RNA–Protein interactions for RNA: ENST00000472318.1

SCAF4-205, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 3

Gene SCAF4, Length 796 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-205ENST00000472318 SDHDO14521 159 aa5.93□□□□□ -1.46
SCAF4-205ENST00000472318 SCO2O43819 266 aa5.93□□□□□ -1.46
SCAF4-205ENST00000472318 CTSVO60911 334 aa5.93□□□□□ -1.46
SCAF4-205ENST00000472318 WDR1O75083 606 aa5.93□□□□□ -1.46
SCAF4-205ENST00000472318 CBR3O75828 277 aa5.93□□□□□ -1.46
SCAF4-205ENST00000472318 CLPTM1O96005 669 aa5.93□□□□□ -1.46
SCAF4-205ENST00000472318 HLA-DQB2P05538 268 aa5.93□□□□□ -1.46
SCAF4-205ENST00000472318 POU2F1P14859 743 aa5.93□□□□□ -1.46
SCAF4-205ENST00000472318 CHATP28329 748 aa5.93□□□□□ -1.46
SCAF4-205ENST00000472318 RPS5P46782 204 aaKnown RBP5.93□□□□□ -1.46
SCAF4-205ENST00000472318 CYB561P49447 251 aa5.93□□□□□ -1.46
SCAF4-205ENST00000472318 RAB9AP51151 201 aa5.93□□□□□ -1.46
SCAF4-205ENST00000472318 NDUFA8P51970 172 aa5.93□□□□□ -1.46
SCAF4-205ENST00000472318 SEC61GP60059 68 aa5.93□□□□□ -1.46
SCAF4-205ENST00000472318 PPIAP62937 165 aaKnown RBP5.93□□□□□ -1.46
SCAF4-205ENST00000472318 MAT1AQ00266 395 aaKnown RBP5.93□□□□□ -1.46
SCAF4-205ENST00000472318 FHL1Q13642 323 aa5.93□□□□□ -1.46
SCAF4-205ENST00000472318 HSP90AA4PQ58FG1 418 aa5.93□□□□□ -1.46
SCAF4-205ENST00000472318 XKR7Q5GH72 579 aa5.93□□□□□ -1.46
SCAF4-205ENST00000472318 C10orf25Q5T742 122 aa5.93□□□□□ -1.46
SCAF4-205ENST00000472318 ZNF658Q5TYW1 1059 aaPredicted RBP5.93□□□□□ -1.46
SCAF4-205ENST00000472318 FRMPD2BQ6IN97 320 aa5.93□□□□□ -1.46
SCAF4-205ENST00000472318 CYP4V2Q6ZWL3 525 aaPredicted RBP5.93□□□□□ -1.46
SCAF4-205ENST00000472318 CENPUQ71F23 418 aa5.93□□□□□ -1.46
SCAF4-205ENST00000472318 ZNF534Q76KX8 674 aa5.93□□□□□ -1.46
SCAF4-205ENST00000472318 LHFPL4Q7Z7J7 247 aa5.93□□□□□ -1.46
SCAF4-205ENST00000472318 KIF2BQ8N4N8 673 aa5.93□□□□□ -1.46
SCAF4-205ENST00000472318 SLC5A8Q8N695 610 aa5.93□□□□□ -1.46
SCAF4-205ENST00000472318 NRACQ8N912 160 aa5.93□□□□□ -1.46
SCAF4-205ENST00000472318 OR5AR1Q8NGP9 310 aa5.93□□□□□ -1.46
SCAF4-205ENST00000472318 GPX8Q8TED1 209 aa5.93□□□□□ -1.46
SCAF4-205ENST00000472318 RFT1Q96AA3 541 aa5.93□□□□□ -1.46
SCAF4-205ENST00000472318 ZNF479Q96JC4 524 aa5.93□□□□□ -1.46
SCAF4-205ENST00000472318 CAPZA3Q96KX2 299 aa5.93□□□□□ -1.46
SCAF4-205ENST00000472318 SELENOSQ9BQE4 189 aa5.93□□□□□ -1.46
SCAF4-205ENST00000472318 CCM2Q9BSQ5 444 aa5.93□□□□□ -1.46
SCAF4-205ENST00000472318 LMF2Q9BU23 707 aaKnown RBP5.93□□□□□ -1.46
SCAF4-205ENST00000472318 FRMD8P1Q9BZ68 369 aaPredicted RBP5.93□□□□□ -1.46
SCAF4-205ENST00000472318 VCX3BQ9H321 246 aa5.93□□□□□ -1.46
SCAF4-205ENST00000472318 ESRP2Q9H6T0 727 aaKnown RBP5.93□□□□□ -1.46
SCAF4-205ENST00000472318 ZDHHC11Q9H8X9 412 aa5.93□□□□□ -1.46
SCAF4-205ENST00000472318 GSN-AS1Q9NRJ2 163 aa5.93□□□□□ -1.46
SCAF4-205ENST00000472318 PNO1Q9NRX1 252 aaKnown RBP5.93□□□□□ -1.46
SCAF4-205ENST00000472318 DEPPQ9NTK1 212 aa5.93□□□□□ -1.46
SCAF4-205ENST00000472318 RBM22Q9NW64 420 aaKnown RBP eCLIP5.93□□□□□ -1.466e-6■■□□□ 14.1
SCAF4-205ENST00000472318 CISD1Q9NZ45 108 aaKnown RBP5.93□□□□□ -1.46
SCAF4-205ENST00000472318 EMC3Q9P0I2 261 aa5.93□□□□□ -1.46
SCAF4-205ENST00000472318 B9D1Q9UPM9 204 aa5.93□□□□□ -1.46
SCAF4-205ENST00000472318 EIF3LQ9Y262 564 aaKnown RBP5.93□□□□□ -1.46
SCAF4-205ENST00000472318 B3GALT5Q9Y2C3 310 aa5.93□□□□□ -1.46
SCAF4-205ENST00000472318 KLF13Q9Y2Y9 288 aaPredicted RBP5.93□□□□□ -1.46
SCAF4-205ENST00000472318 ATG4BQ9Y4P1 393 aa5.93□□□□□ -1.46
SCAF4-205ENST00000472318 KLK4Q9Y5K2 254 aa5.93□□□□□ -1.46
SCAF4-205ENST00000472318 ATP6V1DQ9Y5K8 247 aa5.93□□□□□ -1.46
SCAF4-205ENST00000472318 PCLOQ9Y6V0 5065 aa5.93□□□□□ -1.46
SCAF4-205ENST00000472318 A0A1W2PPV4 95 aa5.92□□□□□ -1.46
SCAF4-205ENST00000472318 CD8B2A6NJW9 211 aa5.92□□□□□ -1.46
SCAF4-205ENST00000472318 SIGLEC16A6NMB1 481 aa5.92□□□□□ -1.46
SCAF4-205ENST00000472318 C9JVG2 144 aa5.92□□□□□ -1.46
SCAF4-205ENST00000472318 KLRC4-KLRK1H3BQV0 150 aa5.92□□□□□ -1.46
SCAF4-205ENST00000472318 GAPDHSO14556 408 aaPredicted RBP5.92□□□□□ -1.46
SCAF4-205ENST00000472318 OR10H2O60403 315 aa5.92□□□□□ -1.46
SCAF4-205ENST00000472318 ATP6AP2O75787 350 aa5.92□□□□□ -1.46
SCAF4-205ENST00000472318 IGHG3P01860 377 aa5.92□□□□□ -1.46
SCAF4-205ENST00000472318 B4GALT1P15291 398 aa5.92□□□□□ -1.46
SCAF4-205ENST00000472318 CHRNB2P17787 502 aa5.92□□□□□ -1.46
SCAF4-205ENST00000472318 UQCRC2P22695 453 aa5.92□□□□□ -1.46
SCAF4-205ENST00000472318 CA4P22748 312 aa5.92□□□□□ -1.46
SCAF4-205ENST00000472318 TUBG1P23258 451 aa5.92□□□□□ -1.46
SCAF4-205ENST00000472318 CMA1P23946 247 aa5.92□□□□□ -1.46
SCAF4-205ENST00000472318 SSTR1P30872 391 aa5.92□□□□□ -1.46
SCAF4-205ENST00000472318 RRM2P31350 389 aa5.92□□□□□ -1.46
SCAF4-205ENST00000472318 CEACAM8P31997 349 aaPredicted RBP5.92□□□□□ -1.46
SCAF4-205ENST00000472318 SHMT2P34897 504 aa5.92□□□□□ -1.46
SCAF4-205ENST00000472318 CYLC1P35663 651 aaPredicted RBP5.92□□□□□ -1.46
SCAF4-205ENST00000472318 SLC26A3P40879 764 aa5.92□□□□□ -1.46
SCAF4-205ENST00000472318 GPR4P46093 362 aa5.92□□□□□ -1.46
SCAF4-205ENST00000472318 RPL21P46778 160 aaKnown RBP5.92□□□□□ -1.46
SCAF4-205ENST00000472318 HLCSP50747 726 aa5.92□□□□□ -1.46
SCAF4-205ENST00000472318 ZNF136P52737 540 aa5.92□□□□□ -1.46
SCAF4-205ENST00000472318 HERV-K104P63124 156 aa5.92□□□□□ -1.46
SCAF4-205ENST00000472318 SARNPP82979 210 aaKnown RBP5.92□□□□□ -1.46
SCAF4-205ENST00000472318 GAGE2BQ13066 116 aa5.92□□□□□ -1.46
SCAF4-205ENST00000472318 PNOCQ13519 176 aa5.92□□□□□ -1.46
SCAF4-205ENST00000472318 HERC3Q15034 1050 aa5.92□□□□□ -1.46
SCAF4-205ENST00000472318 P2RY14Q15391 338 aa5.92□□□□□ -1.46
SCAF4-205ENST00000472318 ZNF260Q3ZCT1 412 aa5.92□□□□□ -1.46
SCAF4-205ENST00000472318 GAGE2EQ4V326 116 aa5.92□□□□□ -1.46
SCAF4-205ENST00000472318 ZNF658BQ4V348 819 aaPredicted RBP5.92□□□□□ -1.46
SCAF4-205ENST00000472318 CTSL3PQ5NE16 218 aa5.92□□□□□ -1.46
SCAF4-205ENST00000472318 LIPNQ5VXI9 398 aa5.92□□□□□ -1.46
SCAF4-205ENST00000472318 ATL3Q6DD88 541 aa5.92□□□□□ -1.46
SCAF4-205ENST00000472318 HIST2H2AA3Q6FI13 130 aa5.92□□□□□ -1.46
SCAF4-205ENST00000472318 GAGE2AQ6NT46 116 aa5.92□□□□□ -1.46
SCAF4-205ENST00000472318 FAM151BQ6UXP7 276 aa5.92□□□□□ -1.46
SCAF4-205ENST00000472318 KIAA1328Q86T90 577 aa5.92□□□□□ -1.46
SCAF4-205ENST00000472318 SERPINA11Q86U17 422 aa5.92□□□□□ -1.46
SCAF4-205ENST00000472318 NT5DC3Q86UY8 548 aa5.92□□□□□ -1.46
SCAF4-205ENST00000472318 RPS19BP1Q86WX3 136 aaKnown RBP5.92□□□□□ -1.46
SCAF4-205ENST00000472318 OR4K14Q8NGD5 310 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms