RNA–Protein interactions for RNA: ENST00000393454.6

TDP1-203, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 2,068 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-203ENST00000393454 CAB39Q9Y376 341 aaPredicted RBP7.76□□□□□ -1.17
TDP1-203ENST00000393454 PCDHGB7Q9Y5F8 929 aa7.76□□□□□ -1.17
TDP1-203ENST00000393454 ALPK2Q86TB3 2170 aa7.76□□□□□ -1.17
TDP1-203ENST00000393454 A0A1W2PQL4 384 aaPredicted RBP7.75□□□□□ -1.17
TDP1-203ENST00000393454 DCDC2BA2VCK2 349 aa7.75□□□□□ -1.17
TDP1-203ENST00000393454 PRSS37A4D1T9 235 aa7.75□□□□□ -1.17
TDP1-203ENST00000393454 TRABD2BA6NFA1 517 aa7.75□□□□□ -1.17
TDP1-203ENST00000393454 A6NIZ1 184 aa7.75□□□□□ -1.17
TDP1-203ENST00000393454 LRRC3CA6NJW4 275 aa7.75□□□□□ -1.17
TDP1-203ENST00000393454 J3QLW9 94 aa7.75□□□□□ -1.17
TDP1-203ENST00000393454 ZNF17P17021 662 aa7.75□□□□□ -1.17
TDP1-203ENST00000393454 ZNF19P17023 458 aa7.75□□□□□ -1.17
TDP1-203ENST00000393454 PSMA1P25786 263 aaKnown RBP7.75□□□□□ -1.17
TDP1-203ENST00000393454 RFC3P40938 356 aa7.75□□□□□ -1.17
TDP1-203ENST00000393454 DAP3P51398 398 aaKnown RBP7.75□□□□□ -1.17
TDP1-203ENST00000393454 CCL11P51671 97 aa7.75□□□□□ -1.17
TDP1-203ENST00000393454 RAP1BP61224 184 aa7.75□□□□□ -1.17
TDP1-203ENST00000393454 RAP1AP62834 184 aa7.75□□□□□ -1.17
TDP1-203ENST00000393454 SLC35A1P78382 337 aa7.75□□□□□ -1.17
TDP1-203ENST00000393454 TIMM50Q3ZCQ8 353 aa7.75□□□□□ -1.17
TDP1-203ENST00000393454 LYPD4Q6UWN0 246 aa7.75□□□□□ -1.17
TDP1-203ENST00000393454 TMPPEQ6ZT21 453 aa7.75□□□□□ -1.17
TDP1-203ENST00000393454 SLC35D2Q76EJ3 337 aa7.75□□□□□ -1.17
TDP1-203ENST00000393454 UEVLDQ8IX04 471 aa7.75□□□□□ -1.17
TDP1-203ENST00000393454 OR6V1Q8N148 313 aa7.75□□□□□ -1.17
TDP1-203ENST00000393454 ZNF511Q8NB15 262 aa7.75□□□□□ -1.17
TDP1-203ENST00000393454 SYT14Q8NB59 555 aa7.75□□□□□ -1.17
TDP1-203ENST00000393454 OR2M7Q8NG81 312 aa7.75□□□□□ -1.17
TDP1-203ENST00000393454 OR52N1Q8NH53 320 aa7.75□□□□□ -1.17
TDP1-203ENST00000393454 ZNF519Q8TB69 540 aa7.75□□□□□ -1.17
TDP1-203ENST00000393454 TM9SF4Q92544 642 aa7.75□□□□□ -1.17
TDP1-203ENST00000393454 UFD1Q92890 307 aa7.75□□□□□ -1.17
TDP1-203ENST00000393454 TMEM203Q969S6 136 aa7.75□□□□□ -1.17
TDP1-203ENST00000393454 SFXN2Q96NB2 322 aa7.75□□□□□ -1.17
TDP1-203ENST00000393454 FAM173AQ9BQD7 235 aa7.75□□□□□ -1.17
TDP1-203ENST00000393454 ZNF649Q9BS31 505 aa7.75□□□□□ -1.17
TDP1-203ENST00000393454 NUAK2Q9H093 628 aa7.75□□□□□ -1.17
TDP1-203ENST00000393454 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.75□□□□□ -1.17
TDP1-203ENST00000393454 TRAPPC4Q9Y296 219 aa7.75□□□□□ -1.17
TDP1-203ENST00000393454 NCKAP5O14513 1909 aa7.75□□□□□ -1.17
TDP1-203ENST00000393454 TVP23AA6NH52 213 aa7.75□□□□□ -1.17
TDP1-203ENST00000393454 TRIM64BA6NI03 449 aa7.75□□□□□ -1.17
TDP1-203ENST00000393454 GJE1A6NN92 205 aa7.75□□□□□ -1.17
TDP1-203ENST00000393454 DCTN6O00399 190 aa7.75□□□□□ -1.17
TDP1-203ENST00000393454 AKAP8O43823 692 aaKnown RBP7.75□□□□□ -1.17
TDP1-203ENST00000393454 GFRA3O60609 400 aa7.75□□□□□ -1.17
TDP1-203ENST00000393454 SLC16A7O60669 478 aa7.75□□□□□ -1.17
TDP1-203ENST00000393454 IGHMP01871 453 aa7.75□□□□□ -1.17
TDP1-203ENST00000393454 HLA-DQA2P01906 255 aa7.75□□□□□ -1.17
TDP1-203ENST00000393454 TFP02787 698 aa7.75□□□□□ -1.17
TDP1-203ENST00000393454 MT-ND5P03915 603 aa7.75□□□□□ -1.17
TDP1-203ENST00000393454 OR2T7P0C7T2 308 aa7.75□□□□□ -1.17
TDP1-203ENST00000393454 CPEP16870 476 aa7.75□□□□□ -1.17
TDP1-203ENST00000393454 RAC1P63000 192 aa7.75□□□□□ -1.17
TDP1-203ENST00000393454 ARG2P78540 354 aa7.75□□□□□ -1.17
TDP1-203ENST00000393454 PLGLB1Q02325 96 aa7.75□□□□□ -1.17
TDP1-203ENST00000393454 ZNF85Q03923 595 aa7.75□□□□□ -1.17
TDP1-203ENST00000393454 CAMK2BQ13554 666 aa7.75□□□□□ -1.17
TDP1-203ENST00000393454 GGTLC2Q14390 218 aa7.75□□□□□ -1.17
TDP1-203ENST00000393454 RTP5Q14D33 572 aa7.75□□□□□ -1.17
TDP1-203ENST00000393454 RSPO4Q2I0M5 234 aaPredicted RBP7.75□□□□□ -1.17
TDP1-203ENST00000393454 SOWAHCQ53LP3 525 aaPredicted RBP7.75□□□□□ -1.17
TDP1-203ENST00000393454 WIPI1Q5MNZ9 446 aaPredicted RBP7.75□□□□□ -1.17
TDP1-203ENST00000393454 PXKQ7Z7A4 578 aa7.75□□□□□ -1.17
TDP1-203ENST00000393454 ATCAYQ86WG3 371 aa7.75□□□□□ -1.17
TDP1-203ENST00000393454 SULF2Q8IWU5 870 aa7.75□□□□□ -1.17
TDP1-203ENST00000393454 PHC2Q8IXK0 858 aa7.75□□□□□ -1.17
TDP1-203ENST00000393454 EXD3Q8N9H8 876 aa7.75□□□□□ -1.17
TDP1-203ENST00000393454 FAM83FQ8NEG4 500 aaPredicted RBP7.75□□□□□ -1.17
TDP1-203ENST00000393454 OR2T27Q8NH04 317 aa7.75□□□□□ -1.17
TDP1-203ENST00000393454 ASB10Q8WXI3 467 aa7.75□□□□□ -1.17
TDP1-203ENST00000393454 MIB2Q96AX9 1013 aa7.75□□□□□ -1.17
TDP1-203ENST00000393454 DTNBP1Q96EV8 351 aa7.75□□□□□ -1.17
TDP1-203ENST00000393454 TXNDC15Q96J42 360 aa7.75□□□□□ -1.17
TDP1-203ENST00000393454 FOXN4Q96NZ1 517 aa7.75□□□□□ -1.17
TDP1-203ENST00000393454 CENPOQ9BU64 300 aa7.75□□□□□ -1.17
TDP1-203ENST00000393454 RNF167Q9H6Y7 350 aa7.75□□□□□ -1.17
TDP1-203ENST00000393454 ISYNA1Q9NPH2 558 aa7.75□□□□□ -1.17
TDP1-203ENST00000393454 NDUFB11Q9NX14 153 aa7.75□□□□□ -1.17
TDP1-203ENST00000393454 MED29Q9NX70 200 aa7.75□□□□□ -1.17
TDP1-203ENST00000393454 B4GALT7Q9UBV7 327 aa7.75□□□□□ -1.17
TDP1-203ENST00000393454 FREM2Q5SZK8 3169 aa7.75□□□□□ -1.17
TDP1-203ENST00000393454 SLC22A23A1A5C7 686 aa7.74□□□□□ -1.17
TDP1-203ENST00000393454 OR5H15A6NDH6 313 aa7.74□□□□□ -1.17
TDP1-203ENST00000393454 TNFSF11O14788 317 aa7.74□□□□□ -1.17
TDP1-203ENST00000393454 SEC14L5O43304 696 aa7.74□□□□□ -1.17
TDP1-203ENST00000393454 GPX5O75715 221 aa7.74□□□□□ -1.17
TDP1-203ENST00000393454 PMS2P2O95744 297 aa7.74□□□□□ -1.17
TDP1-203ENST00000393454 GPANK1O95872 356 aa7.74□□□□□ -1.17
TDP1-203ENST00000393454 LALBAP00709 142 aa7.74□□□□□ -1.17
TDP1-203ENST00000393454 CD46P15529 392 aa7.74□□□□□ -1.17
TDP1-203ENST00000393454 WT1P19544 449 aaPredicted RBP7.74□□□□□ -1.17
TDP1-203ENST00000393454 CELP19835 753 aa7.74□□□□□ -1.17
TDP1-203ENST00000393454 BIDP55957 195 aa7.74□□□□□ -1.17
TDP1-203ENST00000393454 RUNX1T1Q06455 604 aa7.74□□□□□ -1.17
TDP1-203ENST00000393454 CLN3Q13286 438 aa7.74□□□□□ -1.17
TDP1-203ENST00000393454 TPBGQ13641 420 aa7.74□□□□□ -1.17
TDP1-203ENST00000393454 TP53I3Q53FA7 332 aa7.74□□□□□ -1.17
TDP1-203ENST00000393454 LINC01590Q5TEZ4 76 aa7.74□□□□□ -1.17
TDP1-203ENST00000393454 EEF1A1P5Q5VTE0 462 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms