RNA–Protein interactions for RNA: ENST00000424880.2

SEC61A1-202, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 3,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-202ENST00000424880 C1QTNF2Q9BXJ5 285 aa10.32□□□□□ -0.76
SEC61A1-202ENST00000424880 TRPV4Q9HBA0 871 aa10.32□□□□□ -0.76
SEC61A1-202ENST00000424880 CLDND1Q9NY35 253 aa10.32□□□□□ -0.76
SEC61A1-202ENST00000424880 MYO7AQ13402 2215 aa10.32□□□□□ -0.76
SEC61A1-202ENST00000424880 FAM86C2PA6NEL3 165 aa10.32□□□□□ -0.76
SEC61A1-202ENST00000424880 PHYHO14832 338 aa10.32□□□□□ -0.76
SEC61A1-202ENST00000424880 CTNSO60931 367 aa10.32□□□□□ -0.76
SEC61A1-202ENST00000424880 NDUFB7P17568 137 aa10.32□□□□□ -0.76
SEC61A1-202ENST00000424880 GABRR2P28476 465 aa10.32□□□□□ -0.76
SEC61A1-202ENST00000424880 METAP1P53582 386 aa10.32□□□□□ -0.76
SEC61A1-202ENST00000424880 MISPQ8IVT2 679 aa10.32□□□□□ -0.76
SEC61A1-202ENST00000424880 ARL6IP6Q8N6S5 226 aa10.32□□□□□ -0.76
SEC61A1-202ENST00000424880 WDSUB1Q8N9V3 476 aa10.32□□□□□ -0.76
SEC61A1-202ENST00000424880 HS6ST2Q96MM7 605 aa10.32□□□□□ -0.76
SEC61A1-202ENST00000424880 APMAPQ9HDC9 416 aa10.32□□□□□ -0.76
SEC61A1-202ENST00000424880 FAM86C1Q9NVL1 165 aa10.32□□□□□ -0.76
SEC61A1-202ENST00000424880 TREM2Q9NZC2 230 aa10.32□□□□□ -0.76
SEC61A1-202ENST00000424880 COMMD9Q9P000 198 aa10.32□□□□□ -0.76
SEC61A1-202ENST00000424880 PCDHGA1Q9Y5H4 931 aa10.32□□□□□ -0.76
SEC61A1-202ENST00000424880 TRAV1-2A0A0B4J238 106 aa10.31□□□□□ -0.76
SEC61A1-202ENST00000424880 A0A1B0GV50 99 aa10.31□□□□□ -0.76
SEC61A1-202ENST00000424880 SLC5A10A0PJK1 596 aa10.31□□□□□ -0.76
SEC61A1-202ENST00000424880 SLC22A31A6NKX4 558 aa10.31□□□□□ -0.76
SEC61A1-202ENST00000424880 GNRH1P01148 92 aa10.31□□□□□ -0.76
SEC61A1-202ENST00000424880 HLA-AP01891 365 aaKnown RBP10.31□□□□□ -0.76
SEC61A1-202ENST00000424880 RPN2P04844 631 aa10.31□□□□□ -0.76
SEC61A1-202ENST00000424880 ZNF28P17035 718 aa10.31□□□□□ -0.76
SEC61A1-202ENST00000424880 CD80P33681 288 aa10.31□□□□□ -0.76
SEC61A1-202ENST00000424880 LTBQ06643 244 aa10.31□□□□□ -0.76
SEC61A1-202ENST00000424880 NKAPLQ5M9Q1 402 aa10.31□□□□□ -0.76
SEC61A1-202ENST00000424880 ZNF793Q6ZN11 406 aa10.31□□□□□ -0.76
SEC61A1-202ENST00000424880 TTLL10Q6ZVT0 673 aa10.31□□□□□ -0.76
SEC61A1-202ENST00000424880 GALNT16Q8N428 558 aa10.31□□□□□ -0.76
SEC61A1-202ENST00000424880 CDS1Q92903 461 aa10.31□□□□□ -0.76
SEC61A1-202ENST00000424880 AKR1E2Q96JD6 320 aa10.31□□□□□ -0.76
SEC61A1-202ENST00000424880 TCF7L1Q9HCS4 588 aa10.31□□□□□ -0.76
SEC61A1-202ENST00000424880 STEAP1Q9UHE8 339 aa10.31□□□□□ -0.76
SEC61A1-202ENST00000424880 PLXNA3P51805 1871 aa10.31□□□□□ -0.76
SEC61A1-202ENST00000424880 TRAV8-7A0A075B6U6 113 aa10.31□□□□□ -0.76
SEC61A1-202ENST00000424880 MED19A0JLT2 244 aaPredicted RBP10.31□□□□□ -0.76
SEC61A1-202ENST00000424880 RIIAD1A6NNX1 92 aa10.31□□□□□ -0.76
SEC61A1-202ENST00000424880 BCL2L11O43521 198 aa10.31□□□□□ -0.76
SEC61A1-202ENST00000424880 LATO43561 262 aa10.31□□□□□ -0.76
SEC61A1-202ENST00000424880 DCNP07585 359 aaKnown RBP10.31□□□□□ -0.76
SEC61A1-202ENST00000424880 ABOP16442 354 aa10.31□□□□□ -0.76
SEC61A1-202ENST00000424880 CASRP41180 1078 aa10.31□□□□□ -0.76
SEC61A1-202ENST00000424880 RIDAP52758 137 aaKnown RBP10.31□□□□□ -0.76
SEC61A1-202ENST00000424880 CASP6P55212 293 aa10.31□□□□□ -0.76
SEC61A1-202ENST00000424880 KLHL26Q53HC5 615 aa10.31□□□□□ -0.76
SEC61A1-202ENST00000424880 C11orf87Q6NUJ2 197 aa10.31□□□□□ -0.76
SEC61A1-202ENST00000424880 CRIPAKQ8N1N5 446 aa10.31□□□□□ -0.76
SEC61A1-202ENST00000424880 OR9A1PQ8NGU1 263 aa10.31□□□□□ -0.76
SEC61A1-202ENST00000424880 OR5K2Q8NHB8 316 aa10.31□□□□□ -0.76
SEC61A1-202ENST00000424880 RAB7BQ96AH8 199 aa10.31□□□□□ -0.76
SEC61A1-202ENST00000424880 ALX4Q9H161 411 aaPredicted RBP10.31□□□□□ -0.76
SEC61A1-202ENST00000424880 CWH43Q9H720 699 aa10.31□□□□□ -0.76
SEC61A1-202ENST00000424880 KRCC1Q9NPI7 259 aaPredicted RBP10.31□□□□□ -0.76
SEC61A1-202ENST00000424880 A0A1W2PPH5 198 aa10.31□□□□□ -0.76
SEC61A1-202ENST00000424880 TSPAN11A1L157 253 aa10.31□□□□□ -0.76
SEC61A1-202ENST00000424880 C4orf51C9J302 202 aa10.31□□□□□ -0.76
SEC61A1-202ENST00000424880 VEGFDO43915 354 aa10.31□□□□□ -0.76
SEC61A1-202ENST00000424880 SOCS5O75159 536 aa10.31□□□□□ -0.76
SEC61A1-202ENST00000424880 SERPINA5P05154 406 aa10.31□□□□□ -0.76
SEC61A1-202ENST00000424880 SFTA3P0C7M3 94 aa10.31□□□□□ -0.76
SEC61A1-202ENST00000424880 OR8U8P0C7N1 319 aa10.31□□□□□ -0.76
SEC61A1-202ENST00000424880 SELPP16109 830 aa10.31□□□□□ -0.76
SEC61A1-202ENST00000424880 HMGA1P17096 107 aaKnown RBP10.31□□□□□ -0.76
SEC61A1-202ENST00000424880 TYRP1P17643 537 aa10.31□□□□□ -0.76
SEC61A1-202ENST00000424880 VAMP1P23763 118 aa10.31□□□□□ -0.76
SEC61A1-202ENST00000424880 ACTR1BP42025 376 aa10.31□□□□□ -0.76
SEC61A1-202ENST00000424880 KHKP50053 298 aa10.31□□□□□ -0.76
SEC61A1-202ENST00000424880 TAS2R38P59533 333 aa10.31□□□□□ -0.76
SEC61A1-202ENST00000424880 SNRPD1P62314 119 aaKnown RBP10.31□□□□□ -0.76
SEC61A1-202ENST00000424880 DEFA6Q01524 100 aa10.31□□□□□ -0.76
SEC61A1-202ENST00000424880 ID2Q02363 134 aa10.31□□□□□ -0.76
SEC61A1-202ENST00000424880 POU4F2Q12837 409 aa10.31□□□□□ -0.76
SEC61A1-202ENST00000424880 EIF2B1Q14232 305 aaKnown RBP10.31□□□□□ -0.76
SEC61A1-202ENST00000424880 KRT33BQ14525 404 aa10.31□□□□□ -0.76
SEC61A1-202ENST00000424880 CDNFQ49AH0 187 aa10.31□□□□□ -0.76
SEC61A1-202ENST00000424880 HENMT1Q5T8I9 393 aaKnown RBP10.31□□□□□ -0.76
SEC61A1-202ENST00000424880 OLFML2AQ68BL7 652 aa10.31□□□□□ -0.76
SEC61A1-202ENST00000424880 OR4C11Q6IEV9 310 aa10.31□□□□□ -0.76
SEC61A1-202ENST00000424880 C3orf33Q6P1S2 294 aa10.31□□□□□ -0.76
SEC61A1-202ENST00000424880 UBE3DQ7Z6J8 389 aa10.31□□□□□ -0.76
SEC61A1-202ENST00000424880 FOXRED2Q8IWF2 684 aa10.31□□□□□ -0.76
SEC61A1-202ENST00000424880 FAM24BQ8N5W8 94 aa10.31□□□□□ -0.76
SEC61A1-202ENST00000424880 FBXO22Q8NEZ5 403 aa10.31□□□□□ -0.76
SEC61A1-202ENST00000424880 CYB5D2Q8WUJ1 264 aa10.31□□□□□ -0.76
SEC61A1-202ENST00000424880 ASB13Q8WXK3 278 aa10.31□□□□□ -0.76
SEC61A1-202ENST00000424880 BPIFA2Q96DR5 249 aa10.31□□□□□ -0.76
SEC61A1-202ENST00000424880 TMEM68Q96MH6 324 aa10.31□□□□□ -0.76
SEC61A1-202ENST00000424880 NECAB3Q96P71 396 aaPredicted RBP10.31□□□□□ -0.76
SEC61A1-202ENST00000424880 CASD1Q96PB1 797 aa10.31□□□□□ -0.76
SEC61A1-202ENST00000424880 PIGQQ9BRB3 760 aa10.31□□□□□ -0.76
SEC61A1-202ENST00000424880 KLF16Q9BXK1 252 aaPredicted RBP10.31□□□□□ -0.76
SEC61A1-202ENST00000424880 XKR8Q9H6D3 395 aa10.31□□□□□ -0.76
SEC61A1-202ENST00000424880 TM7SF3Q9NS93 570 aa10.31□□□□□ -0.76
SEC61A1-202ENST00000424880 TNFSF18Q9UNG2 199 aa10.31□□□□□ -0.76
SEC61A1-202ENST00000424880 DENND4CQ5VZ89 1909 aa10.3□□□□□ -0.76
SEC61A1-202ENST00000424880 TRAPPC13A5PLN9 417 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms