RNA–Protein interactions for RNA: ENST00000378034.7

CKAP2-202, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-202ENST00000378034 STK11Q15831 433 aa11.67□□□□□ -0.54
CKAP2-202ENST00000378034 ZNF787Q6DD87 383 aa11.67□□□□□ -0.54
CKAP2-202ENST00000378034 HIST2H2BCQ6DN03 193 aa11.67□□□□□ -0.54
CKAP2-202ENST00000378034 LRRC75AQ8NAA5 344 aa11.67□□□□□ -0.54
CKAP2-202ENST00000378034 HSD17B8Q92506 261 aa11.67□□□□□ -0.54
CKAP2-202ENST00000378034 SLCO4A1Q96BD0 722 aa11.67□□□□□ -0.54
CKAP2-202ENST00000378034 RAB3IPQ96QF0 476 aaPredicted RBP11.67□□□□□ -0.54
CKAP2-202ENST00000378034 EMC6Q9BV81 110 aa11.67□□□□□ -0.54
CKAP2-202ENST00000378034 ARMC1Q9NVT9 282 aa11.67□□□□□ -0.54
CKAP2-202ENST00000378034 DNAJB9Q9UBS3 223 aa11.67□□□□□ -0.54
CKAP2-202ENST00000378034 SIGLEC7Q9Y286 467 aa11.67□□□□□ -0.54
CKAP2-202ENST00000378034 CIB4A0PJX0 185 aa11.66□□□□□ -0.54
CKAP2-202ENST00000378034 MCIDASD6RGH6 385 aa11.66□□□□□ -0.54
CKAP2-202ENST00000378034 CASKO14936 926 aa11.66□□□□□ -0.54
CKAP2-202ENST00000378034 UPK3AO75631 287 aa11.66□□□□□ -0.54
CKAP2-202ENST00000378034 LYZL6O75951 148 aa11.66□□□□□ -0.54
CKAP2-202ENST00000378034 NDUFB2O95178 105 aa11.66□□□□□ -0.54
CKAP2-202ENST00000378034 ITGA5P08648 1049 aa11.66□□□□□ -0.54
CKAP2-202ENST00000378034 SSTR2P30874 369 aa11.66□□□□□ -0.54
CKAP2-202ENST00000378034 GSSP48637 474 aa11.66□□□□□ -0.54
CKAP2-202ENST00000378034 CCNIQ14094 377 aa11.66□□□□□ -0.54
CKAP2-202ENST00000378034 ACKR1Q16570 336 aa11.66□□□□□ -0.54
CKAP2-202ENST00000378034 MICAQ29983 383 aa11.66□□□□□ -0.54
CKAP2-202ENST00000378034 FAM205BPQ63HN1 556 aa11.66□□□□□ -0.54
CKAP2-202ENST00000378034 HMBOX1Q6NT76 420 aa11.66□□□□□ -0.54
CKAP2-202ENST00000378034 ZNF771Q7L3S4 317 aaPredicted RBP11.66□□□□□ -0.54
CKAP2-202ENST00000378034 MEX3DQ86XN8 651 aaKnown RBP11.66□□□□□ -0.54
CKAP2-202ENST00000378034 C10orf67Q8IYJ2 551 aa11.66□□□□□ -0.54
CKAP2-202ENST00000378034 C17orf78Q8N4C9 275 aa11.66□□□□□ -0.54
CKAP2-202ENST00000378034 ASB10Q8WXI3 467 aa11.66□□□□□ -0.54
CKAP2-202ENST00000378034 ZNF566Q969W8 418 aa11.66□□□□□ -0.54
CKAP2-202ENST00000378034 S100PBPQ96BU1 408 aa11.66□□□□□ -0.54
CKAP2-202ENST00000378034 MUS81Q96NY9 551 aa11.66□□□□□ -0.54
CKAP2-202ENST00000378034 MCCC2Q9HCC0 563 aa11.66□□□□□ -0.54
CKAP2-202ENST00000378034 ADGRG4Q8IZF6 3080 aa11.66□□□□□ -0.54
CKAP2-202ENST00000378034 ARRDC5A6NEK1 342 aa11.65□□□□□ -0.54
CKAP2-202ENST00000378034 IGHG1P01857 330 aa11.65□□□□□ -0.54
CKAP2-202ENST00000378034 CSNK1A1P48729 337 aa11.65□□□□□ -0.54
CKAP2-202ENST00000378034 CTXN1P60606 82 aa11.65□□□□□ -0.54
CKAP2-202ENST00000378034 TSPAN31Q12999 210 aa11.65□□□□□ -0.54
CKAP2-202ENST00000378034 CAMK2DQ13557 499 aa11.65□□□□□ -0.54
CKAP2-202ENST00000378034 TIMM23BQ5SRD1 257 aa11.65□□□□□ -0.54
CKAP2-202ENST00000378034 ARMC4Q5T2S8 1044 aa11.65□□□□□ -0.54
CKAP2-202ENST00000378034 ZNF770Q6IQ21 691 aaPredicted RBP11.65□□□□□ -0.54
CKAP2-202ENST00000378034 PGBD2Q6P3X8 592 aa11.65□□□□□ -0.54
CKAP2-202ENST00000378034 OR6N1Q8NGY5 312 aa11.65□□□□□ -0.54
CKAP2-202ENST00000378034 TMEM54Q969K7 222 aa11.65□□□□□ -0.54
CKAP2-202ENST00000378034 GPX7Q96SL4 187 aaPredicted RBP11.65□□□□□ -0.54
CKAP2-202ENST00000378034 GPR35Q9HC97 309 aa11.65□□□□□ -0.54
CKAP2-202ENST00000378034 VNN3Q9NY84 501 aa11.65□□□□□ -0.54
CKAP2-202ENST00000378034 ANKHD1Q8IWZ3 2542 aaKnown RBP11.65□□□□□ -0.54
CKAP2-202ENST00000378034 DEAF1O75398 565 aaPredicted RBP11.65□□□□□ -0.55
CKAP2-202ENST00000378034 CD14P08571 375 aa11.65□□□□□ -0.55
CKAP2-202ENST00000378034 NR2C1P13056 603 aa11.65□□□□□ -0.55
CKAP2-202ENST00000378034 CRYGSP22914 178 aa11.65□□□□□ -0.55
CKAP2-202ENST00000378034 RPL4P36578 427 aaKnown RBP11.65□□□□□ -0.55
CKAP2-202ENST00000378034 ACTR3P61158 418 aa11.65□□□□□ -0.55
CKAP2-202ENST00000378034 RPL27P61353 136 aaKnown RBP11.65□□□□□ -0.55
CKAP2-202ENST00000378034 ROR2Q01974 943 aaKnown RBP11.65□□□□□ -0.55
CKAP2-202ENST00000378034 TSC22D1Q15714 1073 aa11.65□□□□□ -0.55
CKAP2-202ENST00000378034 GABRA6Q16445 453 aa11.65□□□□□ -0.55
CKAP2-202ENST00000378034 ANKRD34AQ69YU3 496 aa11.65□□□□□ -0.55
CKAP2-202ENST00000378034 SMARCD3Q6STE5 483 aa11.65□□□□□ -0.55
CKAP2-202ENST00000378034 ZNF295-AS1Q8N0V1 137 aa11.65□□□□□ -0.55
CKAP2-202ENST00000378034 FNDC8Q8TC99 324 aa11.65□□□□□ -0.55
CKAP2-202ENST00000378034 ALKBH3Q96Q83 286 aaPredicted RBP11.65□□□□□ -0.55
CKAP2-202ENST00000378034 GPA33Q99795 319 aa11.65□□□□□ -0.55
CKAP2-202ENST00000378034 DGCR6LQ9BY27 220 aa11.65□□□□□ -0.55
CKAP2-202ENST00000378034 MRPL13Q9BYD1 178 aaKnown RBP11.65□□□□□ -0.55
CKAP2-202ENST00000378034 MGAT4BQ9UQ53 548 aa11.65□□□□□ -0.55
CKAP2-202ENST00000378034 AP4S1Q9Y587 144 aa11.65□□□□□ -0.55
CKAP2-202ENST00000378034 U3KQV3 271 aa11.65□□□□□ -0.55
CKAP2-202ENST00000378034 A6NIZ1 184 aa11.64□□□□□ -0.55
CKAP2-202ENST00000378034 OR5H1A6NKK0 313 aa11.64□□□□□ -0.55
CKAP2-202ENST00000378034 RAD51DO75771 328 aa11.64□□□□□ -0.55
CKAP2-202ENST00000378034 PGA4P0DJD7 388 aa11.64□□□□□ -0.55
CKAP2-202ENST00000378034 PGA3P0DJD8 388 aa11.64□□□□□ -0.55
CKAP2-202ENST00000378034 FCGR1AP12314 374 aa11.64□□□□□ -0.55
CKAP2-202ENST00000378034 HOXB1P14653 301 aaPredicted RBP11.64□□□□□ -0.55
CKAP2-202ENST00000378034 ACADSP16219 412 aa11.64□□□□□ -0.55
CKAP2-202ENST00000378034 GSTM3P21266 225 aa11.64□□□□□ -0.55
CKAP2-202ENST00000378034 PAX7P23759 505 aa11.64□□□□□ -0.55
CKAP2-202ENST00000378034 ARHGDIAP52565 204 aa11.64□□□□□ -0.55
CKAP2-202ENST00000378034 RAP1BP61224 184 aa11.64□□□□□ -0.55
CKAP2-202ENST00000378034 RAP1AP62834 184 aa11.64□□□□□ -0.55
CKAP2-202ENST00000378034 LGALS3BPQ08380 585 aa11.64□□□□□ -0.55
CKAP2-202ENST00000378034 MELKQ14680 651 aa11.64□□□□□ -0.55
CKAP2-202ENST00000378034 HIST3H3Q16695 136 aa11.64□□□□□ -0.55
CKAP2-202ENST00000378034 CARD17Q5XLA6 110 aa11.64□□□□□ -0.55
CKAP2-202ENST00000378034 RPL13AP3Q6NVV1 102 aa11.64□□□□□ -0.55
CKAP2-202ENST00000378034 DPY19L2P2Q6ZN68 376 aa11.64□□□□□ -0.55
CKAP2-202ENST00000378034 LINGO2Q7L985 606 aa11.64□□□□□ -0.55
CKAP2-202ENST00000378034 MAGEE2Q8TD90 523 aaPredicted RBP11.64□□□□□ -0.55
CKAP2-202ENST00000378034 GIPC3Q8TF64 312 aa11.64□□□□□ -0.55
CKAP2-202ENST00000378034 MUCL1Q96DR8 90 aa11.64□□□□□ -0.55
CKAP2-202ENST00000378034 POLDIP3Q9BY77 421 aaKnown RBP11.64□□□□□ -0.55
CKAP2-202ENST00000378034 ULBP2Q9BZM5 246 aa11.64□□□□□ -0.55
CKAP2-202ENST00000378034 CRLF2Q9HC73 371 aa11.64□□□□□ -0.55
CKAP2-202ENST00000378034 NGBQ9NPG2 151 aa11.64□□□□□ -0.55
CKAP2-202ENST00000378034 OBP2BQ9NPH6 170 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms