RNA–Protein interactions for RNA: ENST00000415083.6

SS18-203, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SS18, Length 3,414 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-203ENST00000415083 OR5M1Q8NGP8 315 aa8.95□□□□□ -0.98
SS18-203ENST00000415083 CCDC74AQ96AQ1 378 aa8.95□□□□□ -0.98
SS18-203ENST00000415083 LINC00052Q96N35 136 aa8.95□□□□□ -0.98
SS18-203ENST00000415083 LRFN5Q96NI6 719 aa8.95□□□□□ -0.98
SS18-203ENST00000415083 LPAR4Q99677 370 aa8.95□□□□□ -0.98
SS18-203ENST00000415083 ARPC5LQ9BPX5 153 aa8.95□□□□□ -0.98
SS18-203ENST00000415083 SPRTNQ9H040 489 aaPredicted RBP8.95□□□□□ -0.98
SS18-203ENST00000415083 PTTG3PQ9NZH4 202 aa8.95□□□□□ -0.98
SS18-203ENST00000415083 FBXL21Q9UKT6 434 aa8.95□□□□□ -0.98
SS18-203ENST00000415083 ERVK-19Q9WJR5 959 aa8.95□□□□□ -0.98
SS18-203ENST00000415083 ZNF337Q9Y3M9 751 aa8.95□□□□□ -0.98
SS18-203ENST00000415083 URADA6NGE7 173 aa8.95□□□□□ -0.98
SS18-203ENST00000415083 OR6C65A6NJZ3 312 aa8.95□□□□□ -0.98
SS18-203ENST00000415083 POM121CA8CG34 1229 aa8.95□□□□□ -0.98
SS18-203ENST00000415083 GLSO94925 669 aaPredicted RBP8.95□□□□□ -0.98
SS18-203ENST00000415083 PTGS2P35354 604 aa8.95□□□□□ -0.98
SS18-203ENST00000415083 RPL4P36578 427 aaKnown RBP8.95□□□□□ -0.98
SS18-203ENST00000415083 EPHA4P54764 986 aa8.95□□□□□ -0.98
SS18-203ENST00000415083 OC90Q02509 493 aaPredicted RBP8.95□□□□□ -0.98
SS18-203ENST00000415083 HSF2Q03933 536 aa8.95□□□□□ -0.98
SS18-203ENST00000415083 FUT7Q11130 342 aa8.95□□□□□ -0.98
SS18-203ENST00000415083 HYAL4Q2M3T9 481 aa8.95□□□□□ -0.98
SS18-203ENST00000415083 SLC35D3Q5M8T2 416 aa8.95□□□□□ -0.98
SS18-203ENST00000415083 SLC35F3Q8IY50 421 aa8.95□□□□□ -0.98
SS18-203ENST00000415083 SPICQ8N5J4 248 aa8.95□□□□□ -0.98
SS18-203ENST00000415083 GALNT11Q8NCW6 608 aa8.95□□□□□ -0.98
SS18-203ENST00000415083 MIB2Q96AX9 1013 aa8.95□□□□□ -0.98
SS18-203ENST00000415083 FOXN4Q96NZ1 517 aa8.95□□□□□ -0.98
SS18-203ENST00000415083 CACYBPQ9HB71 228 aaKnown RBP8.95□□□□□ -0.98
SS18-203ENST00000415083 RWDD3Q9Y3V2 267 aa8.95□□□□□ -0.98
SS18-203ENST00000415083 CACNA1CQ13936 2221 aa8.95□□□□□ -0.98
SS18-203ENST00000415083 PHF3Q92576 2039 aaKnown RBP8.95□□□□□ -0.98
SS18-203ENST00000415083 WIPF3A6NGB9 483 aa8.95□□□□□ -0.98
SS18-203ENST00000415083 C2orf74A8MZ97 194 aa8.95□□□□□ -0.98
SS18-203ENST00000415083 MCRIP1C9JLW8 97 aa8.95□□□□□ -0.98
SS18-203ENST00000415083 BLOC1S5-TXNDC5H3BN57 136 aa8.95□□□□□ -0.98
SS18-203ENST00000415083 GPRIN2O60269 458 aa8.95□□□□□ -0.98
SS18-203ENST00000415083 SUSD5O60279 629 aa8.95□□□□□ -0.98
SS18-203ENST00000415083 KRT33AO76009 404 aa8.95□□□□□ -0.98
SS18-203ENST00000415083 NDUFB6O95139 128 aa8.95□□□□□ -0.98
SS18-203ENST00000415083 PNPP00491 289 aa8.95□□□□□ -0.98
SS18-203ENST00000415083 ITPKBP27987 946 aa8.95□□□□□ -0.98
SS18-203ENST00000415083 MNDAP41218 407 aa8.95□□□□□ -0.98
SS18-203ENST00000415083 OPCMLQ14982 345 aa8.95□□□□□ -0.98
SS18-203ENST00000415083 TOMM34Q15785 309 aaPredicted RBP8.95□□□□□ -0.98
SS18-203ENST00000415083 ISXQ2M1V0 245 aa8.95□□□□□ -0.98
SS18-203ENST00000415083 ODF4Q2M2E3 257 aa8.95□□□□□ -0.98
SS18-203ENST00000415083 LSM14AQ8ND56 463 aaKnown RBP8.95□□□□□ -0.98
SS18-203ENST00000415083 LIPHQ8WWY8 451 aa8.95□□□□□ -0.98
SS18-203ENST00000415083 PMEPA1Q969W9 287 aa8.95□□□□□ -0.98
SS18-203ENST00000415083 ZC3H10Q96K80 434 aaKnown RBP8.95□□□□□ -0.98
SS18-203ENST00000415083 SFXN2Q96NB2 322 aa8.95□□□□□ -0.98
SS18-203ENST00000415083 MMP25Q9NPA2 562 aa8.95□□□□□ -0.98
SS18-203ENST00000415083 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.95□□□□□ -0.98
SS18-203ENST00000415083 TAS2R5Q9NYW4 299 aa8.95□□□□□ -0.98
SS18-203ENST00000415083 KLHL9Q9P2J3 617 aa8.95□□□□□ -0.98
SS18-203ENST00000415083 MYO9BQ13459 2157 aa8.94□□□□□ -0.98
SS18-203ENST00000415083 ADAM10O14672 748 aa8.94□□□□□ -0.98
SS18-203ENST00000415083 CSTAP01040 98 aa8.94□□□□□ -0.98
SS18-203ENST00000415083 FCER2P06734 321 aa8.94□□□□□ -0.98
SS18-203ENST00000415083 ITGA5P08648 1049 aa8.94□□□□□ -0.98
SS18-203ENST00000415083 HOXD4P09016 255 aaPredicted RBP8.94□□□□□ -0.98
SS18-203ENST00000415083 M6PRP20645 277 aa8.94□□□□□ -0.98
SS18-203ENST00000415083 HNRNPA2B1P22626 353 aaKnown RBP8.94□□□□□ -0.98
SS18-203ENST00000415083 C1orf61Q13536 156 aa8.94□□□□□ -0.98
SS18-203ENST00000415083 HTR4Q13639 388 aa8.94□□□□□ -0.98
SS18-203ENST00000415083 ALKBH1Q13686 389 aaKnown RBP8.94□□□□□ -0.98
SS18-203ENST00000415083 GAS6Q14393 721 aa8.94□□□□□ -0.98
SS18-203ENST00000415083 FAM69AQ5T7M9 428 aa8.94□□□□□ -0.98
SS18-203ENST00000415083 BAIAP2L2Q6UXY1 529 aa8.94□□□□□ -0.98
SS18-203ENST00000415083 SLC43A2Q8N370 569 aa8.94□□□□□ -0.98
SS18-203ENST00000415083 OR8K3Q8NH51 312 aa8.94□□□□□ -0.98
SS18-203ENST00000415083 TAAR8Q969N4 342 aa8.94□□□□□ -0.98
SS18-203ENST00000415083 MCHR2Q969V1 340 aa8.94□□□□□ -0.98
SS18-203ENST00000415083 CLEC4MQ9H2X3 399 aaPredicted RBP8.94□□□□□ -0.98
SS18-203ENST00000415083 SRA1Q9HD15 236 aaKnown RBP8.94□□□□□ -0.98
SS18-203ENST00000415083 MKKSQ9NPJ1 570 aaPredicted RBP8.94□□□□□ -0.98
SS18-203ENST00000415083 MEIS3P1A6NDR6 274 aa8.94□□□□□ -0.98
SS18-203ENST00000415083 MFSD2BA6NFX1 497 aa8.94□□□□□ -0.98
SS18-203ENST00000415083 EFCAB7A8K855 629 aa8.94□□□□□ -0.98
SS18-203ENST00000415083 TNFRSF10CO14798 259 aa8.94□□□□□ -0.98
SS18-203ENST00000415083 OR10H2O60403 315 aa8.94□□□□□ -0.98
SS18-203ENST00000415083 ACSM4P0C7M7 580 aa8.94□□□□□ -0.98
SS18-203ENST00000415083 TSPAN5P62079 268 aa8.94□□□□□ -0.98
SS18-203ENST00000415083 RGS7BPQ6MZT1 257 aaPredicted RBP8.94□□□□□ -0.98
SS18-203ENST00000415083 SLC16A9Q7RTY1 509 aa8.94□□□□□ -0.98
SS18-203ENST00000415083 YAF2Q8IY57 180 aa8.94□□□□□ -0.98
SS18-203ENST00000415083 OR4C16Q8NGL9 310 aa8.94□□□□□ -0.98
SS18-203ENST00000415083 MS4A7Q9GZW8 240 aaPredicted RBP8.94□□□□□ -0.98
SS18-203ENST00000415083 OR10A5Q9H207 317 aa8.94□□□□□ -0.98
SS18-203ENST00000415083 RDH8Q9NYR8 311 aa8.94□□□□□ -0.98
SS18-203ENST00000415083 GMEB2Q9UKD1 530 aa8.94□□□□□ -0.98
SS18-203ENST00000415083 RHBDD3Q9Y3P4 386 aa8.94□□□□□ -0.98
SS18-203ENST00000415083 A0A1W2PPL8 197 aa8.93□□□□□ -0.98
SS18-203ENST00000415083 TXNDC12O95881 172 aa8.93□□□□□ -0.98
SS18-203ENST00000415083 MAS1P04201 325 aa8.93□□□□□ -0.98
SS18-203ENST00000415083 CPN1P15169 458 aa8.93□□□□□ -0.98
SS18-203ENST00000415083 IFNGR1P15260 489 aa8.93□□□□□ -0.98
SS18-203ENST00000415083 ALOX5APP20292 161 aa8.93□□□□□ -0.98
SS18-203ENST00000415083 LCN1P31025 176 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms