RNA–Protein interactions for RNA: ENST00000413872.6

PHRF1-202, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-202ENST00000413872 ZC3HAV1Q7Z2W4 902 aaKnown RBP15.88■□□□□ 0.13
PHRF1-202ENST00000413872 SERPINA12Q8IW75 414 aa15.88■□□□□ 0.13
PHRF1-202ENST00000413872 TTC9Q92623 222 aa15.88■□□□□ 0.13
PHRF1-202ENST00000413872 GHSRQ92847 366 aa15.88■□□□□ 0.13
PHRF1-202ENST00000413872 WDR37Q9Y2I8 494 aa15.88■□□□□ 0.13
PHRF1-202ENST00000413872 ZNF780AO75290 641 aaPredicted RBP15.88■□□□□ 0.13
PHRF1-202ENST00000413872 GFERP55789 205 aa15.88■□□□□ 0.13
PHRF1-202ENST00000413872 SMN1Q16637 294 aaKnown RBP15.88■□□□□ 0.13
PHRF1-202ENST00000413872 ZNF585AQ6P3V2 769 aa15.88■□□□□ 0.13
PHRF1-202ENST00000413872 Q6ZPB1 254 aaPredicted RBP15.88■□□□□ 0.13
PHRF1-202ENST00000413872 PRICKLE2Q7Z3G6 844 aa15.88■□□□□ 0.13
PHRF1-202ENST00000413872 PIWIL3Q7Z3Z3 882 aaKnown RBP15.88■□□□□ 0.13
PHRF1-202ENST00000413872 STEAP1Q9UHE8 339 aa15.88■□□□□ 0.13
PHRF1-202ENST00000413872 S100PP25815 95 aa15.88■□□□□ 0.13
PHRF1-202ENST00000413872 RPL23AP62750 156 aaKnown RBP15.88■□□□□ 0.13
PHRF1-202ENST00000413872 CARFQ8N187 725 aa15.88■□□□□ 0.13
PHRF1-202ENST00000413872 MYO10Q9HD67 2058 aa15.88■□□□□ 0.13
PHRF1-202ENST00000413872 ZNF628Q5EBL2 1059 aa15.88■□□□□ 0.13
PHRF1-202ENST00000413872 ESPNLQ6ZVH7 1005 aa15.88■□□□□ 0.13
PHRF1-202ENST00000413872 SEMA4GQ9NTN9 838 aa15.88■□□□□ 0.13
PHRF1-202ENST00000413872 TRIM64BA6NI03 449 aa15.87■□□□□ 0.13
PHRF1-202ENST00000413872 LRRC30A6NM36 301 aa15.87■□□□□ 0.13
PHRF1-202ENST00000413872 PEX11BO96011 259 aa15.87■□□□□ 0.13
PHRF1-202ENST00000413872 SELEP16581 610 aa15.87■□□□□ 0.13
PHRF1-202ENST00000413872 MMP11P24347 488 aa15.87■□□□□ 0.13
PHRF1-202ENST00000413872 TRIM23P36406 574 aa15.87■□□□□ 0.13
PHRF1-202ENST00000413872 CAMLGP49069 296 aa15.87■□□□□ 0.13
PHRF1-202ENST00000413872 NOVA1P51513 510 aaKnown RBP15.87■□□□□ 0.13
PHRF1-202ENST00000413872 MEP1BQ16820 701 aa15.87■□□□□ 0.13
PHRF1-202ENST00000413872 GLB1L2Q8IW92 636 aa15.87■□□□□ 0.13
PHRF1-202ENST00000413872 C2orf72A6NCS6 295 aa15.87■□□□□ 0.13
PHRF1-202ENST00000413872 IL2RAP01589 272 aa15.87■□□□□ 0.13
PHRF1-202ENST00000413872 S100A7P31151 101 aa15.87■□□□□ 0.13
PHRF1-202ENST00000413872 TP53I13Q8NBR0 393 aaPredicted RBP15.87■□□□□ 0.13
PHRF1-202ENST00000413872 MRPS28Q9Y2Q9 187 aaKnown RBP15.87■□□□□ 0.13
PHRF1-202ENST00000413872 FRG2CA6NGY1 282 aa15.87■□□□□ 0.13
PHRF1-202ENST00000413872 HPGDSO60760 199 aa15.87■□□□□ 0.13
PHRF1-202ENST00000413872 DPM1O60762 260 aa15.87■□□□□ 0.13
PHRF1-202ENST00000413872 CPT2P23786 658 aa15.87■□□□□ 0.13
PHRF1-202ENST00000413872 MAP2K6P52564 334 aa15.87■□□□□ 0.13
PHRF1-202ENST00000413872 SUMO3P55854 103 aaPredicted RBP15.87■□□□□ 0.13
PHRF1-202ENST00000413872 ZMAT1Q5H9K5 638 aa15.87■□□□□ 0.13
PHRF1-202ENST00000413872 OR4M1Q8NGD0 313 aa15.87■□□□□ 0.13
PHRF1-202ENST00000413872 FKRPQ9H9S5 495 aa15.87■□□□□ 0.13
PHRF1-202ENST00000413872 FIGNL2A6NMB9 653 aa15.87■□□□□ 0.13
PHRF1-202ENST00000413872 C4orf47A7E2U8 309 aa15.87■□□□□ 0.13
PHRF1-202ENST00000413872 EPHA1P21709 976 aa15.87■□□□□ 0.13
PHRF1-202ENST00000413872 EVI2BP34910 448 aa15.87■□□□□ 0.13
PHRF1-202ENST00000413872 KDM4DQ6B0I6 523 aa15.87■□□□□ 0.13
PHRF1-202ENST00000413872 FCRLAQ7L513 359 aa15.87■□□□□ 0.13
PHRF1-202ENST00000413872 LILRA2Q8N149 483 aa15.87■□□□□ 0.13
PHRF1-202ENST00000413872 OR4N2Q8NGD1 307 aa15.87■□□□□ 0.13
PHRF1-202ENST00000413872 C16orf52Q8NHV5 167 aa15.87■□□□□ 0.13
PHRF1-202ENST00000413872 RHOXF1Q8NHV9 184 aa15.87■□□□□ 0.13
PHRF1-202ENST00000413872 BOD1Q96IK1 185 aa15.87■□□□□ 0.13
PHRF1-202ENST00000413872 LSM5Q9Y4Y9 91 aaKnown RBP15.87■□□□□ 0.13
PHRF1-202ENST00000413872 PCDHGA1Q9Y5H4 931 aa15.87■□□□□ 0.13
PHRF1-202ENST00000413872 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.86■□□□□ 0.13
PHRF1-202ENST00000413872 NKX6-3A6NJ46 265 aa15.86■□□□□ 0.13
PHRF1-202ENST00000413872 AKR7A3O95154 331 aa15.86■□□□□ 0.13
PHRF1-202ENST00000413872 ZNF616Q08AN1 781 aa15.86■□□□□ 0.13
PHRF1-202ENST00000413872 IKZF1Q13422 519 aa15.86■□□□□ 0.13
PHRF1-202ENST00000413872 OR2T35Q8NGX2 323 aa15.86■□□□□ 0.13
PHRF1-202ENST00000413872 TSLPQ969D9 159 aa15.86■□□□□ 0.13
PHRF1-202ENST00000413872 MRGPRX4Q96LA9 322 aa15.86■□□□□ 0.13
PHRF1-202ENST00000413872 EGLN1Q9GZT9 426 aa15.86■□□□□ 0.13
PHRF1-202ENST00000413872 TRAPPC2LQ9UL33 140 aa15.86■□□□□ 0.13
PHRF1-202ENST00000413872 SNX11Q9Y5W9 270 aa15.86■□□□□ 0.13
PHRF1-202ENST00000413872 M0R082 166 aa15.86■□□□□ 0.13
PHRF1-202ENST00000413872 ARPC1BO15143 372 aaKnown RBP15.86■□□□□ 0.13
PHRF1-202ENST00000413872 IL13RA1P78552 427 aa15.86■□□□□ 0.13
PHRF1-202ENST00000413872 AGAP6Q5VW22 663 aa15.86■□□□□ 0.13
PHRF1-202ENST00000413872 FAM198BQ6UWH4 519 aa15.86■□□□□ 0.13
PHRF1-202ENST00000413872 PM20D2Q8IYS1 436 aa15.86■□□□□ 0.13
PHRF1-202ENST00000413872 CLDN22Q8N7P3 220 aa15.86■□□□□ 0.13
PHRF1-202ENST00000413872 UPRTQ96BW1 309 aa15.86■□□□□ 0.13
PHRF1-202ENST00000413872 MSI2Q96DH6 328 aaKnown RBP15.86■□□□□ 0.13
PHRF1-202ENST00000413872 Q96M85 177 aa15.86■□□□□ 0.13
PHRF1-202ENST00000413872 EIF5A2Q9GZV4 153 aaKnown RBP15.86■□□□□ 0.13
PHRF1-202ENST00000413872 LIN7BQ9HAP6 207 aa15.86■□□□□ 0.13
PHRF1-202ENST00000413872 DECR2Q9NUI1 292 aa15.86■□□□□ 0.13
PHRF1-202ENST00000413872 EHFQ9NZC4 300 aa15.86■□□□□ 0.13
PHRF1-202ENST00000413872 ETV7Q9Y603 341 aa15.86■□□□□ 0.13
PHRF1-202ENST00000413872 CDK5RAP2Q96SN8 1893 aa15.86■□□□□ 0.13
PHRF1-202ENST00000413872 ABCA3Q99758 1704 aa15.86■□□□□ 0.13
PHRF1-202ENST00000413872 A0A1W2PPH5 198 aa15.86■□□□□ 0.13
PHRF1-202ENST00000413872 C7orf72A4D263 438 aa15.86■□□□□ 0.13
PHRF1-202ENST00000413872 C5orf67F2Z3F1 127 aa15.86■□□□□ 0.13
PHRF1-202ENST00000413872 ARHGAP33O14559 1287 aa15.86■□□□□ 0.13
PHRF1-202ENST00000413872 PRAMEF4O60810 478 aa15.86■□□□□ 0.13
PHRF1-202ENST00000413872 HSF1Q00613 529 aa15.86■□□□□ 0.13
PHRF1-202ENST00000413872 DUSP7Q16829 419 aa15.86■□□□□ 0.13
PHRF1-202ENST00000413872 MEX3BQ6ZN04 569 aaKnown RBP15.86■□□□□ 0.13
PHRF1-202ENST00000413872 ACBD4Q8NC06 268 aa15.86■□□□□ 0.13
PHRF1-202ENST00000413872 RAB3CQ96E17 227 aa15.86■□□□□ 0.13
PHRF1-202ENST00000413872 NIPSNAP1Q9BPW8 284 aa15.86■□□□□ 0.13
PHRF1-202ENST00000413872 SULT4A1Q9BR01 284 aa15.86■□□□□ 0.13
PHRF1-202ENST00000413872 OR52A1Q9UKL2 312 aa15.86■□□□□ 0.13
PHRF1-202ENST00000413872 ACOD1A6NK06 481 aa15.86■□□□□ 0.13
PHRF1-202ENST00000413872 DOK2O60496 412 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms