RNA–Protein interactions for RNA: ENST00000443563.5

HDAC6-211, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-211ENST00000443563 WNT11O96014 354 aa9.53□□□□□ -0.88
HDAC6-211ENST00000443563 IGHG1P01857 330 aa9.53□□□□□ -0.88
HDAC6-211ENST00000443563 THBDP07204 575 aa9.53□□□□□ -0.88
HDAC6-211ENST00000443563 ITGA5P08648 1049 aa9.53□□□□□ -0.88
HDAC6-211ENST00000443563 HOXB1P14653 301 aaPredicted RBP9.53□□□□□ -0.88
HDAC6-211ENST00000443563 AQP2P41181 271 aa9.53□□□□□ -0.88
HDAC6-211ENST00000443563 CSNK1A1P48729 337 aa9.53□□□□□ -0.88
HDAC6-211ENST00000443563 HMGA2P52926 109 aa9.53□□□□□ -0.88
HDAC6-211ENST00000443563 RPS4XP62701 263 aaKnown RBP9.53□□□□□ -0.88
HDAC6-211ENST00000443563 ROR2Q01974 943 aaKnown RBP9.53□□□□□ -0.88
HDAC6-211ENST00000443563 CAMK2DQ13557 499 aa9.53□□□□□ -0.88
HDAC6-211ENST00000443563 PPA1Q15181 289 aa9.53□□□□□ -0.88
HDAC6-211ENST00000443563 TSC22D1Q15714 1073 aa9.53□□□□□ -0.88
HDAC6-211ENST00000443563 TAB1Q15750 504 aa9.53□□□□□ -0.88
HDAC6-211ENST00000443563 ZBED5Q49AG3 693 aa9.53□□□□□ -0.88
HDAC6-211ENST00000443563 CARD17Q5XLA6 110 aa9.53□□□□□ -0.88
HDAC6-211ENST00000443563 FAM205BPQ63HN1 556 aa9.53□□□□□ -0.88
HDAC6-211ENST00000443563 ANKRD16Q6P6B7 361 aa9.53□□□□□ -0.88
HDAC6-211ENST00000443563 NHLRC1Q6VVB1 395 aa9.53□□□□□ -0.88
HDAC6-211ENST00000443563 SPATA24Q86W54 205 aa9.53□□□□□ -0.88
HDAC6-211ENST00000443563 WFDC8Q8IUA0 241 aa9.53□□□□□ -0.88
HDAC6-211ENST00000443563 OR4K5Q8NGD3 323 aa9.53□□□□□ -0.88
HDAC6-211ENST00000443563 MAGEE2Q8TD90 523 aaPredicted RBP9.53□□□□□ -0.88
HDAC6-211ENST00000443563 SLC25A44Q96H78 314 aaPredicted RBP9.53□□□□□ -0.88
HDAC6-211ENST00000443563 FAM46AQ96IP4 442 aaKnown RBP9.53□□□□□ -0.88
HDAC6-211ENST00000443563 TXNDC15Q96J42 360 aa9.53□□□□□ -0.88
HDAC6-211ENST00000443563 ALKBH3Q96Q83 286 aaPredicted RBP9.53□□□□□ -0.88
HDAC6-211ENST00000443563 ULBP2Q9BZM5 246 aa9.53□□□□□ -0.88
HDAC6-211ENST00000443563 LRMDAQ9H2I8 198 aa9.53□□□□□ -0.88
HDAC6-211ENST00000443563 CLEC4MQ9H2X3 399 aaPredicted RBP9.53□□□□□ -0.88
HDAC6-211ENST00000443563 TXNIPQ9H3M7 391 aa9.53□□□□□ -0.88
HDAC6-211ENST00000443563 ESRP2Q9H6T0 727 aaKnown RBP9.53□□□□□ -0.88
HDAC6-211ENST00000443563 GPR35Q9HC97 309 aa9.53□□□□□ -0.88
HDAC6-211ENST00000443563 OBP2BQ9NPH6 170 aa9.53□□□□□ -0.88
HDAC6-211ENST00000443563 PDZD2O15018 2839 aa9.52□□□□□ -0.88
HDAC6-211ENST00000443563 TRBV4-1A0A0J9YWV2 114 aa9.52□□□□□ -0.89
HDAC6-211ENST00000443563 M0R3G1 203 aa9.52□□□□□ -0.89
HDAC6-211ENST00000443563 TNFRSF11BO00300 401 aa9.52□□□□□ -0.89
HDAC6-211ENST00000443563 OR10H3O60404 316 aa9.52□□□□□ -0.89
HDAC6-211ENST00000443563 IGHMP01871 453 aa9.52□□□□□ -0.89
HDAC6-211ENST00000443563 HRGP04196 525 aa9.52□□□□□ -0.89
HDAC6-211ENST00000443563 F13BP05160 661 aa9.52□□□□□ -0.89
HDAC6-211ENST00000443563 FUT4P22083 530 aa9.52□□□□□ -0.89
HDAC6-211ENST00000443563 GPR4P46093 362 aa9.52□□□□□ -0.89
HDAC6-211ENST00000443563 OMPP47874 163 aa9.52□□□□□ -0.89
HDAC6-211ENST00000443563 CLRN1P58418 232 aa9.52□□□□□ -0.89
HDAC6-211ENST00000443563 CBX1P83916 185 aa9.52□□□□□ -0.89
HDAC6-211ENST00000443563 LAPTM4AQ15012 233 aa9.52□□□□□ -0.89
HDAC6-211ENST00000443563 C9orf135Q5VTT2 229 aa9.52□□□□□ -0.89
HDAC6-211ENST00000443563 OR2T5Q6IEZ7 315 aa9.52□□□□□ -0.89
HDAC6-211ENST00000443563 KLHL17Q6TDP4 642 aa9.52□□□□□ -0.89
HDAC6-211ENST00000443563 CCDC36Q8IYA8 594 aa9.52□□□□□ -0.89
HDAC6-211ENST00000443563 OR1K1Q8NGR3 316 aa9.52□□□□□ -0.89
HDAC6-211ENST00000443563 OR2T29Q8NH02 315 aa9.52□□□□□ -0.89
HDAC6-211ENST00000443563 OR51A7Q8NH64 312 aa9.52□□□□□ -0.89
HDAC6-211ENST00000443563 MOSPD2Q8NHP6 518 aa9.52□□□□□ -0.89
HDAC6-211ENST00000443563 FNDC8Q8TC99 324 aa9.52□□□□□ -0.89
HDAC6-211ENST00000443563 GNPDA2Q8TDQ7 276 aa9.52□□□□□ -0.89
HDAC6-211ENST00000443563 PIK3IP1Q96FE7 263 aa9.52□□□□□ -0.89
HDAC6-211ENST00000443563 LURAP1Q96LR2 239 aa9.52□□□□□ -0.89
HDAC6-211ENST00000443563 TNFRSF13CQ96RJ3 184 aa9.52□□□□□ -0.89
HDAC6-211ENST00000443563 FUZQ9BT04 418 aa9.52□□□□□ -0.89
HDAC6-211ENST00000443563 REEP1Q9H902 201 aa9.52□□□□□ -0.89
HDAC6-211ENST00000443563 CRLF2Q9HC73 371 aa9.52□□□□□ -0.89
HDAC6-211ENST00000443563 SLC17A5Q9NRA2 495 aa9.52□□□□□ -0.89
HDAC6-211ENST00000443563 GLTPQ9NZD2 209 aa9.52□□□□□ -0.89
HDAC6-211ENST00000443563 SLC7A8Q9UHI5 535 aa9.52□□□□□ -0.89
HDAC6-211ENST00000443563 POFUT2Q9Y2G5 429 aa9.52□□□□□ -0.89
HDAC6-211ENST00000443563 ABCA12Q86UK0 2595 aa9.52□□□□□ -0.89
HDAC6-211ENST00000443563 ANKRD17O75179 2603 aaKnown RBP9.51□□□□□ -0.89
HDAC6-211ENST00000443563 TRAV27A0A087WT01 109 aa9.51□□□□□ -0.89
HDAC6-211ENST00000443563 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.51□□□□□ -0.89
HDAC6-211ENST00000443563 UNC119BA6NIH7 251 aa9.51□□□□□ -0.89
HDAC6-211ENST00000443563 A6NIZ1 184 aa9.51□□□□□ -0.89
HDAC6-211ENST00000443563 DEFB108AA8MXU0 73 aa9.51□□□□□ -0.89
HDAC6-211ENST00000443563 ZNF99A8MXY4 864 aaPredicted RBP9.51□□□□□ -0.89
HDAC6-211ENST00000443563 GNGT2O14610 69 aa9.51□□□□□ -0.89
HDAC6-211ENST00000443563 CDC42EP2O14613 210 aa9.51□□□□□ -0.89
HDAC6-211ENST00000443563 KLF4O43474 513 aa9.51□□□□□ -0.89
HDAC6-211ENST00000443563 CIB2O75838 187 aa9.51□□□□□ -0.89
HDAC6-211ENST00000443563 NDUFB2O95178 105 aa9.51□□□□□ -0.89
HDAC6-211ENST00000443563 CST1P01037 141 aa9.51□□□□□ -0.89
HDAC6-211ENST00000443563 PGA4P0DJD7 388 aa9.51□□□□□ -0.89
HDAC6-211ENST00000443563 PGA3P0DJD8 388 aa9.51□□□□□ -0.89
HDAC6-211ENST00000443563 ACADSP16219 412 aa9.51□□□□□ -0.89
HDAC6-211ENST00000443563 CDH2P19022 906 aaPredicted RBP9.51□□□□□ -0.89
HDAC6-211ENST00000443563 RPL4P36578 427 aaKnown RBP9.51□□□□□ -0.89
HDAC6-211ENST00000443563 LIMS1P48059 325 aa9.51□□□□□ -0.89
HDAC6-211ENST00000443563 FOXG1P55316 489 aaPredicted RBP9.51□□□□□ -0.89
HDAC6-211ENST00000443563 CTXN1P60606 82 aa9.51□□□□□ -0.89
HDAC6-211ENST00000443563 UBE2NP61088 152 aaKnown RBP9.51□□□□□ -0.89
HDAC6-211ENST00000443563 RAP1BP61224 184 aa9.51□□□□□ -0.89
HDAC6-211ENST00000443563 RPL27P61353 136 aaKnown RBP9.51□□□□□ -0.89
HDAC6-211ENST00000443563 RAP1AP62834 184 aa9.51□□□□□ -0.89
HDAC6-211ENST00000443563 LSM11P83369 360 aaKnown RBP eCLIP9.51□□□□□ -0.89
HDAC6-211ENST00000443563 LGALS3BPQ08380 585 aa9.51□□□□□ -0.89
HDAC6-211ENST00000443563 MELKQ14680 651 aa9.51□□□□□ -0.89
HDAC6-211ENST00000443563 SEC23BQ15437 767 aa9.51□□□□□ -0.89
HDAC6-211ENST00000443563 ACKR1Q16570 336 aa9.51□□□□□ -0.89
HDAC6-211ENST00000443563 CEACAM16Q2WEN9 425 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms