RNA–Protein interactions for RNA: ENST00000431390.5

HMGN1-206, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-206ENST00000431390 ZNF708P17019 499 aa16.3■□□□□ 0.2
HMGN1-206ENST00000431390 SUCLG1P53597 346 aaKnown RBP16.3■□□□□ 0.2
HMGN1-206ENST00000431390 CARD18P57730 90 aa16.3■□□□□ 0.2
HMGN1-206ENST00000431390 HSF1Q00613 529 aa16.3■□□□□ 0.2
HMGN1-206ENST00000431390 PMP22Q01453 160 aa16.3■□□□□ 0.2
HMGN1-206ENST00000431390 POU3F1Q03052 451 aaPredicted RBP16.3■□□□□ 0.2
HMGN1-206ENST00000431390 IGFBP7Q16270 282 aa16.3■□□□□ 0.2
HMGN1-206ENST00000431390 ARMC4Q5T2S8 1044 aa16.3■□□□□ 0.2
HMGN1-206ENST00000431390 TMEM225Q6GV28 225 aa16.3■□□□□ 0.2
HMGN1-206ENST00000431390 RPUSD3Q6P087 351 aaKnown RBP16.3■□□□□ 0.2
HMGN1-206ENST00000431390 LEG1Q6P5S2 330 aa16.3■□□□□ 0.2
HMGN1-206ENST00000431390 MEPCEQ7L2J0 689 aaKnown RBP16.3■□□□□ 0.2
HMGN1-206ENST00000431390 UEVLDQ8IX04 471 aa16.3■□□□□ 0.2
HMGN1-206ENST00000431390 CYB561A3Q8NBI2 242 aa16.3■□□□□ 0.2
HMGN1-206ENST00000431390 BBS1Q8NFJ9 593 aa16.3■□□□□ 0.2
HMGN1-206ENST00000431390 ABTB1Q969K4 478 aaPredicted RBP16.3■□□□□ 0.2
HMGN1-206ENST00000431390 OTULINQ96BN8 352 aa16.3■□□□□ 0.2
HMGN1-206ENST00000431390 NMNAT3Q96T66 252 aa16.3■□□□□ 0.2
HMGN1-206ENST00000431390 TIGARQ9NQ88 270 aa16.3■□□□□ 0.2
HMGN1-206ENST00000431390 ERVK-18Q9QC07 812 aa16.3■□□□□ 0.2
HMGN1-206ENST00000431390 SNX5Q9Y5X3 404 aa16.3■□□□□ 0.2
HMGN1-206ENST00000431390 RELNP78509 3460 aa16.29■□□□□ 0.2
HMGN1-206ENST00000431390 TRGV5A0A0B4J1U4 118 aa16.29■□□□□ 0.2
HMGN1-206ENST00000431390 A6NIZ1 184 aa16.29■□□□□ 0.2
HMGN1-206ENST00000431390 SLC22A31A6NKX4 558 aa16.29■□□□□ 0.2
HMGN1-206ENST00000431390 ZNF814B7Z6K7 855 aa16.29■□□□□ 0.2
HMGN1-206ENST00000431390 NPIPA5E9PKD4 350 aa16.29■□□□□ 0.2
HMGN1-206ENST00000431390 XKRYO14609 159 aa16.29■□□□□ 0.2
HMGN1-206ENST00000431390 SERPINI2O75830 405 aa16.29■□□□□ 0.2
HMGN1-206ENST00000431390 IGHG3P01860 377 aa16.29■□□□□ 0.2
HMGN1-206ENST00000431390 CDK1P06493 297 aa16.29■□□□□ 0.2
HMGN1-206ENST00000431390 HLA-DOBP13765 273 aa16.29■□□□□ 0.2
HMGN1-206ENST00000431390 SLC2A5P22732 501 aa16.29■□□□□ 0.2
HMGN1-206ENST00000431390 ACVR1BP36896 505 aa16.29■□□□□ 0.2
HMGN1-206ENST00000431390 CDKN2AP42771 156 aaKnown RBP16.29■□□□□ 0.2
HMGN1-206ENST00000431390 MTNR1AP48039 350 aa16.29■□□□□ 0.2
HMGN1-206ENST00000431390 SLC25A1P53007 311 aa16.29■□□□□ 0.2
HMGN1-206ENST00000431390 CLDN18P56856 261 aa16.29■□□□□ 0.2
HMGN1-206ENST00000431390 RAP1BP61224 184 aa16.29■□□□□ 0.2
HMGN1-206ENST00000431390 RAP1AP62834 184 aa16.29■□□□□ 0.2
HMGN1-206ENST00000431390 POU4F3Q15319 338 aa16.29■□□□□ 0.2
HMGN1-206ENST00000431390 INAQ16352 499 aa16.29■□□□□ 0.2
HMGN1-206ENST00000431390 KLHL22Q53GT1 634 aa16.29■□□□□ 0.2
HMGN1-206ENST00000431390 NHLRC1Q6VVB1 395 aa16.29■□□□□ 0.2
HMGN1-206ENST00000431390 SLC35D2Q76EJ3 337 aa16.29■□□□□ 0.2
HMGN1-206ENST00000431390 UBQLNLQ8IYU4 475 aa16.29■□□□□ 0.2
HMGN1-206ENST00000431390 SPARTQ8N0X7 666 aa16.29■□□□□ 0.2
HMGN1-206ENST00000431390 KDM8Q8N371 416 aa16.29■□□□□ 0.2
HMGN1-206ENST00000431390 STX19Q8N4C7 294 aa16.29■□□□□ 0.2
HMGN1-206ENST00000431390 MEIOBQ8N635 442 aa16.29■□□□□ 0.2
HMGN1-206ENST00000431390 RBMXL3Q8N7X1 1067 aaKnown RBP16.29■□□□□ 0.2
HMGN1-206ENST00000431390 CPNE4Q96A23 557 aaPredicted RBP16.29■□□□□ 0.2
HMGN1-206ENST00000431390 ABHD17AQ96GS6 310 aa16.29■□□□□ 0.2
HMGN1-206ENST00000431390 HCAR1Q9BXC0 346 aa16.29■□□□□ 0.2
HMGN1-206ENST00000431390 SRXN1Q9BYN0 137 aa16.29■□□□□ 0.2
HMGN1-206ENST00000431390 NMNAT2Q9BZQ4 307 aa16.29■□□□□ 0.2
HMGN1-206ENST00000431390 DEFB127Q9H1M4 99 aa16.29■□□□□ 0.2
HMGN1-206ENST00000431390 LDAHQ9H6V9 325 aa16.29■□□□□ 0.2
HMGN1-206ENST00000431390 MED20Q9H944 212 aa16.29■□□□□ 0.2
HMGN1-206ENST00000431390 WARS2Q9UGM6 360 aaKnown RBP16.29■□□□□ 0.2
HMGN1-206ENST00000431390 NPIPA1Q9UND3 350 aa16.29■□□□□ 0.2
HMGN1-206ENST00000431390 OR6C68A6NDL8 312 aa16.28■□□□□ 0.2
HMGN1-206ENST00000431390 H0YC42 278 aa16.28■□□□□ 0.2
HMGN1-206ENST00000431390 BCL10O95999 233 aa16.28■□□□□ 0.2
HMGN1-206ENST00000431390 RENP00797 406 aa16.28■□□□□ 0.2
HMGN1-206ENST00000431390 ENPP1P22413 925 aa16.28■□□□□ 0.2
HMGN1-206ENST00000431390 NR1H2P55055 460 aa16.28■□□□□ 0.2
HMGN1-206ENST00000431390 CLDN15P56746 228 aa16.28■□□□□ 0.2
HMGN1-206ENST00000431390 PIGFQ07326 219 aa16.28■□□□□ 0.2
HMGN1-206ENST00000431390 LGALS3BPQ08380 585 aa16.28■□□□□ 0.2
HMGN1-206ENST00000431390 ST3GAL4Q11206 333 aa16.28■□□□□ 0.2
HMGN1-206ENST00000431390 RAB40BQ12829 278 aa16.28■□□□□ 0.2
HMGN1-206ENST00000431390 VASNQ6EMK4 673 aa16.28■□□□□ 0.2
HMGN1-206ENST00000431390 OR10D3Q8NH80 312 aa16.28■□□□□ 0.2
HMGN1-206ENST00000431390 ASB10Q8WXI3 467 aa16.28■□□□□ 0.2
HMGN1-206ENST00000431390 CCDC90BQ9GZT6 254 aa16.28■□□□□ 0.2
HMGN1-206ENST00000431390 BATF3Q9NR55 127 aa16.28■□□□□ 0.2
HMGN1-206ENST00000431390 PAQR5Q9NXK6 330 aaPredicted RBP16.28■□□□□ 0.2
HMGN1-206ENST00000431390 B3GNT3Q9Y2A9 372 aa16.28■□□□□ 0.2
HMGN1-206ENST00000431390 PCDHGB1Q9Y5G3 927 aa16.28■□□□□ 0.2
HMGN1-206ENST00000431390 LIPGQ9Y5X9 500 aa16.28■□□□□ 0.2
HMGN1-206ENST00000431390 FLNCQ14315 2725 aa16.28■□□□□ 0.2
HMGN1-206ENST00000431390 K7EM74 188 aa16.27■□□□□ 0.2
HMGN1-206ENST00000431390 ARHGEF9O43307 516 aa16.27■□□□□ 0.2
HMGN1-206ENST00000431390 CXCL13O43927 109 aa16.27■□□□□ 0.2
HMGN1-206ENST00000431390 TFAP2AP05549 437 aa16.27■□□□□ 0.2
HMGN1-206ENST00000431390 IFNGR1P15260 489 aa16.27■□□□□ 0.2
HMGN1-206ENST00000431390 ZNF43P17038 809 aa16.27■□□□□ 0.2
HMGN1-206ENST00000431390 EIF1AXP47813 144 aaKnown RBP16.27■□□□□ 0.2
HMGN1-206ENST00000431390 RPS3AP61247 264 aaKnown RBP16.27■□□□□ 0.2
HMGN1-206ENST00000431390 SLC35D3Q5M8T2 416 aa16.27■□□□□ 0.2
HMGN1-206ENST00000431390 HDDC2Q7Z4H3 204 aa16.27■□□□□ 0.2
HMGN1-206ENST00000431390 SVOPQ8N4V2 548 aa16.27■□□□□ 0.2
HMGN1-206ENST00000431390 RNFT2Q96EX2 444 aa16.27■□□□□ 0.2
HMGN1-206ENST00000431390 SF3B5Q9BWJ5 86 aaKnown RBP16.27■□□□□ 0.2
HMGN1-206ENST00000431390 OR51V1Q9H2C8 321 aa16.27■□□□□ 0.2
HMGN1-206ENST00000431390 VCX3AQ9NNX9 186 aa16.27■□□□□ 0.2
HMGN1-206ENST00000431390 HAO2Q9NYQ3 351 aa16.27■□□□□ 0.2
HMGN1-206ENST00000431390 TUBD1Q9UJT1 453 aa16.27■□□□□ 0.2
HMGN1-206ENST00000431390 PRSS37A4D1T9 235 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms