RNA–Protein interactions for RNA: ENST00000400337.6

COL18A1-204, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL18A1, Length 5,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-204ENST00000400337 ZMAT1Q5H9K5 638 aa16.73■□□□□ 0.27
COL18A1-204ENST00000400337 TMEM196Q5HYL7 178 aa16.73■□□□□ 0.27
COL18A1-204ENST00000400337 DHRS4L2Q6PKH6 230 aa16.73■□□□□ 0.27
COL18A1-204ENST00000400337 LANCL3Q6ZV70 420 aa16.73■□□□□ 0.27
COL18A1-204ENST00000400337 ARSGQ96EG1 525 aa16.73■□□□□ 0.27
COL18A1-204ENST00000400337 MBOAT4Q96T53 435 aa16.73■□□□□ 0.27
COL18A1-204ENST00000400337 TMEM82A0PJX8 343 aa16.73■□□□□ 0.27
COL18A1-204ENST00000400337 LINC01565O15544 149 aa16.73■□□□□ 0.27
COL18A1-204ENST00000400337 PLRG1O43660 514 aaKnown RBP16.73■□□□□ 0.27
COL18A1-204ENST00000400337 JUNBP17275 347 aaPredicted RBP16.73■□□□□ 0.27
COL18A1-204ENST00000400337 PSMB1P20618 241 aaKnown RBP16.73■□□□□ 0.27
COL18A1-204ENST00000400337 IL2RGP31785 369 aa16.73■□□□□ 0.27
COL18A1-204ENST00000400337 BSGP35613 385 aa16.73■□□□□ 0.27
COL18A1-204ENST00000400337 RRADP55042 308 aa16.73■□□□□ 0.27
COL18A1-204ENST00000400337 SLC14A1Q13336 389 aa16.73■□□□□ 0.27
COL18A1-204ENST00000400337 POU4F3Q15319 338 aa16.73■□□□□ 0.27
COL18A1-204ENST00000400337 VWA2Q5GFL6 755 aa16.73■□□□□ 0.27
COL18A1-204ENST00000400337 BEX5Q5H9J7 111 aa16.73■□□□□ 0.27
COL18A1-204ENST00000400337 COMTD1Q86VU5 262 aa16.73■□□□□ 0.27
COL18A1-204ENST00000400337 MUCL1Q96DR8 90 aa16.73■□□□□ 0.27
COL18A1-204ENST00000400337 ZNF223Q9UK11 482 aaPredicted RBP16.73■□□□□ 0.27
COL18A1-204ENST00000400337 EIF4E2O60573 245 aaKnown RBP16.73■□□□□ 0.27
COL18A1-204ENST00000400337 PEX14O75381 377 aa16.73■□□□□ 0.27
COL18A1-204ENST00000400337 SCGB2A1O75556 95 aa16.73■□□□□ 0.27
COL18A1-204ENST00000400337 UBL3O95164 117 aa16.73■□□□□ 0.27
COL18A1-204ENST00000400337 PEX11BO96011 259 aa16.73■□□□□ 0.27
COL18A1-204ENST00000400337 C9orf50Q5SZB4 431 aa16.73■□□□□ 0.27
COL18A1-204ENST00000400337 FER1L6-AS2Q96M78 137 aa16.73■□□□□ 0.27
COL18A1-204ENST00000400337 TEAD3Q99594 435 aa16.73■□□□□ 0.27
COL18A1-204ENST00000400337 METTL17Q9H7H0 456 aaPredicted RBP16.73■□□□□ 0.27
COL18A1-204ENST00000400337 GALNT9Q9HCQ5 603 aa16.73■□□□□ 0.27
COL18A1-204ENST00000400337 LRFN1Q9P244 771 aa16.73■□□□□ 0.27
COL18A1-204ENST00000400337 NPFFR2Q9Y5X5 522 aa16.73■□□□□ 0.27
COL18A1-204ENST00000400337 AKR7A3O95154 331 aa16.72■□□□□ 0.27
COL18A1-204ENST00000400337 TPT1P13693 172 aaKnown RBP16.72■□□□□ 0.27
COL18A1-204ENST00000400337 H1FNTQ75WM6 255 aaPredicted RBP16.72■□□□□ 0.27
COL18A1-204ENST00000400337 DCXRQ7Z4W1 244 aa16.72■□□□□ 0.27
COL18A1-204ENST00000400337 OR5M1Q8NGP8 315 aa16.72■□□□□ 0.27
COL18A1-204ENST00000400337 SELENOIQ9C0D9 397 aa16.72■□□□□ 0.27
COL18A1-204ENST00000400337 RBFOX1Q9NWB1 397 aaKnown RBP16.72■□□□□ 0.27
COL18A1-204ENST00000400337 MT-ATP6P00846 226 aa16.72■□□□□ 0.27
COL18A1-204ENST00000400337 GABRA2P47869 451 aa16.72■□□□□ 0.27
COL18A1-204ENST00000400337 SLC35D3Q5M8T2 416 aa16.72■□□□□ 0.27
COL18A1-204ENST00000400337 ANKRD34AQ69YU3 496 aa16.72■□□□□ 0.27
COL18A1-204ENST00000400337 OR56B2PQ8NGI1 322 aa16.72■□□□□ 0.27
COL18A1-204ENST00000400337 OR4D6Q8NGJ1 314 aa16.72■□□□□ 0.27
COL18A1-204ENST00000400337 FGGYQ96C11 551 aa16.72■□□□□ 0.27
COL18A1-204ENST00000400337 BET1O15155 118 aa16.72■□□□□ 0.27
COL18A1-204ENST00000400337 CEACAM5P06731 702 aa16.72■□□□□ 0.27
COL18A1-204ENST00000400337 THBS1P07996 1170 aa16.72■□□□□ 0.27
COL18A1-204ENST00000400337 LUMP51884 338 aaPredicted RBP16.72■□□□□ 0.27
COL18A1-204ENST00000400337 AGBL4Q5VU57 503 aa16.72■□□□□ 0.27
COL18A1-204ENST00000400337 VHLLQ6RSH7 139 aa16.72■□□□□ 0.27
COL18A1-204ENST00000400337 ZNF813Q6ZN06 617 aa16.72■□□□□ 0.27
COL18A1-204ENST00000400337 SLC43A2Q8N370 569 aa16.72■□□□□ 0.27
COL18A1-204ENST00000400337 TMEM185AQ8NFB2 350 aa16.72■□□□□ 0.27
COL18A1-204ENST00000400337 KCNG3Q8TAE7 436 aa16.72■□□□□ 0.27
COL18A1-204ENST00000400337 PDCD1LG2Q9BQ51 273 aa16.72■□□□□ 0.27
COL18A1-204ENST00000400337 CCDC163A0A0D9SF12 145 aa16.72■□□□□ 0.27
COL18A1-204ENST00000400337 TSPAN11A1L157 253 aa16.72■□□□□ 0.27
COL18A1-204ENST00000400337 SURF4O15260 269 aa16.72■□□□□ 0.27
COL18A1-204ENST00000400337 KCNK2O95069 426 aa16.72■□□□□ 0.27
COL18A1-204ENST00000400337 ABHD16AO95870 558 aa16.72■□□□□ 0.27
COL18A1-204ENST00000400337 RAB31Q13636 194 aa16.72■□□□□ 0.27
COL18A1-204ENST00000400337 CTU2Q2VPK5 515 aaKnown RBP16.72■□□□□ 0.27
COL18A1-204ENST00000400337 FBXW12Q6X9E4 464 aa16.72■□□□□ 0.27
COL18A1-204ENST00000400337 BCORP1Q8N888 145 aa16.72■□□□□ 0.27
COL18A1-204ENST00000400337 PKMYT1Q99640 499 aa16.72■□□□□ 0.27
COL18A1-204ENST00000400337 FOXQ1Q9C009 403 aa16.72■□□□□ 0.27
COL18A1-204ENST00000400337 COA3Q9Y2R0 106 aaPredicted RBP16.72■□□□□ 0.27
COL18A1-204ENST00000400337 ZC3H12DA2A288 527 aaKnown RBP16.71■□□□□ 0.27
COL18A1-204ENST00000400337 TRIM64BA6NI03 449 aa16.71■□□□□ 0.27
COL18A1-204ENST00000400337 HSPB6O14558 160 aa16.71■□□□□ 0.27
COL18A1-204ENST00000400337 BLVRBP30043 206 aaPredicted RBP16.71■□□□□ 0.27
COL18A1-204ENST00000400337 CYB561P49447 251 aa16.71■□□□□ 0.27
COL18A1-204ENST00000400337 ZNF546Q86UE3 836 aa16.71■□□□□ 0.27
COL18A1-204ENST00000400337 RPS19BP1Q86WX3 136 aaKnown RBP16.71■□□□□ 0.27
COL18A1-204ENST00000400337 NANOGP1Q8N7R0 232 aa16.71■□□□□ 0.27
COL18A1-204ENST00000400337 OR51D1Q8NGF3 324 aa16.71■□□□□ 0.27
COL18A1-204ENST00000400337 PPA2Q9H2U2 334 aa16.71■□□□□ 0.27
COL18A1-204ENST00000400337 SLAMF7Q9NQ25 335 aa16.71■□□□□ 0.27
COL18A1-204ENST00000400337 SMIM18P0DKX4 95 aa16.71■□□□□ 0.27
COL18A1-204ENST00000400337 CD22P20273 847 aa16.71■□□□□ 0.27
COL18A1-204ENST00000400337 P2RX1P51575 399 aa16.71■□□□□ 0.27
COL18A1-204ENST00000400337 SLC35A2P78381 396 aa16.71■□□□□ 0.27
COL18A1-204ENST00000400337 BTG2P78543 158 aa16.71■□□□□ 0.27
COL18A1-204ENST00000400337 SORDQ00796 357 aa16.71■□□□□ 0.27
COL18A1-204ENST00000400337 B4GALNT1Q00973 533 aa16.71■□□□□ 0.27
COL18A1-204ENST00000400337 EXT1Q16394 746 aa16.71■□□□□ 0.27
COL18A1-204ENST00000400337 ACSM5Q6NUN0 579 aa16.71■□□□□ 0.27
COL18A1-204ENST00000400337 KIAA0907Q7Z7F0 614 aaPredicted RBP16.71■□□□□ 0.27
COL18A1-204ENST00000400337 LIN7BQ9HAP6 207 aa16.71■□□□□ 0.27
COL18A1-204ENST00000400337 WASH6PQ9NQA3 447 aa16.71■□□□□ 0.27
COL18A1-204ENST00000400337 OR52A1Q9UKL2 312 aa16.71■□□□□ 0.27
COL18A1-204ENST00000400337 NSA2O95478 260 aaKnown RBP16.71■□□□□ 0.27
COL18A1-204ENST00000400337 RPL23AP62750 156 aaKnown RBP16.71■□□□□ 0.27
COL18A1-204ENST00000400337 IKZF1Q13422 519 aa16.71■□□□□ 0.27
COL18A1-204ENST00000400337 PLPP7Q8NBV4 271 aa16.71■□□□□ 0.27
COL18A1-204ENST00000400337 SAV1Q9H4B6 383 aaPredicted RBP16.71■□□□□ 0.27
COL18A1-204ENST00000400337 NDRG4Q9ULP0 352 aaKnown RBP16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms