RNA–Protein interactions for RNA: ENST00000473969.6

USF1-205, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-205ENST00000473969 TEX15Q9BXT5 2789 aa12.09□□□□□ -0.47
USF1-205ENST00000473969 TRBV4-1A0A0J9YWV2 114 aa12.08□□□□□ -0.48
USF1-205ENST00000473969 AQP12BA6NM10 295 aa12.08□□□□□ -0.48
USF1-205ENST00000473969 DEFB108AA8MXU0 73 aa12.08□□□□□ -0.48
USF1-205ENST00000473969 RPL36A-HNRNPH2H7BZ11 118 aa12.08□□□□□ -0.48
USF1-205ENST00000473969 GSC2O15499 205 aa12.08□□□□□ -0.48
USF1-205ENST00000473969 KLF4O43474 513 aa12.08□□□□□ -0.48
USF1-205ENST00000473969 OR10H3O60404 316 aa12.08□□□□□ -0.48
USF1-205ENST00000473969 IGHG1P01857 330 aa12.08□□□□□ -0.48
USF1-205ENST00000473969 CD3EP07766 207 aa12.08□□□□□ -0.48
USF1-205ENST00000473969 RPL4P36578 427 aaKnown RBP12.08□□□□□ -0.48
USF1-205ENST00000473969 GPR4P46093 362 aa12.08□□□□□ -0.48
USF1-205ENST00000473969 FOXG1P55316 489 aaPredicted RBP12.08□□□□□ -0.48
USF1-205ENST00000473969 LSM11P83369 360 aaKnown RBP eCLIP12.08□□□□□ -0.48
USF1-205ENST00000473969 FLOT2Q14254 428 aa12.08□□□□□ -0.48
USF1-205ENST00000473969 CEACAM16Q2WEN9 425 aa12.08□□□□□ -0.48
USF1-205ENST00000473969 ZBED5Q49AG3 693 aa12.08□□□□□ -0.48
USF1-205ENST00000473969 ANKRD16Q6P6B7 361 aa12.08□□□□□ -0.48
USF1-205ENST00000473969 TMPRSS11FQ6ZWK6 438 aa12.08□□□□□ -0.48
USF1-205ENST00000473969 PIWIL3Q7Z3Z3 882 aaKnown RBP12.08□□□□□ -0.48
USF1-205ENST00000473969 SPATA24Q86W54 205 aa12.08□□□□□ -0.48
USF1-205ENST00000473969 AQP12AQ8IXF9 295 aa12.08□□□□□ -0.48
USF1-205ENST00000473969 TMEM123Q8N131 208 aa12.08□□□□□ -0.48
USF1-205ENST00000473969 OR1K1Q8NGR3 316 aa12.08□□□□□ -0.48
USF1-205ENST00000473969 MOSPD2Q8NHP6 518 aa12.08□□□□□ -0.48
USF1-205ENST00000473969 FAM46AQ96IP4 442 aaKnown RBP12.08□□□□□ -0.48
USF1-205ENST00000473969 DHRS1Q96LJ7 313 aa12.08□□□□□ -0.48
USF1-205ENST00000473969 ALPK1Q96QP1 1244 aa12.08□□□□□ -0.48
USF1-205ENST00000473969 YY1AP1Q9H869 796 aa12.08□□□□□ -0.48
USF1-205ENST00000473969 MOV10Q9HCE1 1003 aaKnown RBP12.08□□□□□ -0.48
USF1-205ENST00000473969 OBP2BQ9NPH6 170 aa12.08□□□□□ -0.48
USF1-205ENST00000473969 HIF3AQ9Y2N7 669 aa12.08□□□□□ -0.48
USF1-205ENST00000473969 ADGRG4Q8IZF6 3080 aa12.07□□□□□ -0.48
USF1-205ENST00000473969 NBPF19A0A087WUL8 3843 aa12.07□□□□□ -0.48
USF1-205ENST00000473969 TRAV27A0A087WT01 109 aa12.07□□□□□ -0.48
USF1-205ENST00000473969 A0A1W2PR80 420 aa12.07□□□□□ -0.48
USF1-205ENST00000473969 TCRBV5S2A0A599 114 aa12.07□□□□□ -0.48
USF1-205ENST00000473969 TNFRSF11BO00300 401 aa12.07□□□□□ -0.48
USF1-205ENST00000473969 ENTPD5O75356 428 aa12.07□□□□□ -0.48
USF1-205ENST00000473969 RAP2AP10114 183 aa12.07□□□□□ -0.48
USF1-205ENST00000473969 NR2C1P13056 603 aa12.07□□□□□ -0.48
USF1-205ENST00000473969 HOXB1P14653 301 aaPredicted RBP12.07□□□□□ -0.48
USF1-205ENST00000473969 FUT4P22083 530 aa12.07□□□□□ -0.48
USF1-205ENST00000473969 CTXN1P60606 82 aa12.07□□□□□ -0.48
USF1-205ENST00000473969 ARF1P84077 181 aaKnown RBP12.07□□□□□ -0.48
USF1-205ENST00000473969 TOP3AQ13472 1001 aaPredicted RBP12.07□□□□□ -0.48
USF1-205ENST00000473969 ACKR1Q16570 336 aa12.07□□□□□ -0.48
USF1-205ENST00000473969 TBRG1Q3YBR2 411 aa12.07□□□□□ -0.48
USF1-205ENST00000473969 HIKESHIQ53FT3 197 aa12.07□□□□□ -0.48
USF1-205ENST00000473969 TMEM108Q6UXF1 575 aa12.07□□□□□ -0.48
USF1-205ENST00000473969 CCDC121Q6ZUS5 278 aa12.07□□□□□ -0.48
USF1-205ENST00000473969 CDH24Q86UP0 819 aa12.07□□□□□ -0.48
USF1-205ENST00000473969 MEX3DQ86XN8 651 aaKnown RBP12.07□□□□□ -0.48
USF1-205ENST00000473969 CCDC36Q8IYA8 594 aa12.07□□□□□ -0.48
USF1-205ENST00000473969 DEPDC4Q8N2C3 294 aa12.07□□□□□ -0.48
USF1-205ENST00000473969 LINC00471Q8N535 108 aa12.07□□□□□ -0.48
USF1-205ENST00000473969 OR13C2Q8NGS9 318 aa12.07□□□□□ -0.48
USF1-205ENST00000473969 TNFRSF13CQ96RJ3 184 aa12.07□□□□□ -0.48
USF1-205ENST00000473969 MMADHCQ9H3L0 296 aaPredicted RBP12.07□□□□□ -0.48
USF1-205ENST00000473969 TXNIPQ9H3M7 391 aa12.07□□□□□ -0.48
USF1-205ENST00000473969 GLTPQ9NZD2 209 aa12.07□□□□□ -0.48
USF1-205ENST00000473969 SLC25A15Q9Y619 301 aa12.07□□□□□ -0.48
USF1-205ENST00000473969 A0A096LPE4 126 aa12.06□□□□□ -0.48
USF1-205ENST00000473969 A0A1W2PPZ6 126 aa12.06□□□□□ -0.48
USF1-205ENST00000473969 DHRS12A0PJE2 317 aa12.06□□□□□ -0.48
USF1-205ENST00000473969 SH3PXD2BA1X283 911 aa12.06□□□□□ -0.48
USF1-205ENST00000473969 UNC119BA6NIH7 251 aa12.06□□□□□ -0.48
USF1-205ENST00000473969 A6NIZ1 184 aa12.06□□□□□ -0.48
USF1-205ENST00000473969 ZNF99A8MXY4 864 aaPredicted RBP12.06□□□□□ -0.48
USF1-205ENST00000473969 CENPBD1B2RD01 187 aa12.06□□□□□ -0.48
USF1-205ENST00000473969 M0R1B8 84 aa12.06□□□□□ -0.48
USF1-205ENST00000473969 GNGT2O14610 69 aa12.06□□□□□ -0.48
USF1-205ENST00000473969 ACOT8O14734 319 aa12.06□□□□□ -0.48
USF1-205ENST00000473969 ACADSP16219 412 aa12.06□□□□□ -0.48
USF1-205ENST00000473969 DNASE1P24855 282 aa12.06□□□□□ -0.48
USF1-205ENST00000473969 PTAFRP25105 342 aa12.06□□□□□ -0.48
USF1-205ENST00000473969 CAPZA2P47755 286 aa12.06□□□□□ -0.48
USF1-205ENST00000473969 ZNF83P51522 516 aa12.06□□□□□ -0.48
USF1-205ENST00000473969 ZNF84P51523 738 aa12.06□□□□□ -0.48
USF1-205ENST00000473969 RAP1BP61224 184 aa12.06□□□□□ -0.48
USF1-205ENST00000473969 RPL27P61353 136 aaKnown RBP12.06□□□□□ -0.48
USF1-205ENST00000473969 RAP1AP62834 184 aa12.06□□□□□ -0.48
USF1-205ENST00000473969 KEAP1Q14145 624 aa12.06□□□□□ -0.48
USF1-205ENST00000473969 IQCCQ4KMZ1 466 aa12.06□□□□□ -0.48
USF1-205ENST00000473969 NCMAPQ5T1S8 102 aa12.06□□□□□ -0.48
USF1-205ENST00000473969 FAM205BPQ63HN1 556 aa12.06□□□□□ -0.48
USF1-205ENST00000473969 PGM2L1Q6PCE3 622 aa12.06□□□□□ -0.48
USF1-205ENST00000473969 NHLRC1Q6VVB1 395 aa12.06□□□□□ -0.48
USF1-205ENST00000473969 LINGO2Q7L985 606 aa12.06□□□□□ -0.48
USF1-205ENST00000473969 MAGEE2Q8TD90 523 aaPredicted RBP12.06□□□□□ -0.48
USF1-205ENST00000473969 GNPDA2Q8TDQ7 276 aa12.06□□□□□ -0.48
USF1-205ENST00000473969 ASB10Q8WXI3 467 aa12.06□□□□□ -0.48
USF1-205ENST00000473969 NANOS1Q8WY41 292 aaKnown RBP12.06□□□□□ -0.48
USF1-205ENST00000473969 C1QTNF6Q9BXI9 259 aa12.06□□□□□ -0.48
USF1-205ENST00000473969 CADM1Q9BY67 442 aaKnown RBP12.06□□□□□ -0.48
USF1-205ENST00000473969 REEP1Q9H902 201 aa12.06□□□□□ -0.48
USF1-205ENST00000473969 UBTD1Q9HAC8 227 aa12.06□□□□□ -0.48
USF1-205ENST00000473969 GRHPRQ9UBQ7 328 aa12.06□□□□□ -0.48
USF1-205ENST00000473969 MGAT4BQ9UQ53 548 aa12.06□□□□□ -0.48
USF1-205ENST00000473969 POMPQ9Y244 141 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms