RNA–Protein interactions for RNA: ENST00000452162.5

PKP4-206, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 2,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-206ENST00000452162 SMG1Q96Q15 3661 aaKnown RBP9.69□□□□□ -0.86
PKP4-206ENST00000452162 MPDZO75970 2070 aa9.68□□□□□ -0.86
PKP4-206ENST00000452162 IGHV3-20A0A0C4DH32 117 aa9.68□□□□□ -0.86
PKP4-206ENST00000452162 FABP12A6NFH5 140 aa9.68□□□□□ -0.86
PKP4-206ENST00000452162 OGG1O15527 345 aa9.68□□□□□ -0.86
PKP4-206ENST00000452162 SSX4O60224 188 aa9.68□□□□□ -0.86
PKP4-206ENST00000452162 CDC40O60508 579 aaKnown RBP eCLIP9.68□□□□□ -0.865e-9■□□□□ 8.6
PKP4-206ENST00000452162 SELENOFO60613 162 aa9.68□□□□□ -0.86
PKP4-206ENST00000452162 IL7P13232 177 aa9.68□□□□□ -0.86
PKP4-206ENST00000452162 CFL1P23528 166 aaKnown RBP9.68□□□□□ -0.86
PKP4-206ENST00000452162 OTX2P32243 289 aa9.68□□□□□ -0.86
PKP4-206ENST00000452162 PYCR1P32322 319 aa9.68□□□□□ -0.86
PKP4-206ENST00000452162 NRG3P56975 720 aa9.68□□□□□ -0.86
PKP4-206ENST00000452162 ACTA2P62736 377 aa9.68□□□□□ -0.86
PKP4-206ENST00000452162 ACTG2P63267 376 aa9.68□□□□□ -0.86
PKP4-206ENST00000452162 RNF4P78317 190 aa9.68□□□□□ -0.86
PKP4-206ENST00000452162 RPL18Q07020 188 aaKnown RBP9.68□□□□□ -0.86
PKP4-206ENST00000452162 SLC3A1Q07837 685 aa9.68□□□□□ -0.86
PKP4-206ENST00000452162 TP53I3Q53FA7 332 aa9.68□□□□□ -0.86
PKP4-206ENST00000452162 ALG10Q5BKT4 473 aa9.68□□□□□ -0.86
PKP4-206ENST00000452162 LEG1Q6P5S2 330 aa9.68□□□□□ -0.86
PKP4-206ENST00000452162 PXKQ7Z7A4 578 aa9.68□□□□□ -0.86
PKP4-206ENST00000452162 GHDCQ8N2G8 530 aa9.68□□□□□ -0.86
PKP4-206ENST00000452162 LSM14AQ8ND56 463 aaKnown RBP9.68□□□□□ -0.86
PKP4-206ENST00000452162 NFAM1Q8NET5 270 aaPredicted RBP9.68□□□□□ -0.86
PKP4-206ENST00000452162 ABHD4Q8TB40 342 aa9.68□□□□□ -0.86
PKP4-206ENST00000452162 TBL1XR1Q9BZK7 514 aa9.68□□□□□ -0.86
PKP4-206ENST00000452162 FKRPQ9H9S5 495 aa9.68□□□□□ -0.86
PKP4-206ENST00000452162 TIGARQ9NQ88 270 aa9.68□□□□□ -0.86
PKP4-206ENST00000452162 COMMD3Q9UBI1 195 aa9.68□□□□□ -0.86
PKP4-206ENST00000452162 CNTRLQ7Z7A1 2325 aa9.68□□□□□ -0.86
PKP4-206ENST00000452162 BSNQ9UPA5 3926 aa9.68□□□□□ -0.86
PKP4-206ENST00000452162 OR6C70A6NIJ9 312 aa9.68□□□□□ -0.86
PKP4-206ENST00000452162 GLCEO94923 617 aa9.68□□□□□ -0.86
PKP4-206ENST00000452162 WISP1O95388 367 aa9.68□□□□□ -0.86
PKP4-206ENST00000452162 BGLAPP02818 100 aa9.68□□□□□ -0.86
PKP4-206ENST00000452162 CD63P08962 238 aa9.68□□□□□ -0.86
PKP4-206ENST00000452162 SDHAP31040 664 aa9.68□□□□□ -0.86
PKP4-206ENST00000452162 EVI2BP34910 448 aa9.68□□□□□ -0.86
PKP4-206ENST00000452162 CTXN1P60606 82 aa9.68□□□□□ -0.86
PKP4-206ENST00000452162 CD300CQ08708 224 aa9.68□□□□□ -0.86
PKP4-206ENST00000452162 DEFB109BQ30KR1 87 aa9.68□□□□□ -0.86
PKP4-206ENST00000452162 CCBE1Q6UXH8 406 aaPredicted RBP9.68□□□□□ -0.86
PKP4-206ENST00000452162 GDPD1Q8N9F7 314 aa9.68□□□□□ -0.86
PKP4-206ENST00000452162 APCDD1LQ8NCL9 501 aa9.68□□□□□ -0.86
PKP4-206ENST00000452162 TP53INP1Q96A56 240 aa9.68□□□□□ -0.86
PKP4-206ENST00000452162 PELI1Q96FA3 418 aa9.68□□□□□ -0.86
PKP4-206ENST00000452162 TTTY10Q9BZA0 68 aa9.68□□□□□ -0.86
PKP4-206ENST00000452162 COPS3Q9UNS2 423 aa9.68□□□□□ -0.86
PKP4-206ENST00000452162 PCDHGB7Q9Y5F8 929 aa9.68□□□□□ -0.86
PKP4-206ENST00000452162 FAM208BQ5VWN6 2430 aa9.68□□□□□ -0.86
PKP4-206ENST00000452162 A0A1W2PQ09 198 aa9.67□□□□□ -0.86
PKP4-206ENST00000452162 IDSB3KWA1 339 aa9.67□□□□□ -0.86
PKP4-206ENST00000452162 MAGEB4O15481 346 aaPredicted RBP9.67□□□□□ -0.86
PKP4-206ENST00000452162 SEC14L5O43304 696 aa9.67□□□□□ -0.86
PKP4-206ENST00000452162 SCO2O43819 266 aa9.67□□□□□ -0.86
PKP4-206ENST00000452162 GMFGO60234 142 aa9.67□□□□□ -0.86
PKP4-206ENST00000452162 HPGDSO60760 199 aa9.67□□□□□ -0.86
PKP4-206ENST00000452162 APOA1P02647 267 aa9.67□□□□□ -0.86
PKP4-206ENST00000452162 PGCP20142 388 aa9.67□□□□□ -0.86
PKP4-206ENST00000452162 SHC1P29353 583 aa9.67□□□□□ -0.86
PKP4-206ENST00000452162 ACVR1BP36896 505 aa9.67□□□□□ -0.86
PKP4-206ENST00000452162 CBFBQ13951 182 aa9.67□□□□□ -0.86
PKP4-206ENST00000452162 SSPNQ14714 243 aa9.67□□□□□ -0.86
PKP4-206ENST00000452162 CDK5R1Q15078 307 aa9.67□□□□□ -0.86
PKP4-206ENST00000452162 FAM27D1Q5T7N8 215 aa9.67□□□□□ -0.86
PKP4-206ENST00000452162 LYPD4Q6UWN0 246 aa9.67□□□□□ -0.86
PKP4-206ENST00000452162 NANOGNBQ7Z5D8 188 aa9.67□□□□□ -0.86
PKP4-206ENST00000452162 JAZF1Q86VZ6 243 aa9.67□□□□□ -0.86
PKP4-206ENST00000452162 GHSRQ92847 366 aa9.67□□□□□ -0.86
PKP4-206ENST00000452162 EXTL1Q92935 676 aa9.67□□□□□ -0.86
PKP4-206ENST00000452162 TSPAN32Q96QS1 320 aa9.67□□□□□ -0.86
PKP4-206ENST00000452162 CRB3Q9BUF7 120 aa9.67□□□□□ -0.86
PKP4-206ENST00000452162 ALG12Q9BV10 488 aa9.67□□□□□ -0.86
PKP4-206ENST00000452162 NXT1Q9UKK6 140 aaKnown RBP9.67□□□□□ -0.86
PKP4-206ENST00000452162 PPIEQ9UNP9 301 aaKnown RBP9.67□□□□□ -0.86
PKP4-206ENST00000452162 TRAV36DV7A0A075B6V5 113 aa9.67□□□□□ -0.86
PKP4-206ENST00000452162 F13BP05160 661 aa9.67□□□□□ -0.86
PKP4-206ENST00000452162 HEXBP07686 556 aa9.67□□□□□ -0.86
PKP4-206ENST00000452162 CSF3P09919 207 aa9.67□□□□□ -0.86
PKP4-206ENST00000452162 GP1BBP13224 206 aa9.67□□□□□ -0.86
PKP4-206ENST00000452162 CXCR1P25024 350 aa9.67□□□□□ -0.86
PKP4-206ENST00000452162 RPS5P46782 204 aaKnown RBP9.67□□□□□ -0.86
PKP4-206ENST00000452162 RFX2P48378 723 aa9.67□□□□□ -0.86
PKP4-206ENST00000452162 P2RX1P51575 399 aa9.67□□□□□ -0.86
PKP4-206ENST00000452162 HSF2Q03933 536 aa9.67□□□□□ -0.86
PKP4-206ENST00000452162 EMC4Q5J8M3 183 aa9.67□□□□□ -0.86
PKP4-206ENST00000452162 MZT2AQ6P582 158 aa9.67□□□□□ -0.86
PKP4-206ENST00000452162 CNIH2Q6PI25 160 aa9.67□□□□□ -0.86
PKP4-206ENST00000452162 PPP1R32Q7Z5V6 425 aa9.67□□□□□ -0.86
PKP4-206ENST00000452162 CEACAM19Q7Z692 300 aa9.67□□□□□ -0.86
PKP4-206ENST00000452162 MS4A15Q8N5U1 240 aa9.67□□□□□ -0.86
PKP4-206ENST00000452162 TEX19Q8NA77 164 aa9.67□□□□□ -0.86
PKP4-206ENST00000452162 OR6K6Q8NGW6 343 aa9.67□□□□□ -0.86
PKP4-206ENST00000452162 GPR119Q8TDV5 335 aa9.67□□□□□ -0.86
PKP4-206ENST00000452162 ACOT12Q8WYK0 555 aa9.67□□□□□ -0.86
PKP4-206ENST00000452162 ITPKCQ96DU7 683 aa9.67□□□□□ -0.86
PKP4-206ENST00000452162 SMIM19Q96E16 107 aa9.67□□□□□ -0.86
PKP4-206ENST00000452162 PTDSS2Q9BVG9 487 aa9.67□□□□□ -0.86
PKP4-206ENST00000452162 PPP1R3EQ9H7J1 279 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms