RNA–Protein interactions for RNA: ENST00000397442.5

CPNE1-203, Transcript of copine 1, humanhuman

TSL 5 BASIC

Gene CPNE1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-203ENST00000397442 NPIPA5E9PKD4 350 aa24.53■■□□□ 1.52
CPNE1-203ENST00000397442 H7C1C5 153 aa24.53■■□□□ 1.52
CPNE1-203ENST00000397442 ARHGEF9O43307 516 aa24.53■■□□□ 1.52
CPNE1-203ENST00000397442 BCL10O95999 233 aa24.53■■□□□ 1.52
CPNE1-203ENST00000397442 GYPBP06028 91 aa24.53■■□□□ 1.52
CPNE1-203ENST00000397442 DAP3P51398 398 aaKnown RBP24.53■■□□□ 1.52
CPNE1-203ENST00000397442 LCN6P62502 163 aa24.53■■□□□ 1.52
CPNE1-203ENST00000397442 INAQ16352 499 aa24.53■■□□□ 1.52
CPNE1-203ENST00000397442 PDSS1Q5T2R2 415 aa24.53■■□□□ 1.52
CPNE1-203ENST00000397442 ADCK1Q86TW2 530 aa24.53■■□□□ 1.52
CPNE1-203ENST00000397442 MEIOBQ8N635 442 aa24.53■■□□□ 1.52
CPNE1-203ENST00000397442 CPNE4Q96A23 557 aaPredicted RBP24.53■■□□□ 1.52
CPNE1-203ENST00000397442 OR51V1Q9H2C8 321 aa24.53■■□□□ 1.52
CPNE1-203ENST00000397442 CCNB1IP1Q9NPC3 277 aa24.53■■□□□ 1.52
CPNE1-203ENST00000397442 ZNF71Q9NQZ8 489 aaPredicted RBP24.53■■□□□ 1.52
CPNE1-203ENST00000397442 PLSCR2Q9NRY7 297 aa24.53■■□□□ 1.52
CPNE1-203ENST00000397442 NPIPA1Q9UND3 350 aa24.53■■□□□ 1.52
CPNE1-203ENST00000397442 TMEM8BA6NDV4 472 aa24.53■■□□□ 1.52
CPNE1-203ENST00000397442 SNTNA6NMZ2 147 aa24.53■■□□□ 1.52
CPNE1-203ENST00000397442 VAMP5O95183 116 aa24.53■■□□□ 1.52
CPNE1-203ENST00000397442 MTNR1AP48039 350 aa24.53■■□□□ 1.52
CPNE1-203ENST00000397442 TUBA4AP68366 448 aa24.53■■□□□ 1.52
CPNE1-203ENST00000397442 ST3GAL4Q11206 333 aa24.53■■□□□ 1.52
CPNE1-203ENST00000397442 SLC17A1Q14916 467 aa24.53■■□□□ 1.52
CPNE1-203ENST00000397442 POU4F3Q15319 338 aa24.53■■□□□ 1.52
CPNE1-203ENST00000397442 NADK2Q4G0N4 442 aa24.53■■□□□ 1.52
CPNE1-203ENST00000397442 ZNRF4Q8WWF5 429 aa24.53■■□□□ 1.52
CPNE1-203ENST00000397442 WDYHV1Q96HA8 205 aa24.53■■□□□ 1.52
CPNE1-203ENST00000397442 SNX18Q96RF0 628 aa24.53■■□□□ 1.52
CPNE1-203ENST00000397442 TIGARQ9NQ88 270 aa24.53■■□□□ 1.52
CPNE1-203ENST00000397442 ASB6Q9NWX5 421 aa24.53■■□□□ 1.52
CPNE1-203ENST00000397442 LUZP4Q9P127 313 aa24.53■■□□□ 1.52
CPNE1-203ENST00000397442 PRSS37A4D1T9 235 aa24.52■■□□□ 1.52
CPNE1-203ENST00000397442 XKRYO14609 159 aa24.52■■□□□ 1.52
CPNE1-203ENST00000397442 RGS10O43665 173 aa24.52■■□□□ 1.52
CPNE1-203ENST00000397442 CDK1P06493 297 aa24.52■■□□□ 1.52
CPNE1-203ENST00000397442 STSP08842 583 aa24.52■■□□□ 1.52
CPNE1-203ENST00000397442 CPN1P15169 458 aa24.52■■□□□ 1.52
CPNE1-203ENST00000397442 C21orf33P30042 268 aaPredicted RBP24.52■■□□□ 1.52
CPNE1-203ENST00000397442 SLC25A1P53007 311 aa24.52■■□□□ 1.52
CPNE1-203ENST00000397442 C3AR1Q16581 482 aa24.52■■□□□ 1.52
CPNE1-203ENST00000397442 KLHL12Q53G59 568 aa24.52■■□□□ 1.52
CPNE1-203ENST00000397442 B3GLCTQ6Y288 498 aa24.52■■□□□ 1.52
CPNE1-203ENST00000397442 SPARTQ8N0X7 666 aa24.52■■□□□ 1.52
CPNE1-203ENST00000397442 KDF1Q8NAX2 398 aaPredicted RBP24.52■■□□□ 1.52
CPNE1-203ENST00000397442 ROBO4Q8WZ75 1007 aa24.52■■□□□ 1.52
CPNE1-203ENST00000397442 LGALS12Q96DT0 336 aa24.52■■□□□ 1.52
CPNE1-203ENST00000397442 RNFT2Q96EX2 444 aa24.52■■□□□ 1.52
CPNE1-203ENST00000397442 TSSK2Q96PF2 358 aa24.52■■□□□ 1.52
CPNE1-203ENST00000397442 TEAD3Q99594 435 aa24.52■■□□□ 1.52
CPNE1-203ENST00000397442 RPRD1BQ9NQG5 326 aaKnown RBP24.52■■□□□ 1.52
CPNE1-203ENST00000397442 VSX1Q9NZR4 365 aaPredicted RBP24.52■■□□□ 1.52
CPNE1-203ENST00000397442 DCTN6O00399 190 aa24.51■■□□□ 1.51
CPNE1-203ENST00000397442 CLPTM1O96005 669 aa24.51■■□□□ 1.51
CPNE1-203ENST00000397442 MT-ND2P03891 347 aa24.51■■□□□ 1.51
CPNE1-203ENST00000397442 TFAP2AP05549 437 aa24.51■■□□□ 1.51
CPNE1-203ENST00000397442 ZNF43P17038 809 aa24.51■■□□□ 1.51
CPNE1-203ENST00000397442 SPI1P17947 270 aa24.51■■□□□ 1.51
CPNE1-203ENST00000397442 ABLIM2Q6H8Q1 611 aa24.51■■□□□ 1.51
CPNE1-203ENST00000397442 PRSS48Q7RTY5 328 aa24.51■■□□□ 1.51
CPNE1-203ENST00000397442 C9orf43Q8TAL5 461 aaPredicted RBP24.51■■□□□ 1.51
CPNE1-203ENST00000397442 MYDGFQ969H8 173 aa24.51■■□□□ 1.51
CPNE1-203ENST00000397442 EMC6Q9BV81 110 aa24.51■■□□□ 1.51
CPNE1-203ENST00000397442 SYT4Q9H2B2 425 aa24.51■■□□□ 1.51
CPNE1-203ENST00000397442 TUBD1Q9UJT1 453 aa24.51■■□□□ 1.51
CPNE1-203ENST00000397442 A6NIZ1 184 aa24.5■■□□□ 1.51
CPNE1-203ENST00000397442 BIDP55957 195 aa24.5■■□□□ 1.51
CPNE1-203ENST00000397442 RAP1BP61224 184 aa24.5■■□□□ 1.51
CPNE1-203ENST00000397442 RAP1AP62834 184 aa24.5■■□□□ 1.51
CPNE1-203ENST00000397442 C1DQ13901 141 aaKnown RBP24.5■■□□□ 1.51
CPNE1-203ENST00000397442 FAM205BPQ63HN1 556 aa24.5■■□□□ 1.51
CPNE1-203ENST00000397442 CREB3L2Q70SY1 520 aa24.5■■□□□ 1.51
CPNE1-203ENST00000397442 PM20D2Q8IYS1 436 aa24.5■■□□□ 1.51
CPNE1-203ENST00000397442 OR9K2Q8NGE7 335 aa24.5■■□□□ 1.51
CPNE1-203ENST00000397442 SF3B5Q9BWJ5 86 aaKnown RBP24.5■■□□□ 1.51
CPNE1-203ENST00000397442 WARS2Q9UGM6 360 aaKnown RBP24.5■■□□□ 1.51
CPNE1-203ENST00000397442 SPENQ96T58 3664 aaKnown RBP24.5■■□□□ 1.51
CPNE1-203ENST00000397442 PRRC2CQ9Y520 2896 aaKnown RBP24.5■■□□□ 1.51
CPNE1-203ENST00000397442 PIEZO2Q9H5I5 2752 aa24.5■■□□□ 1.51
CPNE1-203ENST00000397442 SLC22A31A6NKX4 558 aa24.5■■□□□ 1.51
CPNE1-203ENST00000397442 ZNF716A6NP11 495 aa24.5■■□□□ 1.51
CPNE1-203ENST00000397442 AQP7O14520 342 aa24.5■■□□□ 1.51
CPNE1-203ENST00000397442 MRPS14O60783 128 aaKnown RBP24.5■■□□□ 1.51
CPNE1-203ENST00000397442 B3GNT6Q6ZMB0 384 aa24.5■■□□□ 1.51
CPNE1-203ENST00000397442 Q8NA96 180 aa24.5■■□□□ 1.51
CPNE1-203ENST00000397442 OR52I1Q8NGK6 324 aa24.5■■□□□ 1.51
CPNE1-203ENST00000397442 PNPLA2Q96AD5 504 aa24.5■■□□□ 1.51
CPNE1-203ENST00000397442 KCNK17Q96T54 332 aa24.5■■□□□ 1.51
CPNE1-203ENST00000397442 CCDC90BQ9GZT6 254 aa24.5■■□□□ 1.51
CPNE1-203ENST00000397442 SLC22A23A1A5C7 686 aa24.49■■□□□ 1.51
CPNE1-203ENST00000397442 M0R3G1 203 aa24.49■■□□□ 1.51
CPNE1-203ENST00000397442 APOL3O95236 402 aa24.49■■□□□ 1.51
CPNE1-203ENST00000397442 RENP00797 406 aa24.49■■□□□ 1.51
CPNE1-203ENST00000397442 GSTT1P30711 240 aa24.49■■□□□ 1.51
CPNE1-203ENST00000397442 RPS3AP61247 264 aaKnown RBP24.49■■□□□ 1.51
CPNE1-203ENST00000397442 RAB40BQ12829 278 aa24.49■■□□□ 1.51
CPNE1-203ENST00000397442 TMED1Q13445 227 aa24.49■■□□□ 1.51
CPNE1-203ENST00000397442 GTF2IRD2BQ6EKJ0 949 aa24.49■■□□□ 1.51
CPNE1-203ENST00000397442 GTF2IRD2Q86UP8 949 aa24.49■■□□□ 1.51
CPNE1-203ENST00000397442 OR6V1Q8N148 313 aa24.49■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms