RNA–Protein interactions for RNA: ENST00000421939.5

CDK9-202, Transcript of cyclin dependent kinase 9, humanhuman

TSL 3

Gene CDK9, Length 702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-202ENST00000421939 ADAD1Q96M93 576 aaKnown RBP23.08■■□□□ 1.29
CDK9-202ENST00000421939 CDRT15Q96T59 188 aa23.08■■□□□ 1.29
CDK9-202ENST00000421939 ULBP2Q9BZM5 246 aa23.08■■□□□ 1.29
CDK9-202ENST00000421939 DCAF13Q9NV06 445 aaKnown RBP23.08■■□□□ 1.29
CDK9-202ENST00000421939 ENPP4Q9Y6X5 453 aa23.08■■□□□ 1.29
CDK9-202ENST00000421939 ARID1AO14497 2285 aa23.07■■□□□ 1.28
CDK9-202ENST00000421939 PLCE1Q9P212 2302 aa23.07■■□□□ 1.28
CDK9-202ENST00000421939 ZNF99A8MXY4 864 aaPredicted RBP23.07■■□□□ 1.28
CDK9-202ENST00000421939 TMCC2O75069 709 aa23.07■■□□□ 1.28
CDK9-202ENST00000421939 PRSS23O95084 383 aa23.07■■□□□ 1.28
CDK9-202ENST00000421939 CSNK1A1P48729 337 aa23.07■■□□□ 1.28
CDK9-202ENST00000421939 RPL18Q07020 188 aaKnown RBP23.07■■□□□ 1.28
CDK9-202ENST00000421939 SLC22A25Q6T423 547 aa23.07■■□□□ 1.28
CDK9-202ENST00000421939 CYP4Z1Q86W10 505 aa23.07■■□□□ 1.28
CDK9-202ENST00000421939 TGIF2LYQ8IUE0 185 aa23.07■■□□□ 1.28
CDK9-202ENST00000421939 DEFB107AQ8IZN7 70 aa23.07■■□□□ 1.28
CDK9-202ENST00000421939 OR6X1Q8NH79 312 aa23.07■■□□□ 1.28
CDK9-202ENST00000421939 GORASP2Q9H8Y8 452 aa23.07■■□□□ 1.28
CDK9-202ENST00000421939 CD300AQ9UGN4 299 aa23.07■■□□□ 1.28
CDK9-202ENST00000421939 VPS13CQ709C8 3753 aa23.06■■□□□ 1.28
CDK9-202ENST00000421939 HTR3EA5X5Y0 456 aa23.06■■□□□ 1.28
CDK9-202ENST00000421939 IFI30P13284 250 aa23.06■■□□□ 1.28
CDK9-202ENST00000421939 HOXB1P14653 301 aaPredicted RBP23.06■■□□□ 1.28
CDK9-202ENST00000421939 PAX7P23759 505 aa23.06■■□□□ 1.28
CDK9-202ENST00000421939 NKX6-1P78426 367 aaPredicted RBP23.06■■□□□ 1.28
CDK9-202ENST00000421939 MELKQ14680 651 aa23.06■■□□□ 1.28
CDK9-202ENST00000421939 SMAP2Q8WU79 429 aaPredicted RBP23.06■■□□□ 1.28
CDK9-202ENST00000421939 BPIFA2Q96DR5 249 aa23.06■■□□□ 1.28
CDK9-202ENST00000421939 CXorf56Q9H5V9 222 aa23.06■■□□□ 1.28
CDK9-202ENST00000421939 CISD1Q9NZ45 108 aaKnown RBP23.06■■□□□ 1.28
CDK9-202ENST00000421939 POU2F3Q9UKI9 436 aa23.06■■□□□ 1.28
CDK9-202ENST00000421939 LAMP3Q9UQV4 416 aa23.06■■□□□ 1.28
CDK9-202ENST00000421939 SEC14L2O76054 403 aa23.05■■□□□ 1.28
CDK9-202ENST00000421939 SOD3P08294 240 aa23.05■■□□□ 1.28
CDK9-202ENST00000421939 AQP2P41181 271 aa23.05■■□□□ 1.28
CDK9-202ENST00000421939 TUBA1BP68363 451 aa23.05■■□□□ 1.28
CDK9-202ENST00000421939 TUBA4AP68366 448 aa23.05■■□□□ 1.28
CDK9-202ENST00000421939 ADAM8P78325 824 aa23.05■■□□□ 1.28
CDK9-202ENST00000421939 LSM11P83369 360 aaKnown RBP eCLIP23.05■■□□□ 1.28
CDK9-202ENST00000421939 TUBA1AQ71U36 451 aa23.05■■□□□ 1.28
CDK9-202ENST00000421939 TSEN54Q7Z6J9 526 aaKnown RBP23.05■■□□□ 1.28
CDK9-202ENST00000421939 KRTAP1-3Q8IUG1 177 aa23.05■■□□□ 1.28
CDK9-202ENST00000421939 NRMQ8IXM6 262 aa23.05■■□□□ 1.28
CDK9-202ENST00000421939 DEPDC4Q8N2C3 294 aa23.05■■□□□ 1.28
CDK9-202ENST00000421939 FAM86B1Q8N7N1 296 aa23.05■■□□□ 1.28
CDK9-202ENST00000421939 ACOT11Q8WXI4 607 aaPredicted RBP23.05■■□□□ 1.28
CDK9-202ENST00000421939 PERPQ96FX8 193 aa23.05■■□□□ 1.28
CDK9-202ENST00000421939 SLC25A44Q96H78 314 aaPredicted RBP23.05■■□□□ 1.28
CDK9-202ENST00000421939 MOV10Q9HCE1 1003 aaKnown RBP23.05■■□□□ 1.28
CDK9-202ENST00000421939 ADAM21Q9UKJ8 722 aa23.05■■□□□ 1.28
CDK9-202ENST00000421939 FLNAP21333 2647 aaKnown RBP23.05■■□□□ 1.28
CDK9-202ENST00000421939 A0A1W2PRG6 482 aa23.04■■□□□ 1.28
CDK9-202ENST00000421939 BCL10O95999 233 aa23.04■■□□□ 1.28
CDK9-202ENST00000421939 TSPAN19P0C672 248 aa23.04■■□□□ 1.28
CDK9-202ENST00000421939 DANCRP0C864 163 aa23.04■■□□□ 1.28
CDK9-202ENST00000421939 RPS4XP62701 263 aaKnown RBP23.04■■□□□ 1.28
CDK9-202ENST00000421939 PGGHGQ32M88 737 aa23.04■■□□□ 1.28
CDK9-202ENST00000421939 SPATS1Q496A3 300 aa23.04■■□□□ 1.28
CDK9-202ENST00000421939 ZNF730Q6ZMV8 503 aa23.04■■□□□ 1.28
CDK9-202ENST00000421939 WFDC11Q8NEX6 87 aa23.04■■□□□ 1.28
CDK9-202ENST00000421939 MOSPD2Q8NHP6 518 aa23.04■■□□□ 1.28
CDK9-202ENST00000421939 TMEM54Q969K7 222 aa23.04■■□□□ 1.28
CDK9-202ENST00000421939 ZNF566Q969W8 418 aa23.04■■□□□ 1.28
CDK9-202ENST00000421939 NSL1Q96IY1 281 aa23.04■■□□□ 1.28
CDK9-202ENST00000421939 SLC38A2Q96QD8 506 aa23.04■■□□□ 1.28
CDK9-202ENST00000421939 GSX2Q9BZM3 304 aa23.04■■□□□ 1.28
CDK9-202ENST00000421939 ANKRD19PQ9H560 264 aa23.04■■□□□ 1.28
CDK9-202ENST00000421939 NMNAT1Q9HAN9 279 aaPredicted RBP23.04■■□□□ 1.28
CDK9-202ENST00000421939 INIPQ9NRY2 104 aa23.04■■□□□ 1.28
CDK9-202ENST00000421939 NDUFAF4Q9P032 175 aa23.04■■□□□ 1.28
CDK9-202ENST00000421939 POFUT2Q9Y2G5 429 aa23.04■■□□□ 1.28
CDK9-202ENST00000421939 V9GYQ6 96 aa23.04■■□□□ 1.28
CDK9-202ENST00000421939 USF3Q68DE3 2245 aa23.03■■□□□ 1.28
CDK9-202ENST00000421939 MED13LQ71F56 2210 aa23.03■■□□□ 1.28
CDK9-202ENST00000421939 ARPC2O15144 300 aa23.03■■□□□ 1.28
CDK9-202ENST00000421939 ARHGEF9O43307 516 aa23.03■■□□□ 1.28
CDK9-202ENST00000421939 F13BP05160 661 aa23.03■■□□□ 1.28
CDK9-202ENST00000421939 MSX2P35548 267 aaPredicted RBP23.03■■□□□ 1.28
CDK9-202ENST00000421939 PTH2RP49190 550 aa23.03■■□□□ 1.28
CDK9-202ENST00000421939 Q5PR19 223 aa23.03■■□□□ 1.28
CDK9-202ENST00000421939 SHEQ5VZ18 495 aa23.03■■□□□ 1.28
CDK9-202ENST00000421939 B3GLCTQ6Y288 498 aa23.03■■□□□ 1.28
CDK9-202ENST00000421939 CCDC36Q8IYA8 594 aa23.03■■□□□ 1.28
CDK9-202ENST00000421939 NSMCE2Q96MF7 247 aa23.03■■□□□ 1.28
CDK9-202ENST00000421939 ZNF701Q9NV72 531 aaPredicted RBP23.03■■□□□ 1.28
CDK9-202ENST00000421939 FAIMQ9NVQ4 179 aa23.03■■□□□ 1.28
CDK9-202ENST00000421939 GLTPQ9NZD2 209 aa23.03■■□□□ 1.28
CDK9-202ENST00000421939 CRNNQ9UBG3 495 aaPredicted RBP23.03■■□□□ 1.28
CDK9-202ENST00000421939 HIF3AQ9Y2N7 669 aa23.03■■□□□ 1.28
CDK9-202ENST00000421939 FAM32AQ9Y421 112 aaKnown RBP23.03■■□□□ 1.28
CDK9-202ENST00000421939 ZNF469Q96JG9 3925 aaPredicted RBP23.02■■□□□ 1.28
CDK9-202ENST00000421939 A0A087WUU8 490 aa23.02■■□□□ 1.28
CDK9-202ENST00000421939 IGHV1-18A0A0C4DH31 117 aa23.02■■□□□ 1.28
CDK9-202ENST00000421939 MCIDASD6RGH6 385 aa23.02■■□□□ 1.28
CDK9-202ENST00000421939 IGHG1P01857 330 aa23.02■■□□□ 1.28
CDK9-202ENST00000421939 PGA4P0DJD7 388 aa23.02■■□□□ 1.28
CDK9-202ENST00000421939 PGA3P0DJD8 388 aa23.02■■□□□ 1.28
CDK9-202ENST00000421939 SAGP10523 405 aaPredicted RBP23.02■■□□□ 1.28
CDK9-202ENST00000421939 PAX1P15863 534 aa23.02■■□□□ 1.28
CDK9-202ENST00000421939 DAP3P51398 398 aaKnown RBP23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms