RNA–Protein interactions for RNA: ENST00000411220.1

RNU4-88P-201, Transcript of RNA, U4 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU4-88P, Length 86 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-88P-201ENST00000411220 TERF2Q15554 542 aa-2.1□□□□□ -2.75
RNU4-88P-201ENST00000411220 SLC25A53Q5H9E4 307 aa-2.1□□□□□ -2.75
RNU4-88P-201ENST00000411220 NAA35Q5VZE5 725 aa-2.1□□□□□ -2.75
RNU4-88P-201ENST00000411220 CDC73Q6P1J9 531 aa-2.1□□□□□ -2.75
RNU4-88P-201ENST00000411220 KLHL17Q6TDP4 642 aa-2.1□□□□□ -2.75
RNU4-88P-201ENST00000411220 MBOAT1Q6ZNC8 495 aa-2.1□□□□□ -2.75
RNU4-88P-201ENST00000411220 FOXI2Q6ZQN5 318 aa-2.1□□□□□ -2.75
RNU4-88P-201ENST00000411220 RGS9BPQ6ZS82 235 aa-2.1□□□□□ -2.75
RNU4-88P-201ENST00000411220 MOGAT3Q86VF5 341 aa-2.1□□□□□ -2.75
RNU4-88P-201ENST00000411220 ANKRD18AQ8IVF6 992 aa-2.1□□□□□ -2.75
RNU4-88P-201ENST00000411220 FAM58AQ8N1B3 248 aa-2.1□□□□□ -2.75
RNU4-88P-201ENST00000411220 FBXW8Q8N3Y1 598 aa-2.1□□□□□ -2.75
RNU4-88P-201ENST00000411220 RPP25LQ8N5L8 163 aaKnown RBP-2.1□□□□□ -2.75
RNU4-88P-201ENST00000411220 TMEM252Q8N6L7 170 aa-2.1□□□□□ -2.75
RNU4-88P-201ENST00000411220 C11orf44Q8N8P7 122 aa-2.1□□□□□ -2.75
RNU4-88P-201ENST00000411220 MRPL43Q8N983 215 aaKnown RBP-2.1□□□□□ -2.75
RNU4-88P-201ENST00000411220 BBOF1Q8ND07 529 aa-2.1□□□□□ -2.75
RNU4-88P-201ENST00000411220 LPCAT1Q8NF37 534 aa-2.1□□□□□ -2.75
RNU4-88P-201ENST00000411220 DEFB105AQ8NG35 78 aa-2.1□□□□□ -2.75
RNU4-88P-201ENST00000411220 ZFAND1Q8TCF1 268 aa-2.1□□□□□ -2.75
RNU4-88P-201ENST00000411220 PAQR8Q8TEZ7 354 aa-2.1□□□□□ -2.75
RNU4-88P-201ENST00000411220 DEPDC1BQ8WUY9 529 aa-2.1□□□□□ -2.75
RNU4-88P-201ENST00000411220 SMPDL3BQ92485 455 aa-2.1□□□□□ -2.75
RNU4-88P-201ENST00000411220 FGF14Q92915 247 aa-2.1□□□□□ -2.75
RNU4-88P-201ENST00000411220 SNX21Q969T3 373 aa-2.1□□□□□ -2.75
RNU4-88P-201ENST00000411220 OTULINQ96BN8 352 aa-2.1□□□□□ -2.75
RNU4-88P-201ENST00000411220 COA7Q96BR5 231 aa-2.1□□□□□ -2.75
RNU4-88P-201ENST00000411220 FGGYQ96C11 551 aa-2.1□□□□□ -2.75
RNU4-88P-201ENST00000411220 DGCR14Q96DF8 476 aaKnown RBP-2.1□□□□□ -2.75
RNU4-88P-201ENST00000411220 RNF170Q96K19 258 aa-2.1□□□□□ -2.75
RNU4-88P-201ENST00000411220 PPP1R36Q96LQ0 422 aa-2.1□□□□□ -2.75
RNU4-88P-201ENST00000411220 TGM7Q96PF1 710 aa-2.1□□□□□ -2.75
RNU4-88P-201ENST00000411220 SDF2Q99470 211 aa-2.1□□□□□ -2.75
RNU4-88P-201ENST00000411220 CGRRF1Q99675 332 aa-2.1□□□□□ -2.75
RNU4-88P-201ENST00000411220 LPAR4Q99677 370 aa-2.1□□□□□ -2.75
RNU4-88P-201ENST00000411220 FUZQ9BT04 418 aa-2.1□□□□□ -2.75
RNU4-88P-201ENST00000411220 HAUS8Q9BT25 410 aa-2.1□□□□□ -2.75
RNU4-88P-201ENST00000411220 BCL2L14Q9BZR8 327 aa-2.1□□□□□ -2.75
RNU4-88P-201ENST00000411220 ABCG4Q9H172 646 aa-2.1□□□□□ -2.75
RNU4-88P-201ENST00000411220 TMEM60Q9H2L4 133 aa-2.1□□□□□ -2.75
RNU4-88P-201ENST00000411220 HES4Q9HCC6 221 aa-2.1□□□□□ -2.75
RNU4-88P-201ENST00000411220 MAN1C1Q9NR34 630 aa-2.1□□□□□ -2.75
RNU4-88P-201ENST00000411220 PAQR5Q9NXK6 330 aaPredicted RBP-2.1□□□□□ -2.75
RNU4-88P-201ENST00000411220 ADD3Q9UEY8 706 aaKnown RBP-2.1□□□□□ -2.75
RNU4-88P-201ENST00000411220 FBXO9Q9UK97 447 aaPredicted RBP-2.1□□□□□ -2.75
RNU4-88P-201ENST00000411220 NDRG2Q9UN36 371 aaKnown RBP-2.1□□□□□ -2.75
RNU4-88P-201ENST00000411220 FARSAQ9Y285 508 aaKnown RBP-2.1□□□□□ -2.75
RNU4-88P-201ENST00000411220 PCDHB2Q9Y5E7 798 aa-2.1□□□□□ -2.75
RNU4-88P-201ENST00000411220 PCDHGA7Q9Y5G6 932 aa-2.1□□□□□ -2.75
RNU4-88P-201ENST00000411220 SBF2Q86WG5 1849 aa-2.1□□□□□ -2.75
RNU4-88P-201ENST00000411220 MYLKQ15746 1914 aa-2.11□□□□□ -2.75
RNU4-88P-201ENST00000411220 AFF2P51816 1311 aa-2.11□□□□□ -2.75
RNU4-88P-201ENST00000411220 MROH7Q68CQ1 1323 aa-2.11□□□□□ -2.75
RNU4-88P-201ENST00000411220 SYNRGQ9UMZ2 1314 aa-2.11□□□□□ -2.75
RNU4-88P-201ENST00000411220 WDR7Q9Y4E6 1490 aa-2.11□□□□□ -2.75
RNU4-88P-201ENST00000411220 IGHV1-3A0A0C4DH29 117 aa-2.11□□□□□ -2.75
RNU4-88P-201ENST00000411220 FAM230AA0A1W2PPH8 454 aa-2.11□□□□□ -2.75
RNU4-88P-201ENST00000411220 CCDC162PA2VCL2 907 aa-2.11□□□□□ -2.75
RNU4-88P-201ENST00000411220 HELTA6NFD8 242 aa-2.11□□□□□ -2.75
RNU4-88P-201ENST00000411220 IFITM5A6NNB3 132 aa-2.11□□□□□ -2.75
RNU4-88P-201ENST00000411220 YJEFN3A6XGL0 299 aa-2.11□□□□□ -2.75
RNU4-88P-201ENST00000411220 ZNF727A8MUV8 499 aa-2.11□□□□□ -2.75
RNU4-88P-201ENST00000411220 IDSB3KWA1 339 aa-2.11□□□□□ -2.75
RNU4-88P-201ENST00000411220 NPIPA5E9PKD4 350 aa-2.11□□□□□ -2.75
RNU4-88P-201ENST00000411220 TLR4O00206 839 aa-2.11□□□□□ -2.75
RNU4-88P-201ENST00000411220 PEX12O00623 359 aa-2.11□□□□□ -2.75
RNU4-88P-201ENST00000411220 IFIT3O14879 490 aaKnown RBP-2.11□□□□□ -2.75
RNU4-88P-201ENST00000411220 SIGLEC5O15389 551 aa-2.11□□□□□ -2.75
RNU4-88P-201ENST00000411220 SLC31A2O15432 143 aa-2.11□□□□□ -2.75
RNU4-88P-201ENST00000411220 PSMD3O43242 534 aa-2.11□□□□□ -2.75
RNU4-88P-201ENST00000411220 SGTAO43765 313 aa-2.11□□□□□ -2.75
RNU4-88P-201ENST00000411220 DNAL4O96015 105 aa-2.11□□□□□ -2.75
RNU4-88P-201ENST00000411220 ALDOBP05062 364 aa-2.11□□□□□ -2.75
RNU4-88P-201ENST00000411220 RPLP0P05388 317 aaKnown RBP-2.11□□□□□ -2.75
RNU4-88P-201ENST00000411220 MYBL2P10244 700 aa-2.11□□□□□ -2.75
RNU4-88P-201ENST00000411220 MYCLP1P12525 358 aaPredicted RBP-2.11□□□□□ -2.75
RNU4-88P-201ENST00000411220 MTHFD2P13995 350 aa-2.11□□□□□ -2.75
RNU4-88P-201ENST00000411220 IDSP22304 550 aa-2.11□□□□□ -2.75
RNU4-88P-201ENST00000411220 OMGP23515 440 aa-2.11□□□□□ -2.75
RNU4-88P-201ENST00000411220 ACKR3P25106 362 aa-2.11□□□□□ -2.75
RNU4-88P-201ENST00000411220 PSMB9P28065 219 aa-2.11□□□□□ -2.75
RNU4-88P-201ENST00000411220 CNGA1P29973 690 aa-2.11□□□□□ -2.75
RNU4-88P-201ENST00000411220 NMT1P30419 496 aaKnown RBP-2.11□□□□□ -2.75
RNU4-88P-201ENST00000411220 ADSSP30520 456 aa-2.11□□□□□ -2.75
RNU4-88P-201ENST00000411220 RPL9P32969 192 aaKnown RBP-2.11□□□□□ -2.75
RNU4-88P-201ENST00000411220 NASPP49321 788 aaPredicted RBP-2.11□□□□□ -2.75
RNU4-88P-201ENST00000411220 IDH3GP51553 393 aaPredicted RBP-2.11□□□□□ -2.75
RNU4-88P-201ENST00000411220 GUCY2FP51841 1108 aa-2.11□□□□□ -2.75
RNU4-88P-201ENST00000411220 METAP1P53582 386 aa-2.11□□□□□ -2.75
RNU4-88P-201ENST00000411220 ATP1B3P54709 279 aa-2.11□□□□□ -2.75
RNU4-88P-201ENST00000411220 EVCP57679 992 aa-2.11□□□□□ -2.75
RNU4-88P-201ENST00000411220 ACTR3P61158 418 aa-2.11□□□□□ -2.75
RNU4-88P-201ENST00000411220 RPS15AP62244 130 aaKnown RBP-2.11□□□□□ -2.75
RNU4-88P-201ENST00000411220 GSTO1P78417 241 aa-2.11□□□□□ -2.75
RNU4-88P-201ENST00000411220 RHAGQ02094 409 aa-2.11□□□□□ -2.75
RNU4-88P-201ENST00000411220 SIGLEC14Q08ET2 396 aa-2.11□□□□□ -2.75
RNU4-88P-201ENST00000411220 VEPH1Q14D04 833 aa-2.11□□□□□ -2.75
RNU4-88P-201ENST00000411220 MPV17LQ2QL34 196 aa-2.11□□□□□ -2.75
RNU4-88P-201ENST00000411220 C5orf22Q49AR2 442 aa-2.11□□□□□ -2.75
RNU4-88P-201ENST00000411220 SMUG1Q53HV7 270 aa-2.11□□□□□ -2.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms