RNA–Protein interactions for RNA: ENST00000381150.5

SDC1-202, Transcript of syndecan 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SDC1, Length 3,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-202ENST00000381150 SMCO1Q147U7 214 aa12.66□□□□□ -0.38
SDC1-202ENST00000381150 UBXN2BQ14CS0 331 aa12.66□□□□□ -0.38
SDC1-202ENST00000381150 RHOUQ7L0Q8 258 aa12.66□□□□□ -0.38
SDC1-202ENST00000381150 OR2W3Q7Z3T1 314 aa12.66□□□□□ -0.38
SDC1-202ENST00000381150 TMPRSS9Q7Z410 1059 aa12.66□□□□□ -0.38
SDC1-202ENST00000381150 GLB1L2Q8IW92 636 aa12.66□□□□□ -0.38
SDC1-202ENST00000381150 CNN2Q99439 309 aaKnown RBP12.66□□□□□ -0.38
SDC1-202ENST00000381150 RPP25Q9BUL9 199 aaKnown RBP12.66□□□□□ -0.38
SDC1-202ENST00000381150 TINAGL1Q9GZM7 467 aaPredicted RBP12.66□□□□□ -0.38
SDC1-202ENST00000381150 FOXJ3Q9UPW0 622 aa12.66□□□□□ -0.38
SDC1-202ENST00000381150 SLC17A4Q9Y2C5 497 aa12.66□□□□□ -0.38
SDC1-202ENST00000381150 FAM96BQ9Y3D0 163 aa12.66□□□□□ -0.38
SDC1-202ENST00000381150 ANKRD20A5PA0PJZ0 165 aa12.66□□□□□ -0.38
SDC1-202ENST00000381150 LRRC72A6NJI9 287 aa12.66□□□□□ -0.38
SDC1-202ENST00000381150 K7EQS6 105 aa12.66□□□□□ -0.38
SDC1-202ENST00000381150 BHLHE40O14503 412 aa12.66□□□□□ -0.38
SDC1-202ENST00000381150 PIN1P1O15428 100 aa12.66□□□□□ -0.38
SDC1-202ENST00000381150 RAB28P51157 221 aa12.66□□□□□ -0.38
SDC1-202ENST00000381150 POLR2GP62487 172 aaKnown RBP eCLIP12.66□□□□□ -0.38
SDC1-202ENST00000381150 PABPC1L2AQ5JQF8 200 aa12.66□□□□□ -0.38
SDC1-202ENST00000381150 OLFML2AQ68BL7 652 aa12.66□□□□□ -0.38
SDC1-202ENST00000381150 BAIAP2L2Q6UXY1 529 aa12.66□□□□□ -0.38
SDC1-202ENST00000381150 CD163Q86VB7 1156 aa12.66□□□□□ -0.38
SDC1-202ENST00000381150 OR5T2Q8NGG2 359 aa12.66□□□□□ -0.38
SDC1-202ENST00000381150 OR14A16Q8NHC5 309 aa12.66□□□□□ -0.38
SDC1-202ENST00000381150 HRH4Q9H3N8 390 aa12.66□□□□□ -0.38
SDC1-202ENST00000381150 KCNK6Q9Y257 313 aa12.66□□□□□ -0.38
SDC1-202ENST00000381150 MDC1Q14676 2089 aaKnown RBP12.66□□□□□ -0.38
SDC1-202ENST00000381150 OR52A4PA6NMU1 304 aa12.66□□□□□ -0.38
SDC1-202ENST00000381150 ITGA10O75578 1167 aa12.66□□□□□ -0.38
SDC1-202ENST00000381150 ADH1BP00325 375 aa12.66□□□□□ -0.38
SDC1-202ENST00000381150 FABP1P07148 127 aa12.66□□□□□ -0.38
SDC1-202ENST00000381150 ASGR2P07307 311 aa12.66□□□□□ -0.38
SDC1-202ENST00000381150 TRA2BP62995 288 aaKnown RBP12.66□□□□□ -0.38
SDC1-202ENST00000381150 SKP1P63208 163 aa12.66□□□□□ -0.38
SDC1-202ENST00000381150 MCATQ8IVS2 390 aaKnown RBP12.66□□□□□ -0.38
SDC1-202ENST00000381150 GTPBP8Q8N3Z3 284 aaPredicted RBP12.66□□□□□ -0.38
SDC1-202ENST00000381150 ZNF676Q8N7Q3 588 aa12.66□□□□□ -0.38
SDC1-202ENST00000381150 OR2L8Q8NGY9 312 aa12.66□□□□□ -0.38
SDC1-202ENST00000381150 MYADMQ96S97 322 aa12.66□□□□□ -0.38
SDC1-202ENST00000381150 TIMM29Q9BSF4 260 aa12.66□□□□□ -0.38
SDC1-202ENST00000381150 SRA1Q9HD15 236 aaKnown RBP12.66□□□□□ -0.38
SDC1-202ENST00000381150 MEPEQ9NQ76 525 aaPredicted RBP12.66□□□□□ -0.38
SDC1-202ENST00000381150 ST6GALNAC2Q9UJ37 374 aa12.66□□□□□ -0.38
SDC1-202ENST00000381150 OR5H14A6NHG9 310 aa12.65□□□□□ -0.38
SDC1-202ENST00000381150 OR2A4O95047 310 aa12.65□□□□□ -0.38
SDC1-202ENST00000381150 ZFPL1O95159 310 aa12.65□□□□□ -0.38
SDC1-202ENST00000381150 AMY2AP04746 511 aa12.65□□□□□ -0.38
SDC1-202ENST00000381150 CPN1P15169 458 aa12.65□□□□□ -0.38
SDC1-202ENST00000381150 GALP22466 123 aa12.65□□□□□ -0.38
SDC1-202ENST00000381150 CSF2RBP32927 897 aa12.65□□□□□ -0.38
SDC1-202ENST00000381150 BCL6P41182 706 aa12.65□□□□□ -0.38
SDC1-202ENST00000381150 NNATQ16517 81 aa12.65□□□□□ -0.38
SDC1-202ENST00000381150 PWWP2BQ6NUJ5 590 aa12.65□□□□□ -0.38
SDC1-202ENST00000381150 NAXDQ8IW45 347 aa12.65□□□□□ -0.38
SDC1-202ENST00000381150 SFT2D1Q8WV19 159 aa12.65□□□□□ -0.38
SDC1-202ENST00000381150 FGF14Q92915 247 aa12.65□□□□□ -0.38
SDC1-202ENST00000381150 C10orf90Q96M02 699 aa12.65□□□□□ -0.38
SDC1-202ENST00000381150 OR2A7Q96R45 310 aa12.65□□□□□ -0.38
SDC1-202ENST00000381150 ARHGDIGQ99819 225 aa12.65□□□□□ -0.38
SDC1-202ENST00000381150 KXD1Q9BQD3 176 aa12.65□□□□□ -0.38
SDC1-202ENST00000381150 CALML5Q9NZT1 146 aa12.65□□□□□ -0.38
SDC1-202ENST00000381150 RTTNQ86VV8 2226 aa12.65□□□□□ -0.38
SDC1-202ENST00000381150 C5orf51A6NDU8 294 aa12.65□□□□□ -0.38
SDC1-202ENST00000381150 TVP23AA6NH52 213 aa12.65□□□□□ -0.38
SDC1-202ENST00000381150 OR5K4A6NMS3 321 aa12.65□□□□□ -0.38
SDC1-202ENST00000381150 C4orf47A7E2U8 309 aa12.65□□□□□ -0.38
SDC1-202ENST00000381150 SSX5O60225 188 aa12.65□□□□□ -0.38
SDC1-202ENST00000381150 HIST1H1TP22492 207 aaPredicted RBP12.65□□□□□ -0.38
SDC1-202ENST00000381150 PEBP1P30086 187 aaKnown RBP12.65□□□□□ -0.38
SDC1-202ENST00000381150 SRSF3P84103 164 aaKnown RBP12.65□□□□□ -0.38
SDC1-202ENST00000381150 SQSTM1Q13501 440 aa12.65□□□□□ -0.38
SDC1-202ENST00000381150 DUSP5Q16690 384 aa12.65□□□□□ -0.38
SDC1-202ENST00000381150 COX18Q8N8Q8 333 aa12.65□□□□□ -0.38
SDC1-202ENST00000381150 ATG5Q9H1Y0 275 aa12.65□□□□□ -0.38
SDC1-202ENST00000381150 MTIF3Q9H2K0 278 aaKnown RBP12.65□□□□□ -0.38
SDC1-202ENST00000381150 PRDM7Q9NQW5 492 aa12.65□□□□□ -0.38
SDC1-202ENST00000381150 EMC3Q9P0I2 261 aa12.65□□□□□ -0.38
SDC1-202ENST00000381150 NDRG3Q9UGV2 375 aa12.65□□□□□ -0.38
SDC1-202ENST00000381150 TMEM272A0A1B0GTI8 110 aa12.64□□□□□ -0.39
SDC1-202ENST00000381150 OR6C76A6NM76 312 aa12.64□□□□□ -0.39
SDC1-202ENST00000381150 BLOC1S5-TXNDC5H3BN57 136 aa12.64□□□□□ -0.39
SDC1-202ENST00000381150 ABCD4O14678 606 aa12.64□□□□□ -0.39
SDC1-202ENST00000381150 GSTZ1O43708 216 aaPredicted RBP12.64□□□□□ -0.39
SDC1-202ENST00000381150 EIF3GO75821 320 aaKnown RBP eCLIP12.64□□□□□ -0.39
SDC1-202ENST00000381150 APODP05090 189 aa12.64□□□□□ -0.39
SDC1-202ENST00000381150 HTR2AP28223 471 aa12.64□□□□□ -0.39
SDC1-202ENST00000381150 PBX2P40425 430 aa12.64□□□□□ -0.39
SDC1-202ENST00000381150 ACTC1P68032 377 aa12.64□□□□□ -0.39
SDC1-202ENST00000381150 ACTA1P68133 377 aa12.64□□□□□ -0.39
SDC1-202ENST00000381150 SNTB1Q13884 538 aaKnown RBP12.64□□□□□ -0.39
SDC1-202ENST00000381150 PARM1Q6UWI2 310 aa12.64□□□□□ -0.39
SDC1-202ENST00000381150 FOXRED2Q8IWF2 684 aa12.64□□□□□ -0.39
SDC1-202ENST00000381150 PM20D2Q8IYS1 436 aa12.64□□□□□ -0.39
SDC1-202ENST00000381150 LNX2Q8N448 690 aa12.64□□□□□ -0.39
SDC1-202ENST00000381150 OR7G2Q8NG99 324 aa12.64□□□□□ -0.39
SDC1-202ENST00000381150 ACTRT3Q9BYD9 372 aa12.64□□□□□ -0.39
SDC1-202ENST00000381150 POLMQ9NP87 494 aaPredicted RBP12.64□□□□□ -0.39
SDC1-202ENST00000381150 PHPT1Q9NRX4 125 aaPredicted RBP12.64□□□□□ -0.39
SDC1-202ENST00000381150 C2orf42Q9NWW7 574 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms