RNA–Protein interactions for RNA: ENST00000439475.1

MCF2L-216, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-216ENST00000439475 GLTPQ9NZD2 209 aa9.16□□□□□ -0.94
MCF2L-216ENST00000439475 EGFL7Q9UHF1 273 aa9.16□□□□□ -0.94
MCF2L-216ENST00000439475 ADGRG4Q8IZF6 3080 aa9.16□□□□□ -0.94
MCF2L-216ENST00000439475 RAI1Q7Z5J4 1906 aaPredicted RBP9.15□□□□□ -0.94
MCF2L-216ENST00000439475 CENPBD1B2RD01 187 aa9.15□□□□□ -0.94
MCF2L-216ENST00000439475 SHISA9B4DS77 424 aa9.15□□□□□ -0.94
MCF2L-216ENST00000439475 MGRN1O60291 552 aa9.15□□□□□ -0.94
MCF2L-216ENST00000439475 FARS2O95363 451 aaKnown RBP9.15□□□□□ -0.94
MCF2L-216ENST00000439475 DANCRP0C864 163 aa9.15□□□□□ -0.94
MCF2L-216ENST00000439475 SAGP10523 405 aaPredicted RBP9.15□□□□□ -0.94
MCF2L-216ENST00000439475 NR2C1P13056 603 aa9.15□□□□□ -0.94
MCF2L-216ENST00000439475 HSD17B1P14061 328 aa9.15□□□□□ -0.94
MCF2L-216ENST00000439475 FOSL1P15407 271 aa9.15□□□□□ -0.94
MCF2L-216ENST00000439475 PAX1P15863 534 aa9.15□□□□□ -0.94
MCF2L-216ENST00000439475 CBR1P16152 277 aa9.15□□□□□ -0.94
MCF2L-216ENST00000439475 NCK1P16333 377 aa9.15□□□□□ -0.94
MCF2L-216ENST00000439475 ITGA2P17301 1181 aa9.15□□□□□ -0.94
MCF2L-216ENST00000439475 TCN1P20061 433 aaPredicted RBP9.15□□□□□ -0.94
MCF2L-216ENST00000439475 CAPZA2P47755 286 aa9.15□□□□□ -0.94
MCF2L-216ENST00000439475 PTH2RP49190 550 aa9.15□□□□□ -0.94
MCF2L-216ENST00000439475 FABP6P51161 128 aa9.15□□□□□ -0.94
MCF2L-216ENST00000439475 DAP3P51398 398 aaKnown RBP9.15□□□□□ -0.94
MCF2L-216ENST00000439475 ATP5J2P56134 94 aa9.15□□□□□ -0.94
MCF2L-216ENST00000439475 LGALS3BPQ08380 585 aa9.15□□□□□ -0.94
MCF2L-216ENST00000439475 ZNF544Q6NX49 715 aa9.15□□□□□ -0.94
MCF2L-216ENST00000439475 ZNF730Q6ZMV8 503 aa9.15□□□□□ -0.94
MCF2L-216ENST00000439475 ZNF813Q6ZN06 617 aa9.15□□□□□ -0.94
MCF2L-216ENST00000439475 LINGO2Q7L985 606 aa9.15□□□□□ -0.94
MCF2L-216ENST00000439475 SLC46A3Q7Z3Q1 461 aa9.15□□□□□ -0.94
MCF2L-216ENST00000439475 YTHDF3Q7Z739 585 aaKnown RBP9.15□□□□□ -0.94
MCF2L-216ENST00000439475 LILRB1Q8NHL6 650 aaPredicted RBP9.15□□□□□ -0.94
MCF2L-216ENST00000439475 PFN4Q8NHR9 129 aa9.15□□□□□ -0.94
MCF2L-216ENST00000439475 ACOT11Q8WXI4 607 aaPredicted RBP9.15□□□□□ -0.94
MCF2L-216ENST00000439475 NEUROG1Q92886 237 aa9.15□□□□□ -0.94
MCF2L-216ENST00000439475 MCUR1Q96AQ8 359 aa9.15□□□□□ -0.94
MCF2L-216ENST00000439475 BPIFA2Q96DR5 249 aa9.15□□□□□ -0.94
MCF2L-216ENST00000439475 SLC25A44Q96H78 314 aaPredicted RBP9.15□□□□□ -0.94
MCF2L-216ENST00000439475 NSL1Q96IY1 281 aa9.15□□□□□ -0.94
MCF2L-216ENST00000439475 HSH2DQ96JZ2 352 aa9.15□□□□□ -0.94
MCF2L-216ENST00000439475 SLC38A2Q96QD8 506 aa9.15□□□□□ -0.94
MCF2L-216ENST00000439475 CDRT15Q96T59 188 aa9.15□□□□□ -0.94
MCF2L-216ENST00000439475 BDH2Q9BUT1 245 aa9.15□□□□□ -0.94
MCF2L-216ENST00000439475 TMUB1Q9BVT8 246 aa9.15□□□□□ -0.94
MCF2L-216ENST00000439475 GRIP2Q9C0E4 1043 aa9.15□□□□□ -0.94
MCF2L-216ENST00000439475 ANKRD19PQ9H560 264 aa9.15□□□□□ -0.94
MCF2L-216ENST00000439475 KRCC1Q9NPI7 259 aaPredicted RBP9.15□□□□□ -0.94
MCF2L-216ENST00000439475 DCAF13Q9NV06 445 aaKnown RBP9.15□□□□□ -0.94
MCF2L-216ENST00000439475 ZNF701Q9NV72 531 aaPredicted RBP9.15□□□□□ -0.94
MCF2L-216ENST00000439475 ARL8BQ9NVJ2 186 aa9.15□□□□□ -0.94
MCF2L-216ENST00000439475 GMPR2Q9P2T1 348 aaKnown RBP9.15□□□□□ -0.94
MCF2L-216ENST00000439475 MAGEL2Q9UJ55 1249 aa9.15□□□□□ -0.94
MCF2L-216ENST00000439475 ENPP4Q9Y6X5 453 aa9.15□□□□□ -0.94
MCF2L-216ENST00000439475 APCP25054 2843 aa9.15□□□□□ -0.94
MCF2L-216ENST00000439475 ANKRD17O75179 2603 aaKnown RBP9.15□□□□□ -0.95
MCF2L-216ENST00000439475 MED13LQ71F56 2210 aa9.15□□□□□ -0.95
MCF2L-216ENST00000439475 CENPEQ02224 2701 aa9.14□□□□□ -0.95
MCF2L-216ENST00000439475 B2RBV5 119 aa9.14□□□□□ -0.95
MCF2L-216ENST00000439475 E7EQL1 145 aa9.14□□□□□ -0.95
MCF2L-216ENST00000439475 IGHG1P01857 330 aa9.14□□□□□ -0.95
MCF2L-216ENST00000439475 F13BP05160 661 aa9.14□□□□□ -0.95
MCF2L-216ENST00000439475 RHCEP18577 417 aa9.14□□□□□ -0.95
MCF2L-216ENST00000439475 APOBEC3AP31941 199 aaPredicted RBP9.14□□□□□ -0.95
MCF2L-216ENST00000439475 TTKP33981 857 aa9.14□□□□□ -0.95
MCF2L-216ENST00000439475 AQP2P41181 271 aa9.14□□□□□ -0.95
MCF2L-216ENST00000439475 SLC9A3P48764 834 aa9.14□□□□□ -0.95
MCF2L-216ENST00000439475 ZNF84P51523 738 aa9.14□□□□□ -0.95
MCF2L-216ENST00000439475 CLRN1P58418 232 aa9.14□□□□□ -0.95
MCF2L-216ENST00000439475 SMIM11AP58511 58 aa9.14□□□□□ -0.95
MCF2L-216ENST00000439475 SLC25A3Q00325 362 aa9.14□□□□□ -0.95
MCF2L-216ENST00000439475 PRKCDQ05655 676 aa9.14□□□□□ -0.95
MCF2L-216ENST00000439475 CHRNB3Q05901 458 aa9.14□□□□□ -0.95
MCF2L-216ENST00000439475 RPL18Q07020 188 aaKnown RBP9.14□□□□□ -0.95
MCF2L-216ENST00000439475 ETFDHQ16134 617 aa9.14□□□□□ -0.95
MCF2L-216ENST00000439475 ALG10Q5BKT4 473 aa9.14□□□□□ -0.95
MCF2L-216ENST00000439475 Q5PR19 223 aa9.14□□□□□ -0.95
MCF2L-216ENST00000439475 PHYHD1Q5SRE7 291 aa9.14□□□□□ -0.95
MCF2L-216ENST00000439475 NHLRC1Q6VVB1 395 aa9.14□□□□□ -0.95
MCF2L-216ENST00000439475 PIWIL3Q7Z3Z3 882 aaKnown RBP9.14□□□□□ -0.95
MCF2L-216ENST00000439475 DEFB107AQ8IZN7 70 aa9.14□□□□□ -0.95
MCF2L-216ENST00000439475 ARHGAP24Q8N264 748 aa9.14□□□□□ -0.95
MCF2L-216ENST00000439475 MUC15Q8N387 334 aa9.14□□□□□ -0.95
MCF2L-216ENST00000439475 RNF148Q8N7C7 305 aa9.14□□□□□ -0.95
MCF2L-216ENST00000439475 OR4F15Q8NGB8 312 aa9.14□□□□□ -0.95
MCF2L-216ENST00000439475 FNDC8Q8TC99 324 aa9.14□□□□□ -0.95
MCF2L-216ENST00000439475 TMEM54Q969K7 222 aa9.14□□□□□ -0.95
MCF2L-216ENST00000439475 PYURFQ96I23 114 aa9.14□□□□□ -0.95
MCF2L-216ENST00000439475 NSMCE2Q96MF7 247 aa9.14□□□□□ -0.95
MCF2L-216ENST00000439475 FOXB1Q99853 325 aa9.14□□□□□ -0.95
MCF2L-216ENST00000439475 KATNB1Q9BVA0 655 aa9.14□□□□□ -0.95
MCF2L-216ENST00000439475 KCNN2Q9H2S1 579 aa9.14□□□□□ -0.95
MCF2L-216ENST00000439475 DENND2DQ9H6A0 471 aaPredicted RBP9.14□□□□□ -0.95
MCF2L-216ENST00000439475 CBLN4Q9NTU7 201 aa9.14□□□□□ -0.95
MCF2L-216ENST00000439475 C20orf141Q9NUB4 165 aa9.14□□□□□ -0.95
MCF2L-216ENST00000439475 RHCGQ9UBD6 479 aa9.14□□□□□ -0.95
MCF2L-216ENST00000439475 CRNNQ9UBG3 495 aaPredicted RBP9.14□□□□□ -0.95
MCF2L-216ENST00000439475 FBXL3Q9UKT7 428 aa9.14□□□□□ -0.95
MCF2L-216ENST00000439475 TMEM5Q9Y2B1 443 aa9.14□□□□□ -0.95
MCF2L-216ENST00000439475 PMF1-BGLAPU3KQ54 211 aa9.14□□□□□ -0.95
MCF2L-216ENST00000439475 ALPK2Q86TB3 2170 aa9.14□□□□□ -0.95
MCF2L-216ENST00000439475 ARID1AO14497 2285 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms