RNA–Protein interactions for RNA: ENST00000411973.3

TRAPPC12-203, Transcript of trafficking protein particle complex 12, humanhuman

TSL 5

Gene TRAPPC12, Length 838 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-203ENST00000411973 CENPBD1B2RD01 187 aa13.59□□□□□ -0.23
TRAPPC12-203ENST00000411973 UPK3AO75631 287 aa13.59□□□□□ -0.23
TRAPPC12-203ENST00000411973 LYZL6O75951 148 aa13.59□□□□□ -0.23
TRAPPC12-203ENST00000411973 KRT33AO76009 404 aa13.59□□□□□ -0.23
TRAPPC12-203ENST00000411973 CCNB2O95067 398 aa13.59□□□□□ -0.23
TRAPPC12-203ENST00000411973 NDUFB2O95178 105 aa13.59□□□□□ -0.23
TRAPPC12-203ENST00000411973 IGHMP01871 453 aa13.59□□□□□ -0.23
TRAPPC12-203ENST00000411973 ITGA5P08648 1049 aa13.59□□□□□ -0.23
TRAPPC12-203ENST00000411973 EPXP11678 715 aa13.59□□□□□ -0.23
TRAPPC12-203ENST00000411973 ZNF26P17031 533 aaPredicted RBP13.59□□□□□ -0.23
TRAPPC12-203ENST00000411973 IL32P24001 234 aa13.59□□□□□ -0.23
TRAPPC12-203ENST00000411973 DNAJA1P31689 397 aaKnown RBP13.59□□□□□ -0.23
TRAPPC12-203ENST00000411973 DAP3P51398 398 aaKnown RBP13.59□□□□□ -0.23
TRAPPC12-203ENST00000411973 BIDP55957 195 aa13.59□□□□□ -0.23
TRAPPC12-203ENST00000411973 TGFBR3Q03167 851 aa13.59□□□□□ -0.23
TRAPPC12-203ENST00000411973 LGALS3BPQ08380 585 aa13.59□□□□□ -0.23
TRAPPC12-203ENST00000411973 PPP1R8Q12972 351 aaKnown RBP13.59□□□□□ -0.23
TRAPPC12-203ENST00000411973 TSPAN31Q12999 210 aa13.59□□□□□ -0.23
TRAPPC12-203ENST00000411973 CAMK2DQ13557 499 aa13.59□□□□□ -0.23
TRAPPC12-203ENST00000411973 ACKR1Q16570 336 aa13.59□□□□□ -0.23
TRAPPC12-203ENST00000411973 ARMC4Q5T2S8 1044 aa13.59□□□□□ -0.23
TRAPPC12-203ENST00000411973 ZNF787Q6DD87 383 aa13.59□□□□□ -0.23
TRAPPC12-203ENST00000411973 LINGO2Q7L985 606 aa13.59□□□□□ -0.23
TRAPPC12-203ENST00000411973 HDDC2Q7Z4H3 204 aa13.59□□□□□ -0.23
TRAPPC12-203ENST00000411973 C1orf162Q8NEQ5 155 aaPredicted RBP13.59□□□□□ -0.23
TRAPPC12-203ENST00000411973 GNPDA2Q8TDQ7 276 aa13.59□□□□□ -0.23
TRAPPC12-203ENST00000411973 ASB10Q8WXI3 467 aa13.59□□□□□ -0.23
TRAPPC12-203ENST00000411973 SLC25A44Q96H78 314 aaPredicted RBP13.59□□□□□ -0.23
TRAPPC12-203ENST00000411973 MUS81Q96NY9 551 aa13.59□□□□□ -0.23
TRAPPC12-203ENST00000411973 WFIKKN1Q96NZ8 548 aa13.59□□□□□ -0.23
TRAPPC12-203ENST00000411973 RAB3IPQ96QF0 476 aaPredicted RBP13.59□□□□□ -0.23
TRAPPC12-203ENST00000411973 GPX7Q96SL4 187 aaPredicted RBP13.59□□□□□ -0.23
TRAPPC12-203ENST00000411973 NDEL1Q9GZM8 345 aa13.59□□□□□ -0.23
TRAPPC12-203ENST00000411973 ACTR6Q9GZN1 396 aa13.59□□□□□ -0.23
TRAPPC12-203ENST00000411973 STX18Q9P2W9 335 aaKnown RBP13.59□□□□□ -0.23
TRAPPC12-203ENST00000411973 AP4S1Q9Y587 144 aa13.59□□□□□ -0.23
TRAPPC12-203ENST00000411973 ABCA12Q86UK0 2595 aa13.59□□□□□ -0.23
TRAPPC12-203ENST00000411973 ARRDC5A6NEK1 342 aa13.58□□□□□ -0.24
TRAPPC12-203ENST00000411973 ZNF587BE7ETH6 402 aa13.58□□□□□ -0.24
TRAPPC12-203ENST00000411973 GNGT2O14610 69 aa13.58□□□□□ -0.24
TRAPPC12-203ENST00000411973 DEAF1O75398 565 aaPredicted RBP13.58□□□□□ -0.24
TRAPPC12-203ENST00000411973 PGA4P0DJD7 388 aa13.58□□□□□ -0.24
TRAPPC12-203ENST00000411973 PGA3P0DJD8 388 aa13.58□□□□□ -0.24
TRAPPC12-203ENST00000411973 FOXG1P55316 489 aaPredicted RBP13.58□□□□□ -0.24
TRAPPC12-203ENST00000411973 FXYD6P3P58550 94 aa13.58□□□□□ -0.24
TRAPPC12-203ENST00000411973 CTXN1P60606 82 aa13.58□□□□□ -0.24
TRAPPC12-203ENST00000411973 RPL27P61353 136 aaKnown RBP13.58□□□□□ -0.24
TRAPPC12-203ENST00000411973 DAZAP2Q15038 168 aaPredicted RBP13.58□□□□□ -0.24
TRAPPC12-203ENST00000411973 TSC22D1Q15714 1073 aa13.58□□□□□ -0.24
TRAPPC12-203ENST00000411973 STK11Q15831 433 aa13.58□□□□□ -0.24
TRAPPC12-203ENST00000411973 ZSCAN26Q16670 478 aa13.58□□□□□ -0.24
TRAPPC12-203ENST00000411973 HIST3H3Q16695 136 aa13.58□□□□□ -0.24
TRAPPC12-203ENST00000411973 ANKRD34AQ69YU3 496 aa13.58□□□□□ -0.24
TRAPPC12-203ENST00000411973 OR7E24Q6IFN5 339 aa13.58□□□□□ -0.24
TRAPPC12-203ENST00000411973 C22orf34Q6ZV56 151 aa13.58□□□□□ -0.24
TRAPPC12-203ENST00000411973 SSX8Q7RTT4 187 aa13.58□□□□□ -0.24
TRAPPC12-203ENST00000411973 P2RY8Q86VZ1 359 aa13.58□□□□□ -0.24
TRAPPC12-203ENST00000411973 ZNF295-AS1Q8N0V1 137 aa13.58□□□□□ -0.24
TRAPPC12-203ENST00000411973 GPR137CQ8N3F9 429 aa13.58□□□□□ -0.24
TRAPPC12-203ENST00000411973 OR9Q2Q8NGE9 314 aa13.58□□□□□ -0.24
TRAPPC12-203ENST00000411973 TMEM54Q969K7 222 aa13.58□□□□□ -0.24
TRAPPC12-203ENST00000411973 ZNF566Q969W8 418 aa13.58□□□□□ -0.24
TRAPPC12-203ENST00000411973 MARVELD3Q96A59 401 aa13.58□□□□□ -0.24
TRAPPC12-203ENST00000411973 S100PBPQ96BU1 408 aa13.58□□□□□ -0.24
TRAPPC12-203ENST00000411973 ALKBH3Q96Q83 286 aaPredicted RBP13.58□□□□□ -0.24
TRAPPC12-203ENST00000411973 MED18Q9BUE0 208 aa13.58□□□□□ -0.24
TRAPPC12-203ENST00000411973 DGCR6LQ9BY27 220 aa13.58□□□□□ -0.24
TRAPPC12-203ENST00000411973 MRPL13Q9BYD1 178 aaKnown RBP13.58□□□□□ -0.24
TRAPPC12-203ENST00000411973 ITPR2Q14571 2701 aa13.58□□□□□ -0.24
TRAPPC12-203ENST00000411973 CACNA1DQ01668 2161 aa13.57□□□□□ -0.24
TRAPPC12-203ENST00000411973 CIB4A0PJX0 185 aa13.57□□□□□ -0.24
TRAPPC12-203ENST00000411973 OR5H1A6NKK0 313 aa13.57□□□□□ -0.24
TRAPPC12-203ENST00000411973 MCIDASD6RGH6 385 aa13.57□□□□□ -0.24
TRAPPC12-203ENST00000411973 TIPRLO75663 272 aa13.57□□□□□ -0.24
TRAPPC12-203ENST00000411973 GASTP01350 101 aa13.57□□□□□ -0.24
TRAPPC12-203ENST00000411973 IGHG1P01857 330 aa13.57□□□□□ -0.24
TRAPPC12-203ENST00000411973 THBDP07204 575 aa13.57□□□□□ -0.24
TRAPPC12-203ENST00000411973 CD14P08571 375 aa13.57□□□□□ -0.24
TRAPPC12-203ENST00000411973 CSNK1A1P48729 337 aa13.57□□□□□ -0.24
TRAPPC12-203ENST00000411973 ROR2Q01974 943 aaKnown RBP13.57□□□□□ -0.24
TRAPPC12-203ENST00000411973 MELKQ14680 651 aa13.57□□□□□ -0.24
TRAPPC12-203ENST00000411973 GABRA6Q16445 453 aa13.57□□□□□ -0.24
TRAPPC12-203ENST00000411973 TIMM23BQ5SRD1 257 aa13.57□□□□□ -0.24
TRAPPC12-203ENST00000411973 PHYHD1Q5SRE7 291 aa13.57□□□□□ -0.24
TRAPPC12-203ENST00000411973 C1QTNF12Q5T7M4 302 aa13.57□□□□□ -0.24
TRAPPC12-203ENST00000411973 CARD17Q5XLA6 110 aa13.57□□□□□ -0.24
TRAPPC12-203ENST00000411973 FAM205BPQ63HN1 556 aa13.57□□□□□ -0.24
TRAPPC12-203ENST00000411973 HMBOX1Q6NT76 420 aa13.57□□□□□ -0.24
TRAPPC12-203ENST00000411973 SMARCD3Q6STE5 483 aa13.57□□□□□ -0.24
TRAPPC12-203ENST00000411973 THSD4Q6ZMP0 1018 aa13.57□□□□□ -0.24
TRAPPC12-203ENST00000411973 TMEM179BQ7Z7N9 219 aa13.57□□□□□ -0.24
TRAPPC12-203ENST00000411973 AQP11Q8NBQ7 271 aa13.57□□□□□ -0.24
TRAPPC12-203ENST00000411973 OR6N1Q8NGY5 312 aa13.57□□□□□ -0.24
TRAPPC12-203ENST00000411973 GIPC3Q8TF64 312 aa13.57□□□□□ -0.24
TRAPPC12-203ENST00000411973 HSD17B8Q92506 261 aa13.57□□□□□ -0.24
TRAPPC12-203ENST00000411973 C14orf79Q96F83 325 aa13.57□□□□□ -0.24
TRAPPC12-203ENST00000411973 NTN4Q9HB63 628 aa13.57□□□□□ -0.24
TRAPPC12-203ENST00000411973 CRLF2Q9HC73 371 aa13.57□□□□□ -0.24
TRAPPC12-203ENST00000411973 GPR35Q9HC97 309 aa13.57□□□□□ -0.24
TRAPPC12-203ENST00000411973 B3GAT2Q9NPZ5 323 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms