RNA–Protein interactions for RNA: ENST00000468117.1

TMEM53-207, Transcript of transmembrane protein 53, humanhuman

TSL 3

Gene TMEM53, Length 2,017 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-207ENST00000468117 GABARAPO95166 117 aa18.44■□□□□ 0.54
TMEM53-207ENST00000468117 SCG5P05408 212 aa18.44■□□□□ 0.54
TMEM53-207ENST00000468117 NAA10P41227 235 aaPredicted RBP18.44■□□□□ 0.54
TMEM53-207ENST00000468117 HCCSP53701 268 aa18.44■□□□□ 0.54
TMEM53-207ENST00000468117 LSM3P62310 102 aaKnown RBP18.44■□□□□ 0.54
TMEM53-207ENST00000468117 HSF1Q00613 529 aa18.44■□□□□ 0.54
TMEM53-207ENST00000468117 POU4F2Q12837 409 aa18.44■□□□□ 0.54
TMEM53-207ENST00000468117 GGTLC2Q14390 218 aa18.44■□□□□ 0.54
TMEM53-207ENST00000468117 SLC25A25Q6KCM7 469 aa18.44■□□□□ 0.54
TMEM53-207ENST00000468117 PXKQ7Z7A4 578 aa18.44■□□□□ 0.54
TMEM53-207ENST00000468117 ADCK1Q86TW2 530 aa18.44■□□□□ 0.54
TMEM53-207ENST00000468117 RPL3LQ92901 407 aaKnown RBP18.44■□□□□ 0.54
TMEM53-207ENST00000468117 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP18.44■□□□□ 0.54
TMEM53-207ENST00000468117 ZNF703Q9H7S9 590 aaPredicted RBP18.44■□□□□ 0.54
TMEM53-207ENST00000468117 MED29Q9NX70 200 aa18.44■□□□□ 0.54
TMEM53-207ENST00000468117 PTTG2Q9NZH5 202 aa18.44■□□□□ 0.54
TMEM53-207ENST00000468117 APC2O95996 2303 aa18.44■□□□□ 0.54
TMEM53-207ENST00000468117 DAPL1A0PJW8 107 aa18.44■□□□□ 0.54
TMEM53-207ENST00000468117 PRSS37A4D1T9 235 aa18.44■□□□□ 0.54
TMEM53-207ENST00000468117 NPIPA5E9PKD4 350 aa18.44■□□□□ 0.54
TMEM53-207ENST00000468117 H0YC42 278 aa18.44■□□□□ 0.54
TMEM53-207ENST00000468117 EFSO43281 561 aa18.44■□□□□ 0.54
TMEM53-207ENST00000468117 NME2P1O60361 137 aa18.44■□□□□ 0.54
TMEM53-207ENST00000468117 PMS2P2O95744 297 aa18.44■□□□□ 0.54
TMEM53-207ENST00000468117 TFP02787 698 aa18.44■□□□□ 0.54
TMEM53-207ENST00000468117 NME2P22392 152 aa18.44■□□□□ 0.54
TMEM53-207ENST00000468117 SLC35A1P78382 337 aa18.44■□□□□ 0.54
TMEM53-207ENST00000468117 AQP6Q13520 282 aa18.44■□□□□ 0.54
TMEM53-207ENST00000468117 CRTC2Q53ET0 693 aaPredicted RBP18.44■□□□□ 0.54
TMEM53-207ENST00000468117 SLC35D2Q76EJ3 337 aa18.44■□□□□ 0.54
TMEM53-207ENST00000468117 GPAT4Q86UL3 456 aa18.44■□□□□ 0.54
TMEM53-207ENST00000468117 WDFY1Q8IWB7 410 aa18.44■□□□□ 0.54
TMEM53-207ENST00000468117 ZNF485Q8NCK3 441 aa18.44■□□□□ 0.54
TMEM53-207ENST00000468117 TM9SF4Q92544 642 aa18.44■□□□□ 0.54
TMEM53-207ENST00000468117 HAS2Q92819 552 aa18.44■□□□□ 0.54
TMEM53-207ENST00000468117 TXNDC15Q96J42 360 aa18.44■□□□□ 0.54
TMEM53-207ENST00000468117 SFXN2Q96NB2 322 aa18.44■□□□□ 0.54
TMEM53-207ENST00000468117 CNN2Q99439 309 aaKnown RBP18.44■□□□□ 0.54
TMEM53-207ENST00000468117 DCUN1D5Q9BTE7 237 aa18.44■□□□□ 0.54
TMEM53-207ENST00000468117 SCNM1Q9BWG6 230 aa18.44■□□□□ 0.54
TMEM53-207ENST00000468117 OR2B2Q9GZK3 357 aa18.44■□□□□ 0.54
TMEM53-207ENST00000468117 NUAK2Q9H093 628 aa18.44■□□□□ 0.54
TMEM53-207ENST00000468117 FANCFQ9NPI8 374 aa18.44■□□□□ 0.54
TMEM53-207ENST00000468117 NPIPA1Q9UND3 350 aa18.44■□□□□ 0.54
TMEM53-207ENST00000468117 MRPS18CQ9Y3D5 142 aaKnown RBP18.44■□□□□ 0.54
TMEM53-207ENST00000468117 MGAQ8IWI9 3026 aa18.43■□□□□ 0.54
TMEM53-207ENST00000468117 A0A1W2PPW3 197 aa18.43■□□□□ 0.54
TMEM53-207ENST00000468117 KLK10O43240 276 aa18.43■□□□□ 0.54
TMEM53-207ENST00000468117 SELENOFO60613 162 aa18.43■□□□□ 0.54
TMEM53-207ENST00000468117 RAMP1O60894 148 aa18.43■□□□□ 0.54
TMEM53-207ENST00000468117 BCL10O95999 233 aa18.43■□□□□ 0.54
TMEM53-207ENST00000468117 GADD45AP24522 165 aa18.43■□□□□ 0.54
TMEM53-207ENST00000468117 CLDN20P56880 219 aa18.43■□□□□ 0.54
TMEM53-207ENST00000468117 SSX1Q16384 188 aa18.43■□□□□ 0.54
TMEM53-207ENST00000468117 TMEM225Q6GV28 225 aa18.43■□□□□ 0.54
TMEM53-207ENST00000468117 KLHL36Q8N4N3 616 aa18.43■□□□□ 0.54
TMEM53-207ENST00000468117 POMGNT2Q8NAT1 580 aa18.43■□□□□ 0.54
TMEM53-207ENST00000468117 ZNF511Q8NB15 262 aa18.43■□□□□ 0.54
TMEM53-207ENST00000468117 ADPRHL1Q8NDY3 354 aa18.43■□□□□ 0.54
TMEM53-207ENST00000468117 OR2T4Q8NH00 348 aa18.43■□□□□ 0.54
TMEM53-207ENST00000468117 KCNE4Q8WWG9 221 aa18.43■□□□□ 0.54
TMEM53-207ENST00000468117 ASB10Q8WXI3 467 aa18.43■□□□□ 0.54
TMEM53-207ENST00000468117 KLHL15Q96M94 604 aa18.43■□□□□ 0.54
TMEM53-207ENST00000468117 ALG8Q9BVK2 526 aa18.43■□□□□ 0.54
TMEM53-207ENST00000468117 TTTY12Q9BZ98 90 aa18.43■□□□□ 0.54
TMEM53-207ENST00000468117 KLF13Q9Y2Y9 288 aaPredicted RBP18.43■□□□□ 0.54
TMEM53-207ENST00000468117 ACACAQ13085 2346 aa18.42■□□□□ 0.54
TMEM53-207ENST00000468117 A0A0J9YW62 118 aa18.42■□□□□ 0.54
TMEM53-207ENST00000468117 FAM166BA8MTA8 275 aa18.42■□□□□ 0.54
TMEM53-207ENST00000468117 CCRL2O00421 344 aa18.42■□□□□ 0.54
TMEM53-207ENST00000468117 TNFSF11O14788 317 aa18.42■□□□□ 0.54
TMEM53-207ENST00000468117 CD46P15529 392 aa18.42■□□□□ 0.54
TMEM53-207ENST00000468117 DAP3P51398 398 aaKnown RBP18.42■□□□□ 0.54
TMEM53-207ENST00000468117 MLLT11Q13015 90 aaPredicted RBP18.42■□□□□ 0.54
TMEM53-207ENST00000468117 RFLNBQ8N5W9 214 aa18.42■□□□□ 0.54
TMEM53-207ENST00000468117 TSC22D3Q99576 134 aa18.42■□□□□ 0.54
TMEM53-207ENST00000468117 TIMP4Q99727 224 aa18.42■□□□□ 0.54
TMEM53-207ENST00000468117 ARHGAP9Q9BRR9 750 aa18.42■□□□□ 0.54
TMEM53-207ENST00000468117 RNF32Q9H0A6 362 aa18.42■□□□□ 0.54
TMEM53-207ENST00000468117 ISG20L2Q9H9L3 353 aaKnown RBP18.42■□□□□ 0.54
TMEM53-207ENST00000468117 B4GALT7Q9UBV7 327 aa18.42■□□□□ 0.54
TMEM53-207ENST00000468117 CSAG2Q9Y5P2 127 aa18.42■□□□□ 0.54
TMEM53-207ENST00000468117 A0A1W2PQL4 384 aaPredicted RBP18.42■□□□□ 0.54
TMEM53-207ENST00000468117 CDK2AP1O14519 115 aa18.42■□□□□ 0.54
TMEM53-207ENST00000468117 CELA3AP09093 270 aa18.42■□□□□ 0.54
TMEM53-207ENST00000468117 STARP49675 285 aa18.42■□□□□ 0.54
TMEM53-207ENST00000468117 MEOX1P50221 254 aa18.42■□□□□ 0.54
TMEM53-207ENST00000468117 EEF1A1P5Q5VTE0 462 aa18.42■□□□□ 0.54
TMEM53-207ENST00000468117 SYT14Q8NB59 555 aa18.42■□□□□ 0.54
TMEM53-207ENST00000468117 SPRYD4Q8WW59 207 aaPredicted RBP18.42■□□□□ 0.54
TMEM53-207ENST00000468117 EMC6Q9BV81 110 aa18.42■□□□□ 0.54
TMEM53-207ENST00000468117 RACGAP1Q9H0H5 632 aa18.42■□□□□ 0.54
TMEM53-207ENST00000468117 VSX1Q9NZR4 365 aaPredicted RBP18.42■□□□□ 0.54
TMEM53-207ENST00000468117 MOKQ9UQ07 419 aa18.42■□□□□ 0.54
TMEM53-207ENST00000468117 CACNA1CQ13936 2221 aa18.41■□□□□ 0.54
TMEM53-207ENST00000468117 PNMA8CA0A1B0GUJ8 204 aa18.41■□□□□ 0.54
TMEM53-207ENST00000468117 SLC22A23A1A5C7 686 aa18.41■□□□□ 0.54
TMEM53-207ENST00000468117 NPIPB13A6NJU9 1138 aa18.41■□□□□ 0.54
TMEM53-207ENST00000468117 AQP7P3A6NL99 342 aa18.41■□□□□ 0.54
TMEM53-207ENST00000468117 NPIPB4C9JG80 1138 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms