RNA–Protein interactions for RNA: ENST00000384706.1

SNORD28-201, Transcript of small nucleolar RNA, C/D box 28, humanhuman

BASIC

Gene SNORD28, Length 75 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28-201ENST00000384706 MMADHCQ9H3L0 296 aaPredicted RBP0□□□□□ -2.41
SNORD28-201ENST00000384706 RANBP3Q9H6Z4 567 aaPredicted RBP0□□□□□ -2.41
SNORD28-201ENST00000384706 UBE2ZQ9H832 354 aaPredicted RBP0□□□□□ -2.41
SNORD28-201ENST00000384706 WDR76Q9H967 626 aa0□□□□□ -2.41
SNORD28-201ENST00000384706 LY9Q9HBG7 655 aa0□□□□□ -2.41
SNORD28-201ENST00000384706 MCCC2Q9HCC0 563 aa0□□□□□ -2.41
SNORD28-201ENST00000384706 ISYNA1Q9NPH2 558 aa0□□□□□ -2.41
SNORD28-201ENST00000384706 RDH8Q9NYR8 311 aa0□□□□□ -2.41
SNORD28-201ENST00000384706 TAS2R1Q9NYW7 299 aa0□□□□□ -2.41
SNORD28-201ENST00000384706 CALYQ9NYX4 217 aa0□□□□□ -2.41
SNORD28-201ENST00000384706 TMOD2Q9NZR1 351 aa0□□□□□ -2.41
SNORD28-201ENST00000384706 SPATA7Q9P0W8 599 aa0□□□□□ -2.41
SNORD28-201ENST00000384706 XCL2Q9UBD3 114 aa0□□□□□ -2.41
SNORD28-201ENST00000384706 CTSFQ9UBX1 484 aa0□□□□□ -2.41
SNORD28-201ENST00000384706 SEC14L3Q9UDX4 400 aa0□□□□□ -2.41
SNORD28-201ENST00000384706 KCNN3Q9UGI6 736 aa0□□□□□ -2.41
SNORD28-201ENST00000384706 KIAA1257Q9ULG3 409 aa0□□□□□ -2.41
SNORD28-201ENST00000384706 NPIPA1Q9UND3 350 aa0□□□□□ -2.41
SNORD28-201ENST00000384706 PACSIN2Q9UNF0 486 aaPredicted RBP0□□□□□ -2.41
SNORD28-201ENST00000384706 PSG8Q9UQ74 426 aa0□□□□□ -2.41
SNORD28-201ENST00000384706 RNF6Q9Y252 685 aa0□□□□□ -2.41
SNORD28-201ENST00000384706 CBY1Q9Y3M2 126 aa0□□□□□ -2.41
SNORD28-201ENST00000384706 IKBKGQ9Y6K9 419 aa0□□□□□ -2.41
SNORD28-201ENST00000384706 CCDC88CQ9P219 2028 aa-0.01□□□□□ -2.41
SNORD28-201ENST00000384706 COL4A1P02462 1669 aa-0.01□□□□□ -2.41
SNORD28-201ENST00000384706 CUX2O14529 1486 aa-0.01□□□□□ -2.41
SNORD28-201ENST00000384706 DHX29Q7Z478 1369 aaKnown RBP-0.01□□□□□ -2.41
SNORD28-201ENST00000384706 FRMPD4Q14CM0 1322 aa-0.01□□□□□ -2.41
SNORD28-201ENST00000384706 RPGRIP1LQ68CZ1 1315 aa-0.01□□□□□ -2.41
SNORD28-201ENST00000384706 ZBED9Q6R2W3 1325 aa-0.01□□□□□ -2.41
SNORD28-201ENST00000384706 ADGRA3Q8IWK6 1321 aa-0.01□□□□□ -2.41
SNORD28-201ENST00000384706 FANCIQ9NVI1 1328 aa-0.01□□□□□ -2.41
SNORD28-201ENST00000384706 USP24Q9UPU5 2620 aa-0.01□□□□□ -2.41
SNORD28-201ENST00000384706 A0A0U1RQV1 116 aa-0.01□□□□□ -2.41
SNORD28-201ENST00000384706 RNF222A6NCQ9 220 aa-0.01□□□□□ -2.41
SNORD28-201ENST00000384706 TRDCB7Z8K6 153 aa-0.01□□□□□ -2.41
SNORD28-201ENST00000384706 LOC110117498-PIK3R3F6TDL0 507 aa-0.01□□□□□ -2.41
SNORD28-201ENST00000384706 H0YJW9 148 aa-0.01□□□□□ -2.41
SNORD28-201ENST00000384706 H7C417 338 aa-0.01□□□□□ -2.41
SNORD28-201ENST00000384706 CCER2I3L3R5 266 aa-0.01□□□□□ -2.41
SNORD28-201ENST00000384706 K7EMT4 169 aa-0.01□□□□□ -2.41
SNORD28-201ENST00000384706 MFNGO00587 321 aa-0.01□□□□□ -2.41
SNORD28-201ENST00000384706 AQP9O43315 295 aa-0.01□□□□□ -2.41
SNORD28-201ENST00000384706 CXCL13O43927 109 aa-0.01□□□□□ -2.41
SNORD28-201ENST00000384706 B3GAT3O94766 335 aa-0.01□□□□□ -2.41
SNORD28-201ENST00000384706 IGKV1-39P01597 117 aa-0.01□□□□□ -2.41
SNORD28-201ENST00000384706 IGKV1D-39P04432 117 aa-0.01□□□□□ -2.41
SNORD28-201ENST00000384706 ASGR1P07306 291 aa-0.01□□□□□ -2.41
SNORD28-201ENST00000384706 HEXBP07686 556 aa-0.01□□□□□ -2.41
SNORD28-201ENST00000384706 LDHCP07864 332 aa-0.01□□□□□ -2.41
SNORD28-201ENST00000384706 ZNF688P0C7X2 276 aa-0.01□□□□□ -2.41
SNORD28-201ENST00000384706 P0DMU3 169 aa-0.01□□□□□ -2.41
SNORD28-201ENST00000384706 FAM231AP0DMU4 169 aa-0.01□□□□□ -2.41
SNORD28-201ENST00000384706 FAM231CP0DMU5 169 aa-0.01□□□□□ -2.41
SNORD28-201ENST00000384706 CGB7P0DN87 165 aa-0.01□□□□□ -2.41
SNORD28-201ENST00000384706 RALAP11233 206 aa-0.01□□□□□ -2.41
SNORD28-201ENST00000384706 COX5AP20674 150 aa-0.01□□□□□ -2.41
SNORD28-201ENST00000384706 DTYMKP23919 212 aa-0.01□□□□□ -2.41
SNORD28-201ENST00000384706 AK4P27144 223 aaPredicted RBP-0.01□□□□□ -2.41
SNORD28-201ENST00000384706 CASP14P31944 242 aa-0.01□□□□□ -2.41
SNORD28-201ENST00000384706 CEACAM6P40199 344 aa-0.01□□□□□ -2.41
SNORD28-201ENST00000384706 IDH2P48735 452 aaKnown RBP-0.01□□□□□ -2.41
SNORD28-201ENST00000384706 CCNG1P51959 295 aa-0.01□□□□□ -2.41
SNORD28-201ENST00000384706 CRYBB1P53674 252 aaPredicted RBP-0.01□□□□□ -2.41
SNORD28-201ENST00000384706 RPS14P62263 151 aaKnown RBP-0.01□□□□□ -2.41
SNORD28-201ENST00000384706 PPIDQ08752 370 aaKnown RBP-0.01□□□□□ -2.41
SNORD28-201ENST00000384706 MAB21L1Q13394 359 aa-0.01□□□□□ -2.41
SNORD28-201ENST00000384706 SNX1Q13596 522 aa-0.01□□□□□ -2.41
SNORD28-201ENST00000384706 TPBGQ13641 420 aa-0.01□□□□□ -2.41
SNORD28-201ENST00000384706 PON3Q15166 354 aa-0.01□□□□□ -2.41
SNORD28-201ENST00000384706 SLC15A2Q16348 729 aa-0.01□□□□□ -2.41
SNORD28-201ENST00000384706 GLRA4Q5JXX5 417 aa-0.01□□□□□ -2.41
SNORD28-201ENST00000384706 CPTPQ5TA50 214 aa-0.01□□□□□ -2.41
SNORD28-201ENST00000384706 GUSBP11Q6P575 273 aa-0.01□□□□□ -2.41
SNORD28-201ENST00000384706 TMEM205Q6UW68 189 aa-0.01□□□□□ -2.41
SNORD28-201ENST00000384706 C16orf47Q6ZP98 133 aaPredicted RBP-0.01□□□□□ -2.41
SNORD28-201ENST00000384706 TMPPEQ6ZT21 453 aa-0.01□□□□□ -2.41
SNORD28-201ENST00000384706 WDFY1Q8IWB7 410 aa-0.01□□□□□ -2.41
SNORD28-201ENST00000384706 TMEM256Q8N2U0 113 aa-0.01□□□□□ -2.41
SNORD28-201ENST00000384706 FNDC5Q8NAU1 212 aa-0.01□□□□□ -2.41
SNORD28-201ENST00000384706 LY6G5BQ8NDX9 201 aa-0.01□□□□□ -2.41
SNORD28-201ENST00000384706 VN1R2Q8NFZ6 395 aa-0.01□□□□□ -2.41
SNORD28-201ENST00000384706 OR5L2Q8NGL0 311 aa-0.01□□□□□ -2.41
SNORD28-201ENST00000384706 OR5D13Q8NGL4 314 aa-0.01□□□□□ -2.41
SNORD28-201ENST00000384706 GOT1L1Q8NHS2 421 aaPredicted RBP-0.01□□□□□ -2.41
SNORD28-201ENST00000384706 GIPC3Q8TF64 312 aa-0.01□□□□□ -2.41
SNORD28-201ENST00000384706 SDR42E1Q8WUS8 393 aa-0.01□□□□□ -2.41
SNORD28-201ENST00000384706 C17orf50Q8WW18 174 aa-0.01□□□□□ -2.41
SNORD28-201ENST00000384706 FCGR1BQ92637 280 aa-0.01□□□□□ -2.41
SNORD28-201ENST00000384706 N4BP2L2Q92802 583 aaPredicted RBP-0.01□□□□□ -2.41
SNORD28-201ENST00000384706 SGK3Q96BR1 496 aa-0.01□□□□□ -2.41
SNORD28-201ENST00000384706 ZNF488Q96MN9 340 aa-0.01□□□□□ -2.41
SNORD28-201ENST00000384706 RNF145Q96MT1 663 aa-0.01□□□□□ -2.41
SNORD28-201ENST00000384706 ZNF681Q96N22 645 aa-0.01□□□□□ -2.41
SNORD28-201ENST00000384706 IP6K3Q96PC2 410 aa-0.01□□□□□ -2.41
SNORD28-201ENST00000384706 NAP1L3Q99457 506 aaPredicted RBP-0.01□□□□□ -2.41
SNORD28-201ENST00000384706 SEC22CQ9BRL7 303 aa-0.01□□□□□ -2.41
SNORD28-201ENST00000384706 SLC25A2Q9BXI2 301 aa-0.01□□□□□ -2.41
SNORD28-201ENST00000384706 RAB34Q9BZG1 259 aa-0.01□□□□□ -2.41
SNORD28-201ENST00000384706 MAF1Q9H063 256 aa-0.01□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms