 2839 aa8.48□□□□□ -1.05
HDAC3-208ENST00000476739 RAI1Q7Z5J4 1906 aaPredicted RBP8.48□□□□□ -1.05
HDAC3-208ENST00000476739 POLQO75417 2590 aa8.48□□□□□ -1.05
HDAC3-208ENST00000476739 SPG11Q96JI7 2443 aa8.48□□□□□ -1.05
HDAC3-208ENST00000476739 OR6C65A6NJZ3 312 aa8.48□□□□□ -1.05
HDAC3-208ENST00000476739 MCIDASD6RGH6 385 aa8.48□□□□□ -1.05
HDAC3-208ENST00000476739 PTP4A3O75365 173 aa8.48□□□□□ -1.05
HDAC3-208ENST00000476739 TRMUO75648 421 aaKnown RBP8.48□□□□□ -1.05
HDAC3-208ENST00000476739 ATP5HO75947 161 aa8.48□□□□□ -1.05
HDAC3-208ENST00000476739 GOSR1O95249 250 aa8.48□□□□□ -1.05
HDAC3-208ENST00000476739 BCL10O95999 233 aa8.48□□□□□ -1.05
HDAC3-208ENST00000476739 RPSAP08865 295 aaKnown RBP8.48□□□□□ -1.05
HDAC3-208ENST00000476739 PGA4P0DJD7 388 aa8.48□□□□□ -1.05
HDAC3-208ENST00000476739 PGA3P0DJD8 388 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms