RNA–Protein interactions for RNA: ENST00000440514.1

CPSF4-205, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-205ENST00000440514 WDR31Q8NA23 367 aa15.82■□□□□ 0.12
CPSF4-205ENST00000440514 OR4K5Q8NGD3 323 aa15.82■□□□□ 0.12
CPSF4-205ENST00000440514 OR6N1Q8NGY5 312 aa15.82■□□□□ 0.12
CPSF4-205ENST00000440514 OR51A7Q8NH64 312 aa15.82■□□□□ 0.12
CPSF4-205ENST00000440514 MUCL1Q96DR8 90 aa15.82■□□□□ 0.12
CPSF4-205ENST00000440514 FUZQ9BT04 418 aa15.82■□□□□ 0.12
CPSF4-205ENST00000440514 PLEKHF2Q9H8W4 249 aa15.82■□□□□ 0.12
CPSF4-205ENST00000440514 CRLF2Q9HC73 371 aa15.82■□□□□ 0.12
CPSF4-205ENST00000440514 IL1RAPQ9NPH3 570 aa15.82■□□□□ 0.12
CPSF4-205ENST00000440514 KRCC1Q9NPI7 259 aaPredicted RBP15.82■□□□□ 0.12
CPSF4-205ENST00000440514 SLC17A5Q9NRA2 495 aa15.82■□□□□ 0.12
CPSF4-205ENST00000440514 INIPQ9NRY2 104 aa15.82■□□□□ 0.12
CPSF4-205ENST00000440514 SLC25A15Q9Y619 301 aa15.82■□□□□ 0.12
CPSF4-205ENST00000440514 ABCA4P78363 2273 aa15.82■□□□□ 0.12
CPSF4-205ENST00000440514 CSMD2Q7Z408 3487 aa15.81■□□□□ 0.12
CPSF4-205ENST00000440514 A0A1W2PRG6 482 aa15.81■□□□□ 0.12
CPSF4-205ENST00000440514 MCIDASD6RGH6 385 aa15.81■□□□□ 0.12
CPSF4-205ENST00000440514 DNAJC8O75937 253 aaPredicted RBP15.81■□□□□ 0.12
CPSF4-205ENST00000440514 PLAUP00749 431 aa15.81■□□□□ 0.12
CPSF4-205ENST00000440514 HOXC12P31275 282 aa15.81■□□□□ 0.12
CPSF4-205ENST00000440514 CSNK1A1P48729 337 aa15.81■□□□□ 0.12
CPSF4-205ENST00000440514 ARF1P84077 181 aaKnown RBP15.81■□□□□ 0.12
CPSF4-205ENST00000440514 FHL1Q13642 323 aa15.81■□□□□ 0.12
CPSF4-205ENST00000440514 LAPTM4AQ15012 233 aa15.81■□□□□ 0.12
CPSF4-205ENST00000440514 TAF11Q15544 211 aa15.81■□□□□ 0.12
CPSF4-205ENST00000440514 ACKR1Q16570 336 aa15.81■□□□□ 0.12
CPSF4-205ENST00000440514 OAFQ86UD1 273 aa15.81■□□□□ 0.12
CPSF4-205ENST00000440514 C17orf78Q8N4C9 275 aa15.81■□□□□ 0.12
CPSF4-205ENST00000440514 OR6X1Q8NH79 312 aa15.81■□□□□ 0.12
CPSF4-205ENST00000440514 ADAD1Q96M93 576 aaKnown RBP15.81■□□□□ 0.12
CPSF4-205ENST00000440514 ZNF347Q96SE7 839 aa15.81■□□□□ 0.12
CPSF4-205ENST00000440514 ULBP2Q9BZM5 246 aa15.81■□□□□ 0.12
CPSF4-205ENST00000440514 NELFAQ9H3P2 528 aa15.81■□□□□ 0.12
CPSF4-205ENST00000440514 TMEM5Q9Y2B1 443 aa15.81■□□□□ 0.12
CPSF4-205ENST00000440514 PDZD2O15018 2839 aa15.8■□□□□ 0.12
CPSF4-205ENST00000440514 A0A096LPE4 126 aa15.8■□□□□ 0.12
CPSF4-205ENST00000440514 A0A1W2PPZ6 126 aa15.8■□□□□ 0.12
CPSF4-205ENST00000440514 SH3PXD2BA1X283 911 aa15.8■□□□□ 0.12
CPSF4-205ENST00000440514 RPL36A-HNRNPH2H7BZ11 118 aa15.8■□□□□ 0.12
CPSF4-205ENST00000440514 BCL10O95999 233 aa15.8■□□□□ 0.12
CPSF4-205ENST00000440514 MAGEA2P43356 314 aa15.8■□□□□ 0.12
CPSF4-205ENST00000440514 OMPP47874 163 aa15.8■□□□□ 0.12
CPSF4-205ENST00000440514 LIMS1P48059 325 aa15.8■□□□□ 0.12
CPSF4-205ENST00000440514 ZNF83P51522 516 aa15.8■□□□□ 0.12
CPSF4-205ENST00000440514 NR1H2P55055 460 aa15.8■□□□□ 0.12
CPSF4-205ENST00000440514 RUNX1T1Q06455 604 aa15.8■□□□□ 0.12
CPSF4-205ENST00000440514 BSPH1Q075Z2 132 aa15.8■□□□□ 0.12
CPSF4-205ENST00000440514 TOP3AQ13472 1001 aaPredicted RBP15.8■□□□□ 0.12
CPSF4-205ENST00000440514 TBRG1Q3YBR2 411 aa15.8■□□□□ 0.12
CPSF4-205ENST00000440514 ANKDD1AQ495B1 522 aa15.8■□□□□ 0.12
CPSF4-205ENST00000440514 ALG10Q5BKT4 473 aa15.8■□□□□ 0.12
CPSF4-205ENST00000440514 NCMAPQ5T1S8 102 aa15.8■□□□□ 0.12
CPSF4-205ENST00000440514 C1QTNF12Q5T7M4 302 aa15.8■□□□□ 0.12
CPSF4-205ENST00000440514 ZNF704Q6ZNC4 412 aaPredicted RBP15.8■□□□□ 0.12
CPSF4-205ENST00000440514 TMPRSS11FQ6ZWK6 438 aa15.8■□□□□ 0.12
CPSF4-205ENST00000440514 PIWIL3Q7Z3Z3 882 aaKnown RBP15.8■□□□□ 0.12
CPSF4-205ENST00000440514 ASB10Q8WXI3 467 aa15.8■□□□□ 0.12
CPSF4-205ENST00000440514 BCL2L2Q92843 193 aaPredicted RBP15.8■□□□□ 0.12
CPSF4-205ENST00000440514 TMEM54Q969K7 222 aa15.8■□□□□ 0.12
CPSF4-205ENST00000440514 LRR1Q96L50 414 aa15.8■□□□□ 0.12
CPSF4-205ENST00000440514 TNFRSF13CQ96RJ3 184 aa15.8■□□□□ 0.12
CPSF4-205ENST00000440514 C1QTNF6Q9BXI9 259 aa15.8■□□□□ 0.12
CPSF4-205ENST00000440514 CADM1Q9BY67 442 aaKnown RBP15.8■□□□□ 0.12
CPSF4-205ENST00000440514 MAGIXQ9H6Y5 334 aa15.8■□□□□ 0.12
CPSF4-205ENST00000440514 NGBQ9NPG2 151 aa15.8■□□□□ 0.12
CPSF4-205ENST00000440514 B3GAT2Q9NPZ5 323 aa15.8■□□□□ 0.12
CPSF4-205ENST00000440514 AMDHD2Q9Y303 409 aa15.8■□□□□ 0.12
CPSF4-205ENST00000440514 ANKRD17O75179 2603 aaKnown RBP15.8■□□□□ 0.12
CPSF4-205ENST00000440514 DPRXA6NFQ7 191 aa15.79■□□□□ 0.12
CPSF4-205ENST00000440514 EBAG9O00559 213 aa15.79■□□□□ 0.12
CPSF4-205ENST00000440514 PGA4P0DJD7 388 aa15.79■□□□□ 0.12
CPSF4-205ENST00000440514 PGA3P0DJD8 388 aa15.79■□□□□ 0.12
CPSF4-205ENST00000440514 SLC9A3P48764 834 aa15.79■□□□□ 0.12
CPSF4-205ENST00000440514 DAP3P51398 398 aaKnown RBP15.79■□□□□ 0.12
CPSF4-205ENST00000440514 SH3BGRP55822 239 aaPredicted RBP15.79■□□□□ 0.12
CPSF4-205ENST00000440514 TUBA1BP68363 451 aa15.79■□□□□ 0.12
CPSF4-205ENST00000440514 TUBA4AP68366 448 aa15.79■□□□□ 0.12
CPSF4-205ENST00000440514 KLHL24Q6TFL4 600 aa15.79■□□□□ 0.12
CPSF4-205ENST00000440514 PAMR1Q6UXH9 720 aa15.79■□□□□ 0.12
CPSF4-205ENST00000440514 TUBA1AQ71U36 451 aa15.79■□□□□ 0.12
CPSF4-205ENST00000440514 LRRC75AQ8NAA5 344 aa15.79■□□□□ 0.12
CPSF4-205ENST00000440514 NOXO1Q8NFA2 376 aa15.79■□□□□ 0.12
CPSF4-205ENST00000440514 ZNF566Q969W8 418 aa15.79■□□□□ 0.12
CPSF4-205ENST00000440514 SLC25A44Q96H78 314 aaPredicted RBP15.79■□□□□ 0.12
CPSF4-205ENST00000440514 ALPK1Q96QP1 1244 aa15.79■□□□□ 0.12
CPSF4-205ENST00000440514 NDEL1Q9GZM8 345 aa15.79■□□□□ 0.12
CPSF4-205ENST00000440514 ESRP2Q9H6T0 727 aaKnown RBP15.79■□□□□ 0.12
CPSF4-205ENST00000440514 UBTD1Q9HAC8 227 aa15.79■□□□□ 0.12
CPSF4-205ENST00000440514 PLEKHA6Q9Y2H5 1048 aa15.79■□□□□ 0.12
CPSF4-205ENST00000440514 TEX15Q9BXT5 2789 aa15.79■□□□□ 0.12
CPSF4-205ENST00000440514 RAI1Q7Z5J4 1906 aaPredicted RBP15.78■□□□□ 0.12
CPSF4-205ENST00000440514 ZNF99A8MXY4 864 aaPredicted RBP15.78■□□□□ 0.12
CPSF4-205ENST00000440514 GSC2O15499 205 aa15.78■□□□□ 0.12
CPSF4-205ENST00000440514 ZNF26P17031 533 aaPredicted RBP15.78■□□□□ 0.12
CPSF4-205ENST00000440514 CTXN1P60606 82 aa15.78■□□□□ 0.12
CPSF4-205ENST00000440514 CHRNB3Q05901 458 aa15.78■□□□□ 0.12
CPSF4-205ENST00000440514 FLOT2Q14254 428 aa15.78■□□□□ 0.12
CPSF4-205ENST00000440514 ZBED5Q49AG3 693 aa15.78■□□□□ 0.12
CPSF4-205ENST00000440514 FAM98BQ52LJ0 330 aaKnown RBP15.78■□□□□ 0.12
CPSF4-205ENST00000440514 ARMC4Q5T2S8 1044 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms