RNA–Protein interactions for RNA: ENST00000413364.6

LITAF-203, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 2 BASIC

Gene LITAF, Length 2,292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-203ENST00000413364 GLCCI1Q86VQ1 547 aa11.88□□□□□ -0.51
LITAF-203ENST00000413364 ZNF454Q8N9F8 522 aa11.88□□□□□ -0.51
LITAF-203ENST00000413364 AP3S1Q92572 193 aa11.88□□□□□ -0.51
LITAF-203ENST00000413364 MRPS24Q96EL2 167 aaKnown RBP11.88□□□□□ -0.51
LITAF-203ENST00000413364 PTCHD1Q96NR3 888 aa11.88□□□□□ -0.51
LITAF-203ENST00000413364 OR1F2PQ96R84 312 aa11.88□□□□□ -0.51
LITAF-203ENST00000413364 ZNF426Q9BUY5 554 aa11.88□□□□□ -0.51
LITAF-203ENST00000413364 ISYNA1Q9NPH2 558 aa11.88□□□□□ -0.51
LITAF-203ENST00000413364 MEPEQ9NQ76 525 aaPredicted RBP11.88□□□□□ -0.51
LITAF-203ENST00000413364 SEMA5BQ9P283 1151 aa11.88□□□□□ -0.51
LITAF-203ENST00000413364 C17orf105B2RV13 164 aa11.88□□□□□ -0.51
LITAF-203ENST00000413364 BHLHE40O14503 412 aa11.88□□□□□ -0.51
LITAF-203ENST00000413364 ATG12O94817 140 aa11.88□□□□□ -0.51
LITAF-203ENST00000413364 GIMD1P0DJR0 217 aa11.88□□□□□ -0.51
LITAF-203ENST00000413364 SPP1P10451 314 aa11.88□□□□□ -0.51
LITAF-203ENST00000413364 FOSL2P15408 326 aa11.88□□□□□ -0.51
LITAF-203ENST00000413364 GLB1P16278 677 aa11.88□□□□□ -0.51
LITAF-203ENST00000413364 CPEP16870 476 aa11.88□□□□□ -0.51
LITAF-203ENST00000413364 BMP7P18075 431 aa11.88□□□□□ -0.51
LITAF-203ENST00000413364 RAB4AP20338 218 aa11.88□□□□□ -0.51
LITAF-203ENST00000413364 LCN1P31025 176 aa11.88□□□□□ -0.51
LITAF-203ENST00000413364 ALKBH1Q13686 389 aaKnown RBP11.88□□□□□ -0.51
LITAF-203ENST00000413364 PPA1Q15181 289 aa11.88□□□□□ -0.51
LITAF-203ENST00000413364 B3GNTL1Q67FW5 361 aaPredicted RBP11.88□□□□□ -0.51
LITAF-203ENST00000413364 KANSL1Q7Z3B3 1105 aa11.88□□□□□ -0.51
LITAF-203ENST00000413364 LHFPL3Q86UP9 236 aa11.88□□□□□ -0.51
LITAF-203ENST00000413364 LSRQ86X29 649 aaPredicted RBP11.88□□□□□ -0.51
LITAF-203ENST00000413364 CPOQ8IVL8 374 aa11.88□□□□□ -0.51
LITAF-203ENST00000413364 SKA3Q8IX90 412 aa11.88□□□□□ -0.51
LITAF-203ENST00000413364 PDZD9Q8IXQ8 264 aa11.88□□□□□ -0.51
LITAF-203ENST00000413364 D2HGDHQ8N465 521 aa11.88□□□□□ -0.51
LITAF-203ENST00000413364 BBS1Q8NFJ9 593 aa11.88□□□□□ -0.51
LITAF-203ENST00000413364 OR13C2Q8NGS9 318 aa11.88□□□□□ -0.51
LITAF-203ENST00000413364 SCMH1Q96GD3 660 aa11.88□□□□□ -0.51
LITAF-203ENST00000413364 SFXN2Q96NB2 322 aa11.88□□□□□ -0.51
LITAF-203ENST00000413364 SSX3Q99909 188 aa11.88□□□□□ -0.51
LITAF-203ENST00000413364 TMEM43Q9BTV4 400 aa11.88□□□□□ -0.51
LITAF-203ENST00000413364 MIXL1Q9H2W2 232 aa11.88□□□□□ -0.51
LITAF-203ENST00000413364 EXOSC4Q9NPD3 245 aaKnown RBP11.88□□□□□ -0.51
LITAF-203ENST00000413364 HINT3Q9NQE9 182 aaKnown RBP11.88□□□□□ -0.51
LITAF-203ENST00000413364 SNTG1Q9NSN8 517 aa11.88□□□□□ -0.51
LITAF-203ENST00000413364 SLCO1C1Q9NYB5 712 aa11.88□□□□□ -0.51
LITAF-203ENST00000413364 PPIEQ9UNP9 301 aaKnown RBP11.88□□□□□ -0.51
LITAF-203ENST00000413364 SIGLEC7Q9Y286 467 aa11.88□□□□□ -0.51
LITAF-203ENST00000413364 EXOGQ9Y2C4 368 aaKnown RBP11.88□□□□□ -0.51
LITAF-203ENST00000413364 PCDH15Q96QU1 1955 aa11.87□□□□□ -0.51
LITAF-203ENST00000413364 MEIKINA0A087WXM9 373 aa11.87□□□□□ -0.51
LITAF-203ENST00000413364 UBE2CO00762 179 aa11.87□□□□□ -0.51
LITAF-203ENST00000413364 RBBP9O75884 186 aa11.87□□□□□ -0.51
LITAF-203ENST00000413364 LIMS3P0CW19 117 aa11.87□□□□□ -0.51
LITAF-203ENST00000413364 LIMS4P0CW20 117 aa11.87□□□□□ -0.51
LITAF-203ENST00000413364 CSF2RBP32927 897 aa11.87□□□□□ -0.51
LITAF-203ENST00000413364 OR1D4P47884 311 aa11.87□□□□□ -0.51
LITAF-203ENST00000413364 SLC3A1Q07837 685 aa11.87□□□□□ -0.51
LITAF-203ENST00000413364 LIPKQ5VXJ0 399 aa11.87□□□□□ -0.51
LITAF-203ENST00000413364 SMARCD3Q6STE5 483 aa11.87□□□□□ -0.51
LITAF-203ENST00000413364 CXXC5Q7LFL8 322 aaKnown RBP11.87□□□□□ -0.51
LITAF-203ENST00000413364 GID4Q8IVV7 300 aa11.87□□□□□ -0.51
LITAF-203ENST00000413364 ATP6V1C2Q8NEY4 427 aa11.87□□□□□ -0.51
LITAF-203ENST00000413364 OR1L3Q8NH93 324 aa11.87□□□□□ -0.51
LITAF-203ENST00000413364 PTPMT1Q8WUK0 201 aaPredicted RBP11.87□□□□□ -0.51
LITAF-203ENST00000413364 SLC25A46Q96AG3 418 aa11.87□□□□□ -0.51
LITAF-203ENST00000413364 SENP5Q96HI0 755 aaPredicted RBP11.87□□□□□ -0.51
LITAF-203ENST00000413364 SLC41A2Q96JW4 573 aa11.87□□□□□ -0.51
LITAF-203ENST00000413364 ENKD1Q9H0I2 346 aa11.87□□□□□ -0.51
LITAF-203ENST00000413364 H2AFY2Q9P0M6 372 aaPredicted RBP11.87□□□□□ -0.51
LITAF-203ENST00000413364 SIT1Q9Y3P8 196 aa11.87□□□□□ -0.51
LITAF-203ENST00000413364 IGKV3D-11A0A0A0MRZ8 115 aa11.86□□□□□ -0.51
LITAF-203ENST00000413364 TCRBV16S1A1N1A0A5B0 115 aa11.86□□□□□ -0.51
LITAF-203ENST00000413364 SERINC4A6NH21 518 aa11.86□□□□□ -0.51
LITAF-203ENST00000413364 IL1AP01583 271 aa11.86□□□□□ -0.51
LITAF-203ENST00000413364 SAGP10523 405 aaPredicted RBP11.86□□□□□ -0.51
LITAF-203ENST00000413364 SDC2P34741 201 aa11.86□□□□□ -0.51
LITAF-203ENST00000413364 SLC1A3P43003 542 aa11.86□□□□□ -0.51
LITAF-203ENST00000413364 RAB5BP61020 215 aa11.86□□□□□ -0.51
LITAF-203ENST00000413364 MC2RQ01718 297 aa11.86□□□□□ -0.51
LITAF-203ENST00000413364 COTL1Q14019 142 aa11.86□□□□□ -0.51
LITAF-203ENST00000413364 ALG10BQ5I7T1 473 aa11.86□□□□□ -0.51
LITAF-203ENST00000413364 OR2G6Q5TZ20 316 aa11.86□□□□□ -0.51
LITAF-203ENST00000413364 ULK3Q6PHR2 472 aa11.86□□□□□ -0.51
LITAF-203ENST00000413364 NAXDQ8IW45 347 aa11.86□□□□□ -0.51
LITAF-203ENST00000413364 ZSCAN1Q8NBB4 408 aa11.86□□□□□ -0.51
LITAF-203ENST00000413364 OR4C3Q8NH37 302 aa11.86□□□□□ -0.51
LITAF-203ENST00000413364 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.86□□□□□ -0.51
LITAF-203ENST00000413364 CMTM3Q96MX0 182 aa11.86□□□□□ -0.51
LITAF-203ENST00000413364 NEU1Q99519 415 aa11.86□□□□□ -0.51
LITAF-203ENST00000413364 CMSS1Q9BQ75 279 aaKnown RBP11.86□□□□□ -0.51
LITAF-203ENST00000413364 ACTR6Q9GZN1 396 aa11.86□□□□□ -0.51
LITAF-203ENST00000413364 SPIN1Q9Y657 262 aaPredicted RBP11.86□□□□□ -0.51
LITAF-203ENST00000413364 EML5Q05BV3 1969 aa11.86□□□□□ -0.51
LITAF-203ENST00000413364 TEX13CA0A0J9YWL9 993 aa11.86□□□□□ -0.51
LITAF-203ENST00000413364 SOCS6O14544 535 aa11.86□□□□□ -0.51
LITAF-203ENST00000413364 KDM4BO94953 1096 aa11.86□□□□□ -0.51
LITAF-203ENST00000413364 CSTAP01040 98 aa11.86□□□□□ -0.51
LITAF-203ENST00000413364 IGHA1P01876 353 aa11.86□□□□□ -0.51
LITAF-203ENST00000413364 FOLR1P15328 257 aa11.86□□□□□ -0.51
LITAF-203ENST00000413364 SLC6A1P30531 599 aa11.86□□□□□ -0.51
LITAF-203ENST00000413364 SLC37A1P57057 533 aa11.86□□□□□ -0.51
LITAF-203ENST00000413364 PPP3R1P63098 170 aa11.86□□□□□ -0.51
LITAF-203ENST00000413364 ECH1Q13011 328 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms