RNA–Protein interactions for RNA: ENST00000471744.1

SNX13-205, Transcript of sorting nexin 13, humanhuman

TSL 4

Gene SNX13, Length 454 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-205ENST00000471744 CST1P01037 141 aa13.31□□□□□ -0.28
SNX13-205ENST00000471744 F13BP05160 661 aa13.31□□□□□ -0.28
SNX13-205ENST00000471744 ITGA5P08648 1049 aa13.31□□□□□ -0.28
SNX13-205ENST00000471744 NR2C1P13056 603 aa13.31□□□□□ -0.28
SNX13-205ENST00000471744 CRYGSP22914 178 aa13.31□□□□□ -0.28
SNX13-205ENST00000471744 PAX7P23759 505 aa13.31□□□□□ -0.28
SNX13-205ENST00000471744 STK11Q15831 433 aa13.31□□□□□ -0.28
SNX13-205ENST00000471744 TIMM23BQ5SRD1 257 aa13.31□□□□□ -0.28
SNX13-205ENST00000471744 FAM205BPQ63HN1 556 aa13.31□□□□□ -0.28
SNX13-205ENST00000471744 YTHDF3Q7Z739 585 aaKnown RBP13.31□□□□□ -0.28
SNX13-205ENST00000471744 C20orf196Q8IYI0 205 aa13.31□□□□□ -0.28
SNX13-205ENST00000471744 ZNF295-AS1Q8N0V1 137 aa13.31□□□□□ -0.28
SNX13-205ENST00000471744 PAPD5Q8NDF8 572 aaKnown RBP13.31□□□□□ -0.28
SNX13-205ENST00000471744 OR13C2Q8NGS9 318 aa13.31□□□□□ -0.28
SNX13-205ENST00000471744 OR6N1Q8NGY5 312 aa13.31□□□□□ -0.28
SNX13-205ENST00000471744 OR51A7Q8NH64 312 aa13.31□□□□□ -0.28
SNX13-205ENST00000471744 MOSPD2Q8NHP6 518 aa13.31□□□□□ -0.28
SNX13-205ENST00000471744 ZNF566Q969W8 418 aa13.31□□□□□ -0.28
SNX13-205ENST00000471744 MUCL1Q96DR8 90 aa13.31□□□□□ -0.28
SNX13-205ENST00000471744 SLC25A44Q96H78 314 aaPredicted RBP13.31□□□□□ -0.28
SNX13-205ENST00000471744 BOD1Q96IK1 185 aa13.31□□□□□ -0.28
SNX13-205ENST00000471744 ALKBH3Q96Q83 286 aaPredicted RBP13.31□□□□□ -0.28
SNX13-205ENST00000471744 EMC6Q9BV81 110 aa13.31□□□□□ -0.28
SNX13-205ENST00000471744 TXNIPQ9H3M7 391 aa13.31□□□□□ -0.28
SNX13-205ENST00000471744 CCM2LQ9NUG4 571 aaPredicted RBP13.31□□□□□ -0.28
SNX13-205ENST00000471744 SAMHD1Q9Y3Z3 626 aaKnown RBP13.31□□□□□ -0.28
SNX13-205ENST00000471744 CADP27708 2225 aa13.3□□□□□ -0.28
SNX13-205ENST00000471744 UNC119BA6NIH7 251 aa13.3□□□□□ -0.28
SNX13-205ENST00000471744 OR5H1A6NKK0 313 aa13.3□□□□□ -0.28
SNX13-205ENST00000471744 A6NNC1 897 aa13.3□□□□□ -0.28
SNX13-205ENST00000471744 GNGT2O14610 69 aa13.3□□□□□ -0.28
SNX13-205ENST00000471744 CDC42EP2O14613 210 aa13.3□□□□□ -0.28
SNX13-205ENST00000471744 KLF4O43474 513 aa13.3□□□□□ -0.28
SNX13-205ENST00000471744 FKBP6O75344 327 aa13.3□□□□□ -0.28
SNX13-205ENST00000471744 UPK3AO75631 287 aa13.3□□□□□ -0.28
SNX13-205ENST00000471744 RAD51DO75771 328 aa13.3□□□□□ -0.28
SNX13-205ENST00000471744 CCNB2O95067 398 aa13.3□□□□□ -0.28
SNX13-205ENST00000471744 NDUFB2O95178 105 aa13.3□□□□□ -0.28
SNX13-205ENST00000471744 IGHG1P01857 330 aa13.3□□□□□ -0.28
SNX13-205ENST00000471744 IGHMP01871 453 aa13.3□□□□□ -0.28
SNX13-205ENST00000471744 FPR3P25089 353 aa13.3□□□□□ -0.28
SNX13-205ENST00000471744 HOXC12P31275 282 aa13.3□□□□□ -0.28
SNX13-205ENST00000471744 CSNK1A1P48729 337 aa13.3□□□□□ -0.28
SNX13-205ENST00000471744 ROR2Q01974 943 aaKnown RBP13.3□□□□□ -0.28
SNX13-205ENST00000471744 TLE4Q04727 773 aa13.3□□□□□ -0.28
SNX13-205ENST00000471744 CAMK2DQ13557 499 aa13.3□□□□□ -0.28
SNX13-205ENST00000471744 LAPTM4AQ15012 233 aa13.3□□□□□ -0.28
SNX13-205ENST00000471744 ACKR1Q16570 336 aa13.3□□□□□ -0.28
SNX13-205ENST00000471744 ANKRD34AQ69YU3 496 aa13.3□□□□□ -0.28
SNX13-205ENST00000471744 C1orf94Q6P1W5 598 aa13.3□□□□□ -0.28
SNX13-205ENST00000471744 OR4C15Q8NGM1 316 aa13.3□□□□□ -0.28
SNX13-205ENST00000471744 GNPDA2Q8TDQ7 276 aa13.3□□□□□ -0.28
SNX13-205ENST00000471744 MUS81Q96NY9 551 aa13.3□□□□□ -0.28
SNX13-205ENST00000471744 TNFRSF13CQ96RJ3 184 aa13.3□□□□□ -0.28
SNX13-205ENST00000471744 OBP2BQ9NPH6 170 aa13.3□□□□□ -0.28
SNX13-205ENST00000471744 SIGLEC7Q9Y286 467 aa13.3□□□□□ -0.28
SNX13-205ENST00000471744 NOTCH2Q04721 2471 aa13.29□□□□□ -0.28
SNX13-205ENST00000471744 A6NIZ1 184 aa13.29□□□□□ -0.28
SNX13-205ENST00000471744 ENTPD5O75356 428 aa13.29□□□□□ -0.28
SNX13-205ENST00000471744 HOXB1P14653 301 aaPredicted RBP13.29□□□□□ -0.28
SNX13-205ENST00000471744 RPL4P36578 427 aaKnown RBP13.29□□□□□ -0.28
SNX13-205ENST00000471744 CTXN1P60606 82 aa13.29□□□□□ -0.28
SNX13-205ENST00000471744 RAP1BP61224 184 aa13.29□□□□□ -0.28
SNX13-205ENST00000471744 RPL27P61353 136 aaKnown RBP13.29□□□□□ -0.28
SNX13-205ENST00000471744 RAP1AP62834 184 aa13.29□□□□□ -0.28
SNX13-205ENST00000471744 TSPAN31Q12999 210 aa13.29□□□□□ -0.28
SNX13-205ENST00000471744 FHL1Q13642 323 aa13.29□□□□□ -0.28
SNX13-205ENST00000471744 MELKQ14680 651 aa13.29□□□□□ -0.28
SNX13-205ENST00000471744 TSC22D1Q15714 1073 aa13.29□□□□□ -0.28
SNX13-205ENST00000471744 GABRA6Q16445 453 aa13.29□□□□□ -0.28
SNX13-205ENST00000471744 CARD17Q5XLA6 110 aa13.29□□□□□ -0.28
SNX13-205ENST00000471744 RPL13AP3Q6NVV1 102 aa13.29□□□□□ -0.28
SNX13-205ENST00000471744 KLHL24Q6TFL4 600 aa13.29□□□□□ -0.28
SNX13-205ENST00000471744 ZER1Q7Z7L7 766 aa13.29□□□□□ -0.28
SNX13-205ENST00000471744 MEX3DQ86XN8 651 aaKnown RBP13.29□□□□□ -0.28
SNX13-205ENST00000471744 LRRC75AQ8NAA5 344 aa13.29□□□□□ -0.28
SNX13-205ENST00000471744 FNDC8Q8TC99 324 aa13.29□□□□□ -0.28
SNX13-205ENST00000471744 ASB10Q8WXI3 467 aa13.29□□□□□ -0.28
SNX13-205ENST00000471744 ZC3HAV1LQ96H79 300 aaKnown RBP13.29□□□□□ -0.28
SNX13-205ENST00000471744 RAB3IPQ96QF0 476 aaPredicted RBP13.29□□□□□ -0.28
SNX13-205ENST00000471744 POLDIP3Q9BY77 421 aaKnown RBP13.29□□□□□ -0.28
SNX13-205ENST00000471744 ULBP2Q9BZM5 246 aa13.29□□□□□ -0.28
SNX13-205ENST00000471744 CRLF2Q9HC73 371 aa13.29□□□□□ -0.28
SNX13-205ENST00000471744 GPR35Q9HC97 309 aa13.29□□□□□ -0.28
SNX13-205ENST00000471744 MOV10Q9HCE1 1003 aaKnown RBP13.29□□□□□ -0.28
SNX13-205ENST00000471744 GLTPQ9NZD2 209 aa13.29□□□□□ -0.28
SNX13-205ENST00000471744 DNAJB9Q9UBS3 223 aa13.29□□□□□ -0.28
SNX13-205ENST00000471744 AMDHD2Q9Y303 409 aa13.29□□□□□ -0.28
SNX13-205ENST00000471744 MAGED1Q9Y5V3 778 aaPredicted RBP13.29□□□□□ -0.28
SNX13-205ENST00000471744 ABCA12Q86UK0 2595 aa13.29□□□□□ -0.28
SNX13-205ENST00000471744 ROS1P08922 2347 aa13.28□□□□□ -0.28
SNX13-205ENST00000471744 AKAP6Q13023 2319 aa13.28□□□□□ -0.28
SNX13-205ENST00000471744 FAM221AA4D161 298 aa13.28□□□□□ -0.28
SNX13-205ENST00000471744 ARRDC5A6NEK1 342 aa13.28□□□□□ -0.28
SNX13-205ENST00000471744 M0R3G1 203 aa13.28□□□□□ -0.28
SNX13-205ENST00000471744 PTP4A3O75365 173 aa13.28□□□□□ -0.28
SNX13-205ENST00000471744 DEAF1O75398 565 aaPredicted RBP13.28□□□□□ -0.28
SNX13-205ENST00000471744 CD14P08571 375 aa13.28□□□□□ -0.28
SNX13-205ENST00000471744 PGA4P0DJD7 388 aa13.28□□□□□ -0.28
SNX13-205ENST00000471744 PGA3P0DJD8 388 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms