RNA–Protein interactions for RNA: ENST00000390990.1

RNU6-239P-201, Transcript of RNA, U6 small nuclear 239, pseudogene, humanhuman

BASIC

Gene RNU6-239P, Length 99 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-239P-201ENST00000390990 DTD2Q96FN9 168 aa-0.37□□□□□ -2.47
RNU6-239P-201ENST00000390990 SEC22AQ96IW7 307 aa-0.37□□□□□ -2.47
RNU6-239P-201ENST00000390990 MRPL45Q9BRJ2 306 aaKnown RBP-0.37□□□□□ -2.47
RNU6-239P-201ENST00000390990 RANBP3Q9H6Z4 567 aaPredicted RBP-0.37□□□□□ -2.47
RNU6-239P-201ENST00000390990 EDA2RQ9HAV5 297 aa-0.37□□□□□ -2.47
RNU6-239P-201ENST00000390990 POLD4Q9HCU8 107 aa-0.37□□□□□ -2.47
RNU6-239P-201ENST00000390990 PALMDQ9NP74 551 aa-0.37□□□□□ -2.47
RNU6-239P-201ENST00000390990 KCNIP1Q9NZI2 227 aa-0.37□□□□□ -2.47
RNU6-239P-201ENST00000390990 ZNF492Q9P255 531 aa-0.37□□□□□ -2.47
RNU6-239P-201ENST00000390990 SEC14L3Q9UDX4 400 aa-0.37□□□□□ -2.47
RNU6-239P-201ENST00000390990 RNF6Q9Y252 685 aa-0.37□□□□□ -2.47
RNU6-239P-201ENST00000390990 K7EMT4 169 aa-0.38□□□□□ -2.47
RNU6-239P-201ENST00000390990 MANBAO00462 879 aa-0.38□□□□□ -2.47
RNU6-239P-201ENST00000390990 AQP9O43315 295 aa-0.38□□□□□ -2.47
RNU6-239P-201ENST00000390990 LHBP01229 141 aa-0.38□□□□□ -2.47
RNU6-239P-201ENST00000390990 OPN1LWP04000 364 aa-0.38□□□□□ -2.47
RNU6-239P-201ENST00000390990 FABP3P05413 133 aa-0.38□□□□□ -2.47
RNU6-239P-201ENST00000390990 HEXBP07686 556 aa-0.38□□□□□ -2.47
RNU6-239P-201ENST00000390990 CDKN2BP42772 138 aa-0.38□□□□□ -2.47
RNU6-239P-201ENST00000390990 HSD17B7P56937 341 aa-0.38□□□□□ -2.47
RNU6-239P-201ENST00000390990 TPBGQ13641 420 aa-0.38□□□□□ -2.47
RNU6-239P-201ENST00000390990 TOMM20Q15388 145 aa-0.38□□□□□ -2.47
RNU6-239P-201ENST00000390990 MICBQ29980 383 aa-0.38□□□□□ -2.47
RNU6-239P-201ENST00000390990 SAMD4BQ5PRF9 694 aaKnown RBP-0.38□□□□□ -2.47
RNU6-239P-201ENST00000390990 BEND3Q5T5X7 828 aa-0.38□□□□□ -2.47
RNU6-239P-201ENST00000390990 SYT10Q6XYQ8 523 aa-0.38□□□□□ -2.47
RNU6-239P-201ENST00000390990 ATP6V0D2Q8N8Y2 350 aa-0.38□□□□□ -2.47
RNU6-239P-201ENST00000390990 LEMD2Q8NC56 503 aa-0.38□□□□□ -2.47
RNU6-239P-201ENST00000390990 SLC6A7Q99884 636 aa-0.38□□□□□ -2.47
RNU6-239P-201ENST00000390990 SEC22CQ9BRL7 303 aa-0.38□□□□□ -2.47
RNU6-239P-201ENST00000390990 SLC35A5Q9BS91 424 aa-0.38□□□□□ -2.47
RNU6-239P-201ENST00000390990 AP1M1Q9BXS5 423 aa-0.38□□□□□ -2.47
RNU6-239P-201ENST00000390990 WDR76Q9H967 626 aa-0.38□□□□□ -2.47
RNU6-239P-201ENST00000390990 ASF1BQ9NVP2 202 aa-0.38□□□□□ -2.47
RNU6-239P-201ENST00000390990 HOXC10Q9NYD6 342 aa-0.38□□□□□ -2.47
RNU6-239P-201ENST00000390990 CALYQ9NYX4 217 aa-0.38□□□□□ -2.47
RNU6-239P-201ENST00000390990 SIGLEC8Q9NYZ4 499 aa-0.38□□□□□ -2.47
RNU6-239P-201ENST00000390990 TTLL3Q9Y4R7 772 aa-0.38□□□□□ -2.47
RNU6-239P-201ENST00000390990 IKBKGQ9Y6K9 419 aa-0.38□□□□□ -2.47
RNU6-239P-201ENST00000390990 SPACA6W5XKT8 324 aa-0.38□□□□□ -2.47
RNU6-239P-201ENST00000390990 STRCP1A6NGW2 1772 aa-0.38□□□□□ -2.47
RNU6-239P-201ENST00000390990 PLXNA3P51805 1871 aa-0.38□□□□□ -2.47
RNU6-239P-201ENST00000390990 FRMPD4Q14CM0 1322 aa-0.38□□□□□ -2.47
RNU6-239P-201ENST00000390990 IGKV1D-13A0A0B4J2D9 117 aa-0.39□□□□□ -2.47
RNU6-239P-201ENST00000390990 A0A0J9YXV3 536 aa-0.39□□□□□ -2.47
RNU6-239P-201ENST00000390990 LOC110117498-PIK3R3F6TDL0 507 aa-0.39□□□□□ -2.47
RNU6-239P-201ENST00000390990 STX6O43752 255 aa-0.39□□□□□ -2.47
RNU6-239P-201ENST00000390990 OPN1MWP04001 364 aa-0.39□□□□□ -2.47
RNU6-239P-201ENST00000390990 GAPDHP04406 335 aaKnown RBP-0.39□□□□□ -2.47
RNU6-239P-201ENST00000390990 UBTFL6P0CB48 400 aaPredicted RBP-0.39□□□□□ -2.47
RNU6-239P-201ENST00000390990 OPN1MW2P0DN77 364 aa-0.39□□□□□ -2.47
RNU6-239P-201ENST00000390990 OPN1MW3P0DN78 364 aa-0.39□□□□□ -2.47
RNU6-239P-201ENST00000390990 IGKV1-13P0DP09 117 aa-0.39□□□□□ -2.47
RNU6-239P-201ENST00000390990 SCG2P13521 617 aa-0.39□□□□□ -2.47
RNU6-239P-201ENST00000390990 PTGFRP43088 359 aa-0.39□□□□□ -2.47
RNU6-239P-201ENST00000390990 IDH2P48735 452 aaKnown RBP-0.39□□□□□ -2.47
RNU6-239P-201ENST00000390990 RBP5P82980 135 aa-0.39□□□□□ -2.47
RNU6-239P-201ENST00000390990 YWHAHQ04917 246 aaPredicted RBP-0.39□□□□□ -2.47
RNU6-239P-201ENST00000390990 SLC9A3R2Q15599 337 aa-0.39□□□□□ -2.47
RNU6-239P-201ENST00000390990 CPTPQ5TA50 214 aa-0.39□□□□□ -2.47
RNU6-239P-201ENST00000390990 SLC16A13Q7RTY0 426 aa-0.39□□□□□ -2.47
RNU6-239P-201ENST00000390990 ZNF410Q86VK4 478 aa-0.39□□□□□ -2.47
RNU6-239P-201ENST00000390990 ZNF101Q8IZC7 436 aa-0.39□□□□□ -2.47
RNU6-239P-201ENST00000390990 LPCAT1Q8NF37 534 aa-0.39□□□□□ -2.47
RNU6-239P-201ENST00000390990 OR5L2Q8NGL0 311 aa-0.39□□□□□ -2.47
RNU6-239P-201ENST00000390990 RNASE11Q8TAA1 199 aaKnown RBP-0.39□□□□□ -2.47
RNU6-239P-201ENST00000390990 FIBINQ8TAL6 211 aa-0.39□□□□□ -2.47
RNU6-239P-201ENST00000390990 ZNF488Q96MN9 340 aa-0.39□□□□□ -2.47
RNU6-239P-201ENST00000390990 GCOM2Q9BZD3 368 aaPredicted RBP-0.39□□□□□ -2.47
RNU6-239P-201ENST00000390990 C1orf198Q9H425 327 aa-0.39□□□□□ -2.47
RNU6-239P-201ENST00000390990 SAV1Q9H4B6 383 aaPredicted RBP-0.39□□□□□ -2.47
RNU6-239P-201ENST00000390990 TSSC4Q9Y5U2 329 aaPredicted RBP-0.39□□□□□ -2.47
RNU6-239P-201ENST00000390990 KMT2EQ8IZD2 1858 aa-0.39□□□□□ -2.47
RNU6-239P-201ENST00000390990 SSPOA2VEC9 5147 aa-0.4□□□□□ -2.47
RNU6-239P-201ENST00000390990 NAV2Q8IVL1 2488 aa-0.4□□□□□ -2.47
RNU6-239P-201ENST00000390990 DOCK6Q96HP0 2047 aa-0.4□□□□□ -2.47
RNU6-239P-201ENST00000390990 CEACAM18A8MTB9 384 aa-0.4□□□□□ -2.47
RNU6-239P-201ENST00000390990 TRDCB7Z8K6 153 aa-0.4□□□□□ -2.47
RNU6-239P-201ENST00000390990 H7C417 338 aa-0.4□□□□□ -2.47
RNU6-239P-201ENST00000390990 MFNGO00587 321 aa-0.4□□□□□ -2.47
RNU6-239P-201ENST00000390990 CXCL13O43927 109 aa-0.4□□□□□ -2.47
RNU6-239P-201ENST00000390990 NDUFB10O96000 172 aa-0.4□□□□□ -2.47
RNU6-239P-201ENST00000390990 CCDC130P13994 396 aa-0.4□□□□□ -2.47
RNU6-239P-201ENST00000390990 PCMT1P22061 227 aa-0.4□□□□□ -2.47
RNU6-239P-201ENST00000390990 YWHABP31946 246 aaKnown RBP-0.4□□□□□ -2.47
RNU6-239P-201ENST00000390990 CRYBB1P53674 252 aaPredicted RBP-0.4□□□□□ -2.47
RNU6-239P-201ENST00000390990 PPP1CBP62140 327 aa-0.4□□□□□ -2.47
RNU6-239P-201ENST00000390990 MAD2L1BPQ15013 274 aaPredicted RBP-0.4□□□□□ -2.47
RNU6-239P-201ENST00000390990 RGNQ15493 299 aa-0.4□□□□□ -2.47
RNU6-239P-201ENST00000390990 TMEM270Q6UE05 265 aa-0.4□□□□□ -2.47
RNU6-239P-201ENST00000390990 ABHD13Q7L211 337 aa-0.4□□□□□ -2.47
RNU6-239P-201ENST00000390990 WDFY1Q8IWB7 410 aa-0.4□□□□□ -2.47
RNU6-239P-201ENST00000390990 TMEM185AQ8NFB2 350 aa-0.4□□□□□ -2.47
RNU6-239P-201ENST00000390990 NANPQ8TBE9 248 aa-0.4□□□□□ -2.47
RNU6-239P-201ENST00000390990 HTR3CQ8WXA8 447 aa-0.4□□□□□ -2.47
RNU6-239P-201ENST00000390990 IGF2BP2-AS1Q96M15 143 aa-0.4□□□□□ -2.47
RNU6-239P-201ENST00000390990 ZFP3Q96NJ6 502 aa-0.4□□□□□ -2.47
RNU6-239P-201ENST00000390990 OR52D1Q9H346 318 aa-0.4□□□□□ -2.47
RNU6-239P-201ENST00000390990 ZSCAN16Q9H4T2 348 aaPredicted RBP-0.4□□□□□ -2.47
RNU6-239P-201ENST00000390990 CTSFQ9UBX1 484 aa-0.4□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms