RNA–Protein interactions for RNA: ENST00000390996.1

RNU6-1009P-201, Transcript of RNA, U6 small nuclear 1009, pseudogene, humanhuman

BASIC

Gene RNU6-1009P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1009P-201ENST00000390996 DDOSTP39656 456 aa0.44□□□□□ -2.34
RNU6-1009P-201ENST00000390996 PKNOX1P55347 436 aa0.44□□□□□ -2.34
RNU6-1009P-201ENST00000390996 RPS21P63220 83 aaKnown RBP0.44□□□□□ -2.34
RNU6-1009P-201ENST00000390996 ARG2P78540 354 aa0.44□□□□□ -2.34
RNU6-1009P-201ENST00000390996 MXD4Q14582 209 aaPredicted RBP0.44□□□□□ -2.34
RNU6-1009P-201ENST00000390996 TRIP10Q15642 601 aa0.44□□□□□ -2.34
RNU6-1009P-201ENST00000390996 FAM133BQ5BKY9 247 aaKnown RBP0.44□□□□□ -2.34
RNU6-1009P-201ENST00000390996 CARD16Q5EG05 197 aa0.44□□□□□ -2.34
RNU6-1009P-201ENST00000390996 BEND3Q5T5X7 828 aa0.44□□□□□ -2.34
RNU6-1009P-201ENST00000390996 FAM71F2Q6NXP2 309 aa0.44□□□□□ -2.34
RNU6-1009P-201ENST00000390996 NIPAL3Q6P499 406 aa0.44□□□□□ -2.34
RNU6-1009P-201ENST00000390996 ZNF493Q6ZR52 646 aa0.44□□□□□ -2.34
RNU6-1009P-201ENST00000390996 MREGQ8N565 214 aa0.44□□□□□ -2.34
RNU6-1009P-201ENST00000390996 SPANXA2-OT1Q8N9U9 137 aa0.44□□□□□ -2.34
RNU6-1009P-201ENST00000390996 ZNF649Q9BS31 505 aa0.44□□□□□ -2.34
RNU6-1009P-201ENST00000390996 POPDC2Q9HBU9 364 aa0.44□□□□□ -2.34
RNU6-1009P-201ENST00000390996 COL22A1Q8NFW1 1626 aaPredicted RBP0.44□□□□□ -2.34
RNU6-1009P-201ENST00000390996 VWDEQ8N2E2 1590 aa0.44□□□□□ -2.34
RNU6-1009P-201ENST00000390996 UBE4BO95155 1302 aa0.43□□□□□ -2.34
RNU6-1009P-201ENST00000390996 IGKV1D-13A0A0B4J2D9 117 aa0.43□□□□□ -2.34
RNU6-1009P-201ENST00000390996 A0A1W2PNV4 684 aa0.43□□□□□ -2.34
RNU6-1009P-201ENST00000390996 FAM230AA0A1W2PPH8 454 aa0.43□□□□□ -2.34
RNU6-1009P-201ENST00000390996 SLC9B1P1A6NJY1 282 aa0.43□□□□□ -2.34
RNU6-1009P-201ENST00000390996 A8MUI8 341 aa0.43□□□□□ -2.34
RNU6-1009P-201ENST00000390996 CCER2I3L3R5 266 aa0.43□□□□□ -2.34
RNU6-1009P-201ENST00000390996 RASGRF2O14827 1237 aa0.43□□□□□ -2.34
RNU6-1009P-201ENST00000390996 KMOO15229 486 aa0.43□□□□□ -2.34
RNU6-1009P-201ENST00000390996 IGKV1-13P0DP09 117 aa0.43□□□□□ -2.34
RNU6-1009P-201ENST00000390996 MUTP22033 750 aa0.43□□□□□ -2.34
RNU6-1009P-201ENST00000390996 SFNP31947 248 aa0.43□□□□□ -2.34
RNU6-1009P-201ENST00000390996 KIF5BP33176 963 aa0.43□□□□□ -2.34
RNU6-1009P-201ENST00000390996 PON3Q15166 354 aa0.43□□□□□ -2.34
RNU6-1009P-201ENST00000390996 SLC25A52Q3SY17 297 aa0.43□□□□□ -2.34
RNU6-1009P-201ENST00000390996 CCDC40Q4G0X9 1142 aa0.43□□□□□ -2.34
RNU6-1009P-201ENST00000390996 PCOTHQ58A44 107 aa0.43□□□□□ -2.34
RNU6-1009P-201ENST00000390996 LDLRAP1Q5SW96 308 aa0.43□□□□□ -2.34
RNU6-1009P-201ENST00000390996 MORN3Q6PF18 240 aaPredicted RBP0.43□□□□□ -2.34
RNU6-1009P-201ENST00000390996 CASP12Q6UXS9 341 aa0.43□□□□□ -2.34
RNU6-1009P-201ENST00000390996 VSTM4Q8IW00 320 aa0.43□□□□□ -2.34
RNU6-1009P-201ENST00000390996 OR9A2Q8NGT5 310 aa0.43□□□□□ -2.34
RNU6-1009P-201ENST00000390996 OR8U1Q8NH10 309 aa0.43□□□□□ -2.34
RNU6-1009P-201ENST00000390996 COQ8AQ8NI60 647 aa0.43□□□□□ -2.34
RNU6-1009P-201ENST00000390996 HGDQ93099 445 aa0.43□□□□□ -2.34
RNU6-1009P-201ENST00000390996 SLC25A46Q96AG3 418 aa0.43□□□□□ -2.34
RNU6-1009P-201ENST00000390996 TMEM186Q96B77 213 aa0.43□□□□□ -2.34
RNU6-1009P-201ENST00000390996 TMEM159Q96B96 161 aa0.43□□□□□ -2.34
RNU6-1009P-201ENST00000390996 NSMCE2Q96MF7 247 aa0.43□□□□□ -2.34
RNU6-1009P-201ENST00000390996 ZNF681Q96N22 645 aa0.43□□□□□ -2.34
RNU6-1009P-201ENST00000390996 ZNF317Q96PQ6 595 aaPredicted RBP0.43□□□□□ -2.34
RNU6-1009P-201ENST00000390996 GSDMCQ9BYG8 508 aa0.43□□□□□ -2.34
RNU6-1009P-201ENST00000390996 RBKSQ9H477 322 aa0.43□□□□□ -2.34
RNU6-1009P-201ENST00000390996 ACTR8Q9H981 624 aa0.43□□□□□ -2.34
RNU6-1009P-201ENST00000390996 NEK6Q9HC98 313 aa0.43□□□□□ -2.34
RNU6-1009P-201ENST00000390996 SYTL2Q9HCH5 934 aa0.43□□□□□ -2.34
RNU6-1009P-201ENST00000390996 DDX19AQ9NUU7 478 aaKnown RBP0.43□□□□□ -2.34
RNU6-1009P-201ENST00000390996 ZNF639Q9UID6 485 aa0.43□□□□□ -2.34
RNU6-1009P-201ENST00000390996 PACSIN2Q9UNF0 486 aaPredicted RBP0.43□□□□□ -2.34
RNU6-1009P-201ENST00000390996 SCN1AP35498 2009 aa0.43□□□□□ -2.34
RNU6-1009P-201ENST00000390996 FANCIQ9NVI1 1328 aa0.42□□□□□ -2.34
RNU6-1009P-201ENST00000390996 A0A0U1RQV5 110 aa0.42□□□□□ -2.34
RNU6-1009P-201ENST00000390996 A0A1B0GVI7 797 aa0.42□□□□□ -2.34
RNU6-1009P-201ENST00000390996 CLDN5O00501 218 aa0.42□□□□□ -2.34
RNU6-1009P-201ENST00000390996 CRYBB1P53674 252 aaPredicted RBP0.42□□□□□ -2.34
RNU6-1009P-201ENST00000390996 NAPAP54920 295 aa0.42□□□□□ -2.34
RNU6-1009P-201ENST00000390996 FUT5Q11128 374 aa0.42□□□□□ -2.34
RNU6-1009P-201ENST00000390996 FAM53BQ14153 422 aa0.42□□□□□ -2.34
RNU6-1009P-201ENST00000390996 TP53I3Q53FA7 332 aa0.42□□□□□ -2.34
RNU6-1009P-201ENST00000390996 ARMC3Q5W041 872 aa0.42□□□□□ -2.34
RNU6-1009P-201ENST00000390996 PGAP1Q75T13 922 aa0.42□□□□□ -2.34
RNU6-1009P-201ENST00000390996 KIAA1328Q86T90 577 aa0.42□□□□□ -2.34
RNU6-1009P-201ENST00000390996 CALHM1Q8IU99 346 aa0.42□□□□□ -2.34
RNU6-1009P-201ENST00000390996 OR2L3Q8NG85 312 aa0.42□□□□□ -2.34
RNU6-1009P-201ENST00000390996 OR4K5Q8NGD3 323 aa0.42□□□□□ -2.34
RNU6-1009P-201ENST00000390996 LILRB4Q8NHJ6 448 aa0.42□□□□□ -2.34
RNU6-1009P-201ENST00000390996 PKMYT1Q99640 499 aa0.42□□□□□ -2.34
RNU6-1009P-201ENST00000390996 MRPL37Q9BZE1 423 aaKnown RBP0.42□□□□□ -2.34
RNU6-1009P-201ENST00000390996 LY9Q9HBG7 655 aa0.42□□□□□ -2.34
RNU6-1009P-201ENST00000390996 COPS3Q9UNS2 423 aa0.42□□□□□ -2.34
RNU6-1009P-201ENST00000390996 PRRC2BQ5JSZ5 2229 aaKnown RBP0.41□□□□□ -2.34
RNU6-1009P-201ENST00000390996 TMEM120BA0PK00 339 aa0.41□□□□□ -2.34
RNU6-1009P-201ENST00000390996 C5orf63A6NC05 138 aa0.41□□□□□ -2.34
RNU6-1009P-201ENST00000390996 PFKFB2O60825 505 aa0.41□□□□□ -2.34
RNU6-1009P-201ENST00000390996 IGLV2-8P01709 118 aa0.41□□□□□ -2.34
RNU6-1009P-201ENST00000390996 GAPDHP04406 335 aaKnown RBP0.41□□□□□ -2.34
RNU6-1009P-201ENST00000390996 IGKV1-16P04430 117 aa0.41□□□□□ -2.34
RNU6-1009P-201ENST00000390996 HLA-DPB1P04440 258 aa0.41□□□□□ -2.34
RNU6-1009P-201ENST00000390996 GNAO1P09471 354 aa0.41□□□□□ -2.34
RNU6-1009P-201ENST00000390996 IFI30P13284 250 aa0.41□□□□□ -2.34
RNU6-1009P-201ENST00000390996 HRES1P13985 223 aa0.41□□□□□ -2.34
RNU6-1009P-201ENST00000390996 RDXP35241 583 aaKnown RBP0.41□□□□□ -2.34
RNU6-1009P-201ENST00000390996 GSSP48637 474 aa0.41□□□□□ -2.34
RNU6-1009P-201ENST00000390996 PLA2G16P53816 162 aa0.41□□□□□ -2.34
RNU6-1009P-201ENST00000390996 VGLL4Q14135 290 aa0.41□□□□□ -2.34
RNU6-1009P-201ENST00000390996 AP1ARQ63HQ0 302 aa0.41□□□□□ -2.34
RNU6-1009P-201ENST00000390996 TPGS2Q68CL5 300 aa0.41□□□□□ -2.34
RNU6-1009P-201ENST00000390996 ETFRF1Q6IPR1 90 aa0.41□□□□□ -2.34
RNU6-1009P-201ENST00000390996 GUSBP11Q6P575 273 aa0.41□□□□□ -2.34
RNU6-1009P-201ENST00000390996 TMEM205Q6UW68 189 aa0.41□□□□□ -2.34
RNU6-1009P-201ENST00000390996 GNG12Q9UBI6 72 aa0.41□□□□□ -2.34
RNU6-1009P-201ENST00000390996 SVILO95425 2214 aa0.4□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms