RNA–Protein interactions for RNA: ENST00000460064.1

CCDC50-203, Transcript of coiled-coil domain containing 50, humanhuman

TSL 2

Gene CCDC50, Length 420 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-203ENST00000460064 THOC6Q86W42 341 aaKnown RBP3.77□□□□□ -1.81
CCDC50-203ENST00000460064 CEP112Q8N8E3 955 aa3.77□□□□□ -1.81
CCDC50-203ENST00000460064 OR52K1Q8NGK4 314 aa3.77□□□□□ -1.81
CCDC50-203ENST00000460064 NDRG1Q92597 394 aaKnown RBP3.77□□□□□ -1.81
CCDC50-203ENST00000460064 FGF14Q92915 247 aa3.77□□□□□ -1.81
CCDC50-203ENST00000460064 MBOAT4Q96T53 435 aa3.77□□□□□ -1.81
CCDC50-203ENST00000460064 RANBP3Q9H6Z4 567 aaPredicted RBP3.77□□□□□ -1.81
CCDC50-203ENST00000460064 PSMC3IPQ9P2W1 217 aaPredicted RBP3.77□□□□□ -1.81
CCDC50-203ENST00000460064 CLCF1Q9UBD9 225 aa3.77□□□□□ -1.81
CCDC50-203ENST00000460064 CSDC2Q9Y534 153 aaKnown RBP3.77□□□□□ -1.81
CCDC50-203ENST00000460064 V9GYY5 206 aaPredicted RBP3.77□□□□□ -1.81
CCDC50-203ENST00000460064 LRRIQ4A6NIV6 560 aa3.76□□□□□ -1.81
CCDC50-203ENST00000460064 L7N2F9 121 aa3.76□□□□□ -1.81
CCDC50-203ENST00000460064 CCL21O00585 134 aa3.76□□□□□ -1.81
CCDC50-203ENST00000460064 C2P06681 752 aa3.76□□□□□ -1.81
CCDC50-203ENST00000460064 TCN1P20061 433 aaPredicted RBP3.76□□□□□ -1.81
CCDC50-203ENST00000460064 FBXW4P57775 412 aa3.76□□□□□ -1.81
CCDC50-203ENST00000460064 KRTAP10-5P60370 271 aa3.76□□□□□ -1.81
CCDC50-203ENST00000460064 ACVR1Q04771 509 aa3.76□□□□□ -1.81
CCDC50-203ENST00000460064 DAZ2Q13117 558 aaKnown RBP3.76□□□□□ -1.81
CCDC50-203ENST00000460064 CNIH2Q6PI25 160 aa3.76□□□□□ -1.81
CCDC50-203ENST00000460064 C6orf89Q6UWU4 347 aa3.76□□□□□ -1.81
CCDC50-203ENST00000460064 TMEM61Q8N0U2 210 aa3.76□□□□□ -1.81
CCDC50-203ENST00000460064 CENPKQ9BS16 269 aa3.76□□□□□ -1.81
CCDC50-203ENST00000460064 NUP58Q9BVL2 599 aa3.76□□□□□ -1.81
CCDC50-203ENST00000460064 CLSTN2Q9H4D0 955 aa3.76□□□□□ -1.81
CCDC50-203ENST00000460064 NXF3Q9H4D5 531 aaKnown RBP3.76□□□□□ -1.81
CCDC50-203ENST00000460064 ASB8Q9H765 288 aa3.76□□□□□ -1.81
CCDC50-203ENST00000460064 DAZ3Q9NR90 486 aaKnown RBP3.76□□□□□ -1.81
CCDC50-203ENST00000460064 EXD2Q9NVH0 621 aa3.76□□□□□ -1.81
CCDC50-203ENST00000460064 RPS6KB2Q9UBS0 482 aa3.76□□□□□ -1.81
CCDC50-203ENST00000460064 NUP50Q9UKX7 468 aa3.76□□□□□ -1.81
CCDC50-203ENST00000460064 MSH6P52701 1360 aa3.76□□□□□ -1.81
CCDC50-203ENST00000460064 MROH5Q6ZUA9 1318 aa3.75□□□□□ -1.81
CCDC50-203ENST00000460064 A0A0G2JN53 185 aa3.75□□□□□ -1.81
CCDC50-203ENST00000460064 GOLGA6L7A0A1B0GV03 622 aa3.75□□□□□ -1.81
CCDC50-203ENST00000460064 KRTAP4-16G5E9R7 235 aaPredicted RBP3.75□□□□□ -1.81
CCDC50-203ENST00000460064 ALDOBP05062 364 aa3.75□□□□□ -1.81
CCDC50-203ENST00000460064 RORAP35398 523 aa3.75□□□□□ -1.81
CCDC50-203ENST00000460064 NUDT1P36639 197 aa3.75□□□□□ -1.81
CCDC50-203ENST00000460064 ARHGAP19Q14CB8 494 aa3.75□□□□□ -1.81
CCDC50-203ENST00000460064 CCDC122Q5T0U0 273 aa3.75□□□□□ -1.81
CCDC50-203ENST00000460064 LCE1EQ5T753 118 aa3.75□□□□□ -1.81
CCDC50-203ENST00000460064 ARMC12Q5T9G4 340 aa3.75□□□□□ -1.81
CCDC50-203ENST00000460064 AADACL4Q5VUY2 407 aa3.75□□□□□ -1.81
CCDC50-203ENST00000460064 CTRB2Q6GPI1 263 aa3.75□□□□□ -1.81
CCDC50-203ENST00000460064 CLEC2AQ6UVW9 174 aa3.75□□□□□ -1.81
CCDC50-203ENST00000460064 SPATA4Q8NEY3 305 aa3.75□□□□□ -1.81
CCDC50-203ENST00000460064 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP3.75□□□□□ -1.81
CCDC50-203ENST00000460064 MYDGFQ969H8 173 aa3.75□□□□□ -1.81
CCDC50-203ENST00000460064 ELSPBP1Q96BH3 223 aa3.75□□□□□ -1.81
CCDC50-203ENST00000460064 MED8Q96G25 268 aa3.75□□□□□ -1.81
CCDC50-203ENST00000460064 SLC35E1Q96K37 410 aa3.75□□□□□ -1.81
CCDC50-203ENST00000460064 SH3GL1Q99961 368 aa3.75□□□□□ -1.81
CCDC50-203ENST00000460064 RARRES2Q99969 163 aa3.75□□□□□ -1.81
CCDC50-203ENST00000460064 BCL7BQ9BQE9 202 aa3.75□□□□□ -1.81
CCDC50-203ENST00000460064 SRMSQ9H3Y6 488 aa3.75□□□□□ -1.81
CCDC50-203ENST00000460064 CLMPQ9H6B4 373 aa3.75□□□□□ -1.81
CCDC50-203ENST00000460064 MMP26Q9NRE1 261 aa3.75□□□□□ -1.81
CCDC50-203ENST00000460064 STARD10Q9Y365 291 aa3.75□□□□□ -1.81
CCDC50-203ENST00000460064 H0YIV9 168 aa3.74□□□□□ -1.81
CCDC50-203ENST00000460064 DYNC1I1O14576 645 aa3.74□□□□□ -1.81
CCDC50-203ENST00000460064 GOSR2O14653 212 aa3.74□□□□□ -1.81
CCDC50-203ENST00000460064 PPP1R2P9O14990 202 aa3.74□□□□□ -1.81
CCDC50-203ENST00000460064 RNF13O43567 381 aa3.74□□□□□ -1.81
CCDC50-203ENST00000460064 FGFR1OPO95684 399 aaKnown RBP3.74□□□□□ -1.81
CCDC50-203ENST00000460064 INSP01308 110 aa3.74□□□□□ -1.81
CCDC50-203ENST00000460064 CRYGBP07316 175 aa3.74□□□□□ -1.81
CCDC50-203ENST00000460064 CT62P0C5K7 136 aa3.74□□□□□ -1.81
CCDC50-203ENST00000460064 POLR2MP0CAP2 368 aa3.74□□□□□ -1.81
CCDC50-203ENST00000460064 OR1G1P47890 313 aa3.74□□□□□ -1.81
CCDC50-203ENST00000460064 NPBWR2P48146 333 aa3.74□□□□□ -1.81
CCDC50-203ENST00000460064 TRDNQ13061 729 aa3.74□□□□□ -1.81
CCDC50-203ENST00000460064 UNC119Q13432 240 aa3.74□□□□□ -1.81
CCDC50-203ENST00000460064 KIAA0087Q14695 138 aa3.74□□□□□ -1.81
CCDC50-203ENST00000460064 RCN1Q15293 331 aa3.74□□□□□ -1.81
CCDC50-203ENST00000460064 STK11Q15831 433 aa3.74□□□□□ -1.81
CCDC50-203ENST00000460064 VPS26BQ4G0F5 336 aa3.74□□□□□ -1.81
CCDC50-203ENST00000460064 LCN12Q6JVE5 192 aa3.74□□□□□ -1.81
CCDC50-203ENST00000460064 SLC25A48Q6ZT89 311 aaKnown RBP3.74□□□□□ -1.81
CCDC50-203ENST00000460064 MYOCDQ8IZQ8 938 aa3.74□□□□□ -1.81
CCDC50-203ENST00000460064 TTC5Q8N0Z6 440 aa3.74□□□□□ -1.81
CCDC50-203ENST00000460064 PUSL1Q8N0Z8 303 aaKnown RBP3.74□□□□□ -1.81
CCDC50-203ENST00000460064 BBS5Q8N3I7 341 aa3.74□□□□□ -1.81
CCDC50-203ENST00000460064 VN1R2Q8NFZ6 395 aa3.74□□□□□ -1.81
CCDC50-203ENST00000460064 OR1N2Q8NGR9 330 aa3.74□□□□□ -1.81
CCDC50-203ENST00000460064 PLPPR1Q8TBJ4 325 aa3.74□□□□□ -1.81
CCDC50-203ENST00000460064 RAB3IL1Q8TBN0 382 aa3.74□□□□□ -1.81
CCDC50-203ENST00000460064 ACER1Q8TDN7 264 aa3.74□□□□□ -1.81
CCDC50-203ENST00000460064 C17orf50Q8WW18 174 aa3.74□□□□□ -1.81
CCDC50-203ENST00000460064 RDH5Q92781 318 aa3.74□□□□□ -1.81
CCDC50-203ENST00000460064 NRTNQ99748 197 aa3.74□□□□□ -1.81
CCDC50-203ENST00000460064 FAM192AQ9GZU8 254 aa3.74□□□□□ -1.81
CCDC50-203ENST00000460064 ZNF318Q5VUA4 2279 aa3.74□□□□□ -1.81
CCDC50-203ENST00000460064 BRD4O60885 1362 aaPredicted RBP3.74□□□□□ -1.81
CCDC50-203ENST00000460064 PDS5BQ9NTI5 1447 aa3.73□□□□□ -1.81
CCDC50-203ENST00000460064 H0Y9J4 135 aa3.73□□□□□ -1.81
CCDC50-203ENST00000460064 TRAF3IP2O43734 574 aaPredicted RBP3.73□□□□□ -1.81
CCDC50-203ENST00000460064 SOX15O60248 233 aa3.73□□□□□ -1.81
CCDC50-203ENST00000460064 MOSP00540 346 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms