RNA–Protein interactions for RNA: ENST00000468040.2

SNIP1-202, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 5

Gene SNIP1, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-202ENST00000468040 ESRRGP62508 458 aa13.48□□□□□ -0.25
SNIP1-202ENST00000468040 RAP1AP62834 184 aa13.48□□□□□ -0.25
SNIP1-202ENST00000468040 ERVK-25P63136 954 aa13.48□□□□□ -0.25
SNIP1-202ENST00000468040 TOP3AQ13472 1001 aaPredicted RBP13.48□□□□□ -0.25
SNIP1-202ENST00000468040 CLEC12AQ5QGZ9 265 aa13.48□□□□□ -0.25
SNIP1-202ENST00000468040 ARMC4Q5T2S8 1044 aa13.48□□□□□ -0.25
SNIP1-202ENST00000468040 NIPAL3Q6P499 406 aa13.48□□□□□ -0.25
SNIP1-202ENST00000468040 VWA1Q6PCB0 445 aa13.48□□□□□ -0.25
SNIP1-202ENST00000468040 XKRXQ6PP77 449 aa13.48□□□□□ -0.25
SNIP1-202ENST00000468040 FAM122BQ7Z309 247 aa13.48□□□□□ -0.25
SNIP1-202ENST00000468040 BTLAQ7Z6A9 289 aa13.48□□□□□ -0.25
SNIP1-202ENST00000468040 PACRGLQ8N7B6 248 aa13.48□□□□□ -0.25
SNIP1-202ENST00000468040 OR2T33Q8NG76 320 aa13.48□□□□□ -0.25
SNIP1-202ENST00000468040 ASB10Q8WXI3 467 aa13.48□□□□□ -0.25
SNIP1-202ENST00000468040 SLC25A44Q96H78 314 aaPredicted RBP13.48□□□□□ -0.25
SNIP1-202ENST00000468040 TXNDC15Q96J42 360 aa13.48□□□□□ -0.25
SNIP1-202ENST00000468040 ZNF570Q96NI8 536 aa13.48□□□□□ -0.25
SNIP1-202ENST00000468040 TSPAN32Q96QS1 320 aa13.48□□□□□ -0.25
SNIP1-202ENST00000468040 OR2M2Q96R28 347 aa13.48□□□□□ -0.25
SNIP1-202ENST00000468040 TSSK6Q9BXA6 273 aa13.48□□□□□ -0.25
SNIP1-202ENST00000468040 TEX12Q9BXU0 123 aa13.48□□□□□ -0.25
SNIP1-202ENST00000468040 PLA2G12AQ9BZM1 189 aa13.48□□□□□ -0.25
SNIP1-202ENST00000468040 ENKD1Q9H0I2 346 aa13.48□□□□□ -0.25
SNIP1-202ENST00000468040 TMEFF2Q9UIK5 374 aaPredicted RBP13.48□□□□□ -0.25
SNIP1-202ENST00000468040 CENPBD1B2RD01 187 aa13.47□□□□□ -0.25
SNIP1-202ENST00000468040 IMPA2O14732 288 aa13.47□□□□□ -0.25
SNIP1-202ENST00000468040 MSTNO14793 375 aa13.47□□□□□ -0.25
SNIP1-202ENST00000468040 SMNDC1O75940 238 aaKnown RBP eCLIP13.47□□□□□ -0.25
SNIP1-202ENST00000468040 CNOT4O95628 575 aaKnown RBP13.47□□□□□ -0.25
SNIP1-202ENST00000468040 PPP1R3DO95685 299 aa13.47□□□□□ -0.25
SNIP1-202ENST00000468040 TXNDC12O95881 172 aa13.47□□□□□ -0.25
SNIP1-202ENST00000468040 CGAP01215 116 aa13.47□□□□□ -0.25
SNIP1-202ENST00000468040 IGHG1P01857 330 aa13.47□□□□□ -0.25
SNIP1-202ENST00000468040 POU1F1P28069 291 aa13.47□□□□□ -0.25
SNIP1-202ENST00000468040 NOS3P29474 1203 aa13.47□□□□□ -0.25
SNIP1-202ENST00000468040 NTF4P34130 210 aa13.47□□□□□ -0.25
SNIP1-202ENST00000468040 SELENOPP49908 381 aa13.47□□□□□ -0.25
SNIP1-202ENST00000468040 MELKQ14680 651 aa13.47□□□□□ -0.25
SNIP1-202ENST00000468040 LRRC36Q1X8D7 754 aa13.47□□□□□ -0.25
SNIP1-202ENST00000468040 SLC25A35Q3KQZ1 300 aa13.47□□□□□ -0.25
SNIP1-202ENST00000468040 OGFRL1Q5TC84 451 aaPredicted RBP13.47□□□□□ -0.25
SNIP1-202ENST00000468040 LPCAT4Q643R3 524 aa13.47□□□□□ -0.25
SNIP1-202ENST00000468040 SLC27A4Q6P1M0 643 aa13.47□□□□□ -0.25
SNIP1-202ENST00000468040 TFAP2EQ6VUC0 442 aa13.47□□□□□ -0.25
SNIP1-202ENST00000468040 MRGPRGQ86SM5 289 aa13.47□□□□□ -0.25
SNIP1-202ENST00000468040 ZNF808Q8N4W9 903 aaPredicted RBP13.47□□□□□ -0.25
SNIP1-202ENST00000468040 ARIH2OSQ8N7S6 290 aa13.47□□□□□ -0.25
SNIP1-202ENST00000468040 POMGNT2Q8NAT1 580 aa13.47□□□□□ -0.25
SNIP1-202ENST00000468040 OR8D4Q8NGM9 314 aa13.47□□□□□ -0.25
SNIP1-202ENST00000468040 ZNF519Q8TB69 540 aa13.47□□□□□ -0.25
SNIP1-202ENST00000468040 CA5BP1Q8WTZ4 195 aa13.47□□□□□ -0.25
SNIP1-202ENST00000468040 ZNF566Q969W8 418 aa13.47□□□□□ -0.25
SNIP1-202ENST00000468040 ERMAPQ96PL5 475 aaPredicted RBP13.47□□□□□ -0.25
SNIP1-202ENST00000468040 EMC6Q9BV81 110 aa13.47□□□□□ -0.25
SNIP1-202ENST00000468040 GABARAPL3Q9BY60 117 aa13.47□□□□□ -0.25
SNIP1-202ENST00000468040 SLCO5A1Q9H2Y9 848 aa13.47□□□□□ -0.25
SNIP1-202ENST00000468040 VCXQ9H320 206 aa13.47□□□□□ -0.25
SNIP1-202ENST00000468040 ZNF346Q9UL40 294 aaKnown RBP13.47□□□□□ -0.25
SNIP1-202ENST00000468040 ADAM18Q9Y3Q7 739 aa13.47□□□□□ -0.25
SNIP1-202ENST00000468040 IER3IP1Q9Y5U9 82 aa13.47□□□□□ -0.25
SNIP1-202ENST00000468040 TEX13CA0A0J9YWL9 993 aa13.46□□□□□ -0.25
SNIP1-202ENST00000468040 EEF1E1-BLOC1S5C9J1V9 151 aa13.46□□□□□ -0.25
SNIP1-202ENST00000468040 BHLHE40O14503 412 aa13.46□□□□□ -0.25
SNIP1-202ENST00000468040 XKRYO14609 159 aa13.46□□□□□ -0.25
SNIP1-202ENST00000468040 EEF1E1O43324 174 aaKnown RBP13.46□□□□□ -0.25
SNIP1-202ENST00000468040 ZG16O60844 167 aa13.46□□□□□ -0.25
SNIP1-202ENST00000468040 MITFO75030 526 aaPredicted RBP13.46□□□□□ -0.25
SNIP1-202ENST00000468040 AGFG2O95081 481 aa13.46□□□□□ -0.25
SNIP1-202ENST00000468040 IGFBP1P08833 259 aaPredicted RBP13.46□□□□□ -0.25
SNIP1-202ENST00000468040 NR2C1P13056 603 aa13.46□□□□□ -0.25
SNIP1-202ENST00000468040 ACADSP16219 412 aa13.46□□□□□ -0.25
SNIP1-202ENST00000468040 ACVR1BP36896 505 aa13.46□□□□□ -0.25
SNIP1-202ENST00000468040 CRISP1P54107 249 aa13.46□□□□□ -0.25
SNIP1-202ENST00000468040 KRR1Q13601 381 aaKnown RBP13.46□□□□□ -0.25
SNIP1-202ENST00000468040 FBXW9Q5XUX1 488 aa13.46□□□□□ -0.25
SNIP1-202ENST00000468040 ABHD12BQ7Z5M8 362 aaPredicted RBP13.46□□□□□ -0.25
SNIP1-202ENST00000468040 ADCK1Q86TW2 530 aa13.46□□□□□ -0.25
SNIP1-202ENST00000468040 LIX1LQ8IVB5 337 aa13.46□□□□□ -0.25
SNIP1-202ENST00000468040 TMEM123Q8N131 208 aa13.46□□□□□ -0.25
SNIP1-202ENST00000468040 LNX2Q8N448 690 aa13.46□□□□□ -0.25
SNIP1-202ENST00000468040 LILRB4Q8NHJ6 448 aa13.46□□□□□ -0.25
SNIP1-202ENST00000468040 FNDC8Q8TC99 324 aa13.46□□□□□ -0.25
SNIP1-202ENST00000468040 LRR1Q96L50 414 aa13.46□□□□□ -0.25
SNIP1-202ENST00000468040 Q96M85 177 aa13.46□□□□□ -0.25
SNIP1-202ENST00000468040 RDH12Q96NR8 316 aa13.46□□□□□ -0.25
SNIP1-202ENST00000468040 SLC29A1Q99808 456 aa13.46□□□□□ -0.25
SNIP1-202ENST00000468040 LINC00470Q9BZP3 86 aa13.46□□□□□ -0.25
SNIP1-202ENST00000468040 MYO7BQ6PIF6 2116 aa13.45□□□□□ -0.26
SNIP1-202ENST00000468040 NCOA6Q14686 2063 aaPredicted RBP13.45□□□□□ -0.26
SNIP1-202ENST00000468040 AHCYL1O43865 530 aa13.45□□□□□ -0.26
SNIP1-202ENST00000468040 TRMUO75648 421 aaKnown RBP13.45□□□□□ -0.26
SNIP1-202ENST00000468040 KRT33AO76009 404 aa13.45□□□□□ -0.26
SNIP1-202ENST00000468040 PGA4P0DJD7 388 aa13.45□□□□□ -0.26
SNIP1-202ENST00000468040 PGA3P0DJD8 388 aa13.45□□□□□ -0.26
SNIP1-202ENST00000468040 GRK5P34947 590 aa13.45□□□□□ -0.26
SNIP1-202ENST00000468040 GIPRP48546 466 aa13.45□□□□□ -0.26
SNIP1-202ENST00000468040 CSNK1A1P48729 337 aa13.45□□□□□ -0.26
SNIP1-202ENST00000468040 CLRN1P58418 232 aa13.45□□□□□ -0.26
SNIP1-202ENST00000468040 NPRL3Q12980 569 aa13.45□□□□□ -0.26
SNIP1-202ENST00000468040 CAMK2DQ13557 499 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms