RNA–Protein interactions for RNA: ENST00000466171.1

CCDC93-205, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-205ENST00000466171 MGRN1O60291 552 aa1.33□□□□□ -2.2
CCDC93-205ENST00000466171 ZNF861PO60384 105 aa1.33□□□□□ -2.2
CCDC93-205ENST00000466171 CA11O75493 328 aa1.33□□□□□ -2.2
CCDC93-205ENST00000466171 C1orf105O95561 183 aa1.33□□□□□ -2.2
CCDC93-205ENST00000466171 TMEM50AO95807 157 aa1.33□□□□□ -2.2
CCDC93-205ENST00000466171 FGGP02679 453 aa1.33□□□□□ -2.2
CCDC93-205ENST00000466171 SERPIND1P05546 499 aa1.33□□□□□ -2.2
CCDC93-205ENST00000466171 IGHV4-34P06331 123 aa1.33□□□□□ -2.2
CCDC93-205ENST00000466171 PPIAL4FP0DN26 164 aa1.33□□□□□ -2.2
CCDC93-205ENST00000466171 TCN1P20061 433 aaPredicted RBP1.33□□□□□ -2.2
CCDC93-205ENST00000466171 CNR1P21554 472 aa1.33□□□□□ -2.2
CCDC93-205ENST00000466171 KITLGP21583 273 aa1.33□□□□□ -2.2
CCDC93-205ENST00000466171 CCNE1P24864 410 aa1.33□□□□□ -2.2
CCDC93-205ENST00000466171 IFNA8P32881 189 aa1.33□□□□□ -2.2
CCDC93-205ENST00000466171 FDFT1P37268 417 aa1.33□□□□□ -2.2
CCDC93-205ENST00000466171 SLC26A3P40879 764 aa1.33□□□□□ -2.2
CCDC93-205ENST00000466171 RPS10P46783 165 aaKnown RBP1.33□□□□□ -2.2
CCDC93-205ENST00000466171 LINC00315P59091 139 aa1.33□□□□□ -2.2
CCDC93-205ENST00000466171 PLP1P60201 277 aa1.33□□□□□ -2.2
CCDC93-205ENST00000466171 ERVK-25P63136 954 aa1.33□□□□□ -2.2
CCDC93-205ENST00000466171 KCNJ2P63252 427 aa1.33□□□□□ -2.2
CCDC93-205ENST00000466171 BST2Q10589 180 aaKnown RBP1.33□□□□□ -2.2
CCDC93-205ENST00000466171 KIAA0087Q14695 138 aa1.33□□□□□ -2.2
CCDC93-205ENST00000466171 PPP1R7Q15435 360 aa1.33□□□□□ -2.2
CCDC93-205ENST00000466171 CYTH1Q15438 398 aa1.33□□□□□ -2.2
CCDC93-205ENST00000466171 ZNF77Q15935 545 aa1.33□□□□□ -2.2
CCDC93-205ENST00000466171 DGUOKQ16854 277 aa1.33□□□□□ -2.2
CCDC93-205ENST00000466171 ZBED5Q49AG3 693 aa1.33□□□□□ -2.2
CCDC93-205ENST00000466171 CTRB2Q6GPI1 263 aa1.33□□□□□ -2.2
CCDC93-205ENST00000466171 TRIM40Q6P9F5 258 aa1.33□□□□□ -2.2
CCDC93-205ENST00000466171 ZNF836Q6ZNA1 936 aa1.33□□□□□ -2.2
CCDC93-205ENST00000466171 ACP7Q6ZNF0 438 aa1.33□□□□□ -2.2
CCDC93-205ENST00000466171 EGFL6Q8IUX8 553 aa1.33□□□□□ -2.2
CCDC93-205ENST00000466171 PIANPQ8IYJ0 282 aa1.33□□□□□ -2.2
CCDC93-205ENST00000466171 PUSL1Q8N0Z8 303 aaKnown RBP1.33□□□□□ -2.2
CCDC93-205ENST00000466171 ZNF561Q8N587 486 aa1.33□□□□□ -2.2
CCDC93-205ENST00000466171 FAM71E2Q8N5Q1 922 aa1.33□□□□□ -2.2
CCDC93-205ENST00000466171 Q8N9W7 124 aa1.33□□□□□ -2.2
CCDC93-205ENST00000466171 TRPV1Q8NER1 839 aa1.33□□□□□ -2.2
CCDC93-205ENST00000466171 OR56B2PQ8NGI1 322 aa1.33□□□□□ -2.2
CCDC93-205ENST00000466171 KCNG3Q8TAE7 436 aa1.33□□□□□ -2.2
CCDC93-205ENST00000466171 SLC22A8Q8TCC7 542 aa1.33□□□□□ -2.2
CCDC93-205ENST00000466171 SLC2A14Q8TDB8 520 aa1.33□□□□□ -2.2
CCDC93-205ENST00000466171 SDR42E1Q8WUS8 393 aa1.33□□□□□ -2.2
CCDC93-205ENST00000466171 ACOT11Q8WXI4 607 aaPredicted RBP1.33□□□□□ -2.2
CCDC93-205ENST00000466171 TMEM158Q8WZ71 300 aa1.33□□□□□ -2.2
CCDC93-205ENST00000466171 CNDP1Q96KN2 507 aa1.33□□□□□ -2.2
CCDC93-205ENST00000466171 NRTNQ99748 197 aa1.33□□□□□ -2.2
CCDC93-205ENST00000466171 TMEM246Q9BRR3 403 aa1.33□□□□□ -2.2
CCDC93-205ENST00000466171 CENPKQ9BS16 269 aa1.33□□□□□ -2.2
CCDC93-205ENST00000466171 RIOK2Q9BVS4 552 aaKnown RBP1.33□□□□□ -2.2
CCDC93-205ENST00000466171 FAIM2Q9BWQ8 316 aa1.33□□□□□ -2.2
CCDC93-205ENST00000466171 OR11A1Q9GZK7 315 aa1.33□□□□□ -2.2
CCDC93-205ENST00000466171 FAM192AQ9GZU8 254 aa1.33□□□□□ -2.2
CCDC93-205ENST00000466171 MFFQ9GZY8 342 aa1.33□□□□□ -2.2
CCDC93-205ENST00000466171 SRMSQ9H3Y6 488 aa1.33□□□□□ -2.2
CCDC93-205ENST00000466171 NIPAL2Q9H841 368 aa1.33□□□□□ -2.2
CCDC93-205ENST00000466171 NT5MQ9NPB1 228 aa1.33□□□□□ -2.2
CCDC93-205ENST00000466171 SLCO1B3Q9NPD5 702 aa1.33□□□□□ -2.2
CCDC93-205ENST00000466171 GLRX2Q9NS18 164 aa1.33□□□□□ -2.2
CCDC93-205ENST00000466171 SLC25A37Q9NYZ2 338 aa1.33□□□□□ -2.2
CCDC93-205ENST00000466171 SPATA7Q9P0W8 599 aa1.33□□□□□ -2.2
CCDC93-205ENST00000466171 CLCF1Q9UBD9 225 aa1.33□□□□□ -2.2
CCDC93-205ENST00000466171 NUFIP1Q9UHK0 495 aaKnown RBP1.33□□□□□ -2.2
CCDC93-205ENST00000466171 ZNF225Q9UK10 706 aa1.33□□□□□ -2.2
CCDC93-205ENST00000466171 NEUROG3Q9Y4Z2 214 aa1.33□□□□□ -2.2
CCDC93-205ENST00000466171 CSDC2Q9Y534 153 aaKnown RBP1.33□□□□□ -2.2
CCDC93-205ENST00000466171 PEX16Q9Y5Y5 336 aa1.33□□□□□ -2.2
CCDC93-205ENST00000466171 NACAE9PAV3 2078 aa1.33□□□□□ -2.2
CCDC93-205ENST00000466171 A0A1W2PPV9 198 aa1.32□□□□□ -2.2
CCDC93-205ENST00000466171 CTAGE15A4D2H0 777 aa1.32□□□□□ -2.2
CCDC93-205ENST00000466171 ZNF716A6NP11 495 aa1.32□□□□□ -2.2
CCDC93-205ENST00000466171 RNF13O43567 381 aa1.32□□□□□ -2.2
CCDC93-205ENST00000466171 ERLIN1O75477 346 aa1.32□□□□□ -2.2
CCDC93-205ENST00000466171 WBP4O75554 376 aaKnown RBP1.32□□□□□ -2.2
CCDC93-205ENST00000466171 UPK3AO75631 287 aa1.32□□□□□ -2.2
CCDC93-205ENST00000466171 CLIC3O95833 236 aa1.32□□□□□ -2.2
CCDC93-205ENST00000466171 SLC25A27O95847 323 aa1.32□□□□□ -2.2
CCDC93-205ENST00000466171 NDUFB10O96000 172 aa1.32□□□□□ -2.2
CCDC93-205ENST00000466171 CST1P01037 141 aa1.32□□□□□ -2.2
CCDC93-205ENST00000466171 IGHV2-5P01817 119 aa1.32□□□□□ -2.2
CCDC93-205ENST00000466171 C2P06681 752 aa1.32□□□□□ -2.2
CCDC93-205ENST00000466171 CSF3P09919 207 aa1.32□□□□□ -2.2
CCDC93-205ENST00000466171 CT62P0C5K7 136 aa1.32□□□□□ -2.2
CCDC93-205ENST00000466171 ZNF735P0CB33 412 aa1.32□□□□□ -2.2
CCDC93-205ENST00000466171 GKN3PP0CG01 181 aa1.32□□□□□ -2.2
CCDC93-205ENST00000466171 ZNF24P17028 368 aa1.32□□□□□ -2.2
CCDC93-205ENST00000466171 RCC1P18754 421 aaPredicted RBP1.32□□□□□ -2.2
CCDC93-205ENST00000466171 CMA1P23946 247 aa1.32□□□□□ -2.2
CCDC93-205ENST00000466171 CRYBB2P43320 205 aa1.32□□□□□ -2.2
CCDC93-205ENST00000466171 CDKN1BP46527 198 aa1.32□□□□□ -2.2
CCDC93-205ENST00000466171 CSNK1DP48730 415 aa1.32□□□□□ -2.2
CCDC93-205ENST00000466171 RORCP51449 518 aa1.32□□□□□ -2.2
CCDC93-205ENST00000466171 CCR6P51684 374 aa1.32□□□□□ -2.2
CCDC93-205ENST00000466171 SUB1P53999 127 aaKnown RBP eCLIP1.32□□□□□ -2.2
CCDC93-205ENST00000466171 IRX3P78415 501 aaPredicted RBP1.32□□□□□ -2.2
CCDC93-205ENST00000466171 LRRC74AQ0VAA2 488 aa1.32□□□□□ -2.2
CCDC93-205ENST00000466171 ECH1Q13011 328 aa1.32□□□□□ -2.2
CCDC93-205ENST00000466171 AQP6Q13520 282 aa1.32□□□□□ -2.2
CCDC93-205ENST00000466171 EBI3Q14213 229 aa1.32□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms