RNA–Protein interactions for RNA: ENST00000397477.2

CPSF1P1-201, Transcript of cleavage and polyadenylation specific factor 1 pseudogene 1, humanhuman

BASIC

Gene CPSF1P1, Length 3,730 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1P1-201ENST00000397477 FARSAQ9Y285 508 aaKnown RBP9.49□□□□□ -0.89
CPSF1P1-201ENST00000397477 MTCH2Q9Y6C9 303 aa9.49□□□□□ -0.89
CPSF1P1-201ENST00000397477 FANCMQ8IYD8 2048 aa9.49□□□□□ -0.89
CPSF1P1-201ENST00000397477 METTL12A8MUP2 240 aa9.49□□□□□ -0.89
CPSF1P1-201ENST00000397477 NPIPA5E9PKD4 350 aa9.49□□□□□ -0.89
CPSF1P1-201ENST00000397477 G3V3Y1 287 aa9.49□□□□□ -0.89
CPSF1P1-201ENST00000397477 MPZL1O95297 269 aa9.49□□□□□ -0.89
CPSF1P1-201ENST00000397477 SFTPDP35247 375 aa9.49□□□□□ -0.89
CPSF1P1-201ENST00000397477 UBE2MP61081 183 aaKnown RBP9.49□□□□□ -0.89
CPSF1P1-201ENST00000397477 TAF13Q15543 124 aa9.49□□□□□ -0.89
CPSF1P1-201ENST00000397477 SYT13Q7L8C5 426 aa9.49□□□□□ -0.89
CPSF1P1-201ENST00000397477 TDHQ8IZJ6 230 aa9.49□□□□□ -0.89
CPSF1P1-201ENST00000397477 OR2T35Q8NGX2 323 aa9.49□□□□□ -0.89
CPSF1P1-201ENST00000397477 DVL3Q92997 716 aaPredicted RBP9.49□□□□□ -0.89
CPSF1P1-201ENST00000397477 PGLYRP3Q96LB9 341 aa9.49□□□□□ -0.89
CPSF1P1-201ENST00000397477 SEC22CQ9BRL7 303 aa9.49□□□□□ -0.89
CPSF1P1-201ENST00000397477 ATG5Q9H1Y0 275 aa9.49□□□□□ -0.89
CPSF1P1-201ENST00000397477 MMP25Q9NPA2 562 aa9.49□□□□□ -0.89
CPSF1P1-201ENST00000397477 PRDM9Q9NQV7 894 aa9.49□□□□□ -0.89
CPSF1P1-201ENST00000397477 NPIPA1Q9UND3 350 aa9.49□□□□□ -0.89
CPSF1P1-201ENST00000397477 MN1Q10571 1320 aaPredicted RBP9.49□□□□□ -0.89
CPSF1P1-201ENST00000397477 POU3F3P20264 500 aaPredicted RBP9.48□□□□□ -0.89
CPSF1P1-201ENST00000397477 ERP29P30040 261 aaKnown RBP9.48□□□□□ -0.89
CPSF1P1-201ENST00000397477 SPOCK1Q08629 439 aa9.48□□□□□ -0.89
CPSF1P1-201ENST00000397477 ACKR1Q16570 336 aa9.48□□□□□ -0.89
CPSF1P1-201ENST00000397477 ZNF782Q6ZMW2 699 aaPredicted RBP9.48□□□□□ -0.89
CPSF1P1-201ENST00000397477 MAMDC2Q7Z304 686 aaPredicted RBP9.48□□□□□ -0.89
CPSF1P1-201ENST00000397477 ZNF440Q8IYI8 595 aa9.48□□□□□ -0.89
CPSF1P1-201ENST00000397477 OR10H5Q8NGA6 315 aa9.48□□□□□ -0.89
CPSF1P1-201ENST00000397477 OR2I1PQ8NGU4 316 aa9.48□□□□□ -0.89
CPSF1P1-201ENST00000397477 ZNF417Q8TAU3 575 aa9.48□□□□□ -0.89
CPSF1P1-201ENST00000397477 FAM46BQ96A09 425 aa9.48□□□□□ -0.89
CPSF1P1-201ENST00000397477 RNF170Q96K19 258 aa9.48□□□□□ -0.89
CPSF1P1-201ENST00000397477 KLHL15Q96M94 604 aa9.48□□□□□ -0.89
CPSF1P1-201ENST00000397477 SLC46A1Q96NT5 459 aa9.48□□□□□ -0.89
CPSF1P1-201ENST00000397477 SNX18Q96RF0 628 aa9.48□□□□□ -0.89
CPSF1P1-201ENST00000397477 ZNF587Q96SQ5 575 aaPredicted RBP9.48□□□□□ -0.89
CPSF1P1-201ENST00000397477 CMKLR1Q99788 373 aa9.48□□□□□ -0.89
CPSF1P1-201ENST00000397477 MICU1Q9BPX6 476 aa9.48□□□□□ -0.89
CPSF1P1-201ENST00000397477 CLEC4MQ9H2X3 399 aaPredicted RBP9.48□□□□□ -0.89
CPSF1P1-201ENST00000397477 SLCO1C1Q9NYB5 712 aa9.48□□□□□ -0.89
CPSF1P1-201ENST00000397477 NOX1Q9Y5S8 564 aa9.48□□□□□ -0.89
CPSF1P1-201ENST00000397477 BCAT2O15382 392 aaPredicted RBP9.48□□□□□ -0.89
CPSF1P1-201ENST00000397477 KRT33AO76009 404 aa9.48□□□□□ -0.89
CPSF1P1-201ENST00000397477 PPICP45877 212 aa9.48□□□□□ -0.89
CPSF1P1-201ENST00000397477 PRKXP51817 358 aa9.48□□□□□ -0.89
CPSF1P1-201ENST00000397477 ART1P52961 327 aa9.48□□□□□ -0.89
CPSF1P1-201ENST00000397477 CLDN20P56880 219 aa9.48□□□□□ -0.89
CPSF1P1-201ENST00000397477 POU3F1Q03052 451 aaPredicted RBP9.48□□□□□ -0.89
CPSF1P1-201ENST00000397477 EIF2B1Q14232 305 aaKnown RBP9.48□□□□□ -0.89
CPSF1P1-201ENST00000397477 ZNF141Q15928 474 aa9.48□□□□□ -0.89
CPSF1P1-201ENST00000397477 SCGB2B2Q4G0G5 96 aa9.48□□□□□ -0.89
CPSF1P1-201ENST00000397477 OR10K2Q6IF99 312 aa9.48□□□□□ -0.89
CPSF1P1-201ENST00000397477 NUP54Q7Z3B4 507 aa9.48□□□□□ -0.89
CPSF1P1-201ENST00000397477 SLC35F3Q8IY50 421 aa9.48□□□□□ -0.89
CPSF1P1-201ENST00000397477 LILRB4Q8NHJ6 448 aa9.48□□□□□ -0.89
CPSF1P1-201ENST00000397477 ZNF775Q96BV0 537 aaPredicted RBP9.48□□□□□ -0.89
CPSF1P1-201ENST00000397477 MED29Q9NX70 200 aa9.48□□□□□ -0.89
CPSF1P1-201ENST00000397477 TMED7-TICAM2A0A0A6YYA0 188 aa9.48□□□□□ -0.89
CPSF1P1-201ENST00000397477 H0YIG0 161 aa9.48□□□□□ -0.89
CPSF1P1-201ENST00000397477 SLC43A1O75387 559 aa9.48□□□□□ -0.89
CPSF1P1-201ENST00000397477 TMIGD3P0DMS9 266 aaPredicted RBP9.48□□□□□ -0.89
CPSF1P1-201ENST00000397477 DNASE1P24855 282 aa9.48□□□□□ -0.89
CPSF1P1-201ENST00000397477 SDHAP31040 664 aa9.48□□□□□ -0.89
CPSF1P1-201ENST00000397477 SLC37A1P57057 533 aa9.48□□□□□ -0.89
CPSF1P1-201ENST00000397477 PRAMEF20Q5VT98 475 aa9.48□□□□□ -0.89
CPSF1P1-201ENST00000397477 LSMEM1Q8N8F7 131 aa9.48□□□□□ -0.89
CPSF1P1-201ENST00000397477 OR14A16Q8NHC5 309 aa9.48□□□□□ -0.89
CPSF1P1-201ENST00000397477 OR6C1Q96RD1 312 aa9.48□□□□□ -0.89
CPSF1P1-201ENST00000397477 ARPC5LQ9BPX5 153 aa9.48□□□□□ -0.89
CPSF1P1-201ENST00000397477 METTL7AQ9H8H3 244 aa9.48□□□□□ -0.89
CPSF1P1-201ENST00000397477 COQ3Q9NZJ6 369 aa9.48□□□□□ -0.89
CPSF1P1-201ENST00000397477 CGGBP1Q9UFW8 167 aaPredicted RBP9.48□□□□□ -0.89
CPSF1P1-201ENST00000397477 ST6GALNAC2Q9UJ37 374 aa9.48□□□□□ -0.89
CPSF1P1-201ENST00000397477 TMED7Q9Y3B3 224 aa9.48□□□□□ -0.89
CPSF1P1-201ENST00000397477 MEN1O00255 615 aa9.47□□□□□ -0.89
CPSF1P1-201ENST00000397477 UBL3O95164 117 aa9.47□□□□□ -0.89
CPSF1P1-201ENST00000397477 SRFP11831 508 aa9.47□□□□□ -0.89
CPSF1P1-201ENST00000397477 ANXA3P12429 323 aa9.47□□□□□ -0.89
CPSF1P1-201ENST00000397477 DCTDP32321 178 aa9.47□□□□□ -0.89
CPSF1P1-201ENST00000397477 BDH1Q02338 343 aa9.47□□□□□ -0.89
CPSF1P1-201ENST00000397477 LTBQ06643 244 aa9.47□□□□□ -0.89
CPSF1P1-201ENST00000397477 ALKBH1Q13686 389 aaKnown RBP9.47□□□□□ -0.89
CPSF1P1-201ENST00000397477 PCGF3Q3KNV8 242 aa9.47□□□□□ -0.89
CPSF1P1-201ENST00000397477 ZNF615Q8N8J6 731 aa9.47□□□□□ -0.89
CPSF1P1-201ENST00000397477 NAXEQ8NCW5 288 aa9.47□□□□□ -0.89
CPSF1P1-201ENST00000397477 TNFAIP8L1Q8WVP5 186 aa9.47□□□□□ -0.89
CPSF1P1-201ENST00000397477 TRIM63Q969Q1 353 aa9.47□□□□□ -0.89
CPSF1P1-201ENST00000397477 NXPE2Q96DL1 559 aa9.47□□□□□ -0.89
CPSF1P1-201ENST00000397477 TSPAN32Q96QS1 320 aa9.47□□□□□ -0.89
CPSF1P1-201ENST00000397477 TIMP4Q99727 224 aa9.47□□□□□ -0.89
CPSF1P1-201ENST00000397477 NPAP1Q9NZP6 1156 aa9.47□□□□□ -0.89
CPSF1P1-201ENST00000397477 RABL2BQ9UNT1 228 aa9.47□□□□□ -0.89
CPSF1P1-201ENST00000397477 COA3Q9Y2R0 106 aaPredicted RBP9.47□□□□□ -0.89
CPSF1P1-201ENST00000397477 A0A1W2PPL8 197 aa9.47□□□□□ -0.89
CPSF1P1-201ENST00000397477 IFITM5A6NNB3 132 aa9.47□□□□□ -0.89
CPSF1P1-201ENST00000397477 PRR32B1ATL7 298 aa9.47□□□□□ -0.89
CPSF1P1-201ENST00000397477 LMO7DNF2Z398 122 aa9.47□□□□□ -0.89
CPSF1P1-201ENST00000397477 TEX46H3BTG2 121 aa9.47□□□□□ -0.89
CPSF1P1-201ENST00000397477 GTF2F2P13984 249 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms