RNA–Protein interactions for RNA: ENST00000367248.7

SYNE1-204, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-204ENST00000367248 PDGFBP01127 241 aaPredicted RBP10.63□□□□□ -0.71
SYNE1-204ENST00000367248 FAM157BP0CG42 384 aa10.63□□□□□ -0.71
SYNE1-204ENST00000367248 ZNF26P17031 533 aaPredicted RBP10.63□□□□□ -0.71
SYNE1-204ENST00000367248 S100A1P23297 94 aa10.63□□□□□ -0.71
SYNE1-204ENST00000367248 PIGAP37287 484 aa10.63□□□□□ -0.71
SYNE1-204ENST00000367248 PTH2RP49190 550 aa10.63□□□□□ -0.71
SYNE1-204ENST00000367248 ABHD4Q8TB40 342 aa10.63□□□□□ -0.71
SYNE1-204ENST00000367248 NT5CQ8TCD5 201 aa10.63□□□□□ -0.71
SYNE1-204ENST00000367248 Q96M85 177 aa10.63□□□□□ -0.71
SYNE1-204ENST00000367248 POLE4Q9NR33 117 aa10.63□□□□□ -0.71
SYNE1-204ENST00000367248 H7C2Y5 167 aa10.63□□□□□ -0.71
SYNE1-204ENST00000367248 BMP5P22003 454 aa10.63□□□□□ -0.71
SYNE1-204ENST00000367248 EIF3IQ13347 325 aaKnown RBP10.63□□□□□ -0.71
SYNE1-204ENST00000367248 PIWIL3Q7Z3Z3 882 aaKnown RBP10.63□□□□□ -0.71
SYNE1-204ENST00000367248 SMRP1Q8NCR6 262 aa10.63□□□□□ -0.71
SYNE1-204ENST00000367248 SIMC1Q8NDZ2 872 aa10.63□□□□□ -0.71
SYNE1-204ENST00000367248 OR4K15Q8NH41 348 aa10.63□□□□□ -0.71
SYNE1-204ENST00000367248 ZNF281Q9Y2X9 895 aa10.63□□□□□ -0.71
SYNE1-204ENST00000367248 CCDC163A0A0D9SF12 145 aa10.62□□□□□ -0.71
SYNE1-204ENST00000367248 SLC2A1P11166 492 aa10.62□□□□□ -0.71
SYNE1-204ENST00000367248 ADGRF3Q8IZF5 1079 aa10.62□□□□□ -0.71
SYNE1-204ENST00000367248 SCGB1C1Q8TD33 95 aa10.62□□□□□ -0.71
SYNE1-204ENST00000367248 INTS12Q96CB8 462 aaKnown RBP10.62□□□□□ -0.71
SYNE1-204ENST00000367248 ASB4Q9Y574 426 aa10.62□□□□□ -0.71
SYNE1-204ENST00000367248 CXCL13O43927 109 aa10.62□□□□□ -0.71
SYNE1-204ENST00000367248 OR7C1O76099 320 aaPredicted RBP10.62□□□□□ -0.71
SYNE1-204ENST00000367248 PPA1Q15181 289 aa10.62□□□□□ -0.71
SYNE1-204ENST00000367248 LAIR1Q6GTX8 287 aa10.62□□□□□ -0.71
SYNE1-204ENST00000367248 MEX3BQ6ZN04 569 aaKnown RBP10.62□□□□□ -0.71
SYNE1-204ENST00000367248 NDNFQ8TB73 568 aa10.62□□□□□ -0.71
SYNE1-204ENST00000367248 ZNF582Q96NG8 517 aaPredicted RBP10.62□□□□□ -0.71
SYNE1-204ENST00000367248 RAB9BQ9NP90 201 aa10.62□□□□□ -0.71
SYNE1-204ENST00000367248 QPCTLQ9NXS2 382 aa10.62□□□□□ -0.71
SYNE1-204ENST00000367248 FBXO4Q9UKT5 387 aa10.62□□□□□ -0.71
SYNE1-204ENST00000367248 DIMT1Q9UNQ2 313 aaKnown RBP10.62□□□□□ -0.71
SYNE1-204ENST00000367248 ALG5Q9Y673 324 aa10.62□□□□□ -0.71
SYNE1-204ENST00000367248 IGHV1OR21-1A0A087WYE8 117 aa10.62□□□□□ -0.71
SYNE1-204ENST00000367248 M0R082 166 aa10.62□□□□□ -0.71
SYNE1-204ENST00000367248 FXYD1O00168 92 aa10.62□□□□□ -0.71
SYNE1-204ENST00000367248 PIP5K1CO60331 668 aa10.62□□□□□ -0.71
SYNE1-204ENST00000367248 CREBL2O60519 120 aaPredicted RBP10.62□□□□□ -0.71
SYNE1-204ENST00000367248 ARF1P84077 181 aaKnown RBP10.62□□□□□ -0.71
SYNE1-204ENST00000367248 CSF3RQ99062 836 aa10.62□□□□□ -0.71
SYNE1-204ENST00000367248 TNFSF11O14788 317 aa10.62□□□□□ -0.71
SYNE1-204ENST00000367248 LYRM1O43325 122 aa10.62□□□□□ -0.71
SYNE1-204ENST00000367248 AGFG2O95081 481 aa10.62□□□□□ -0.71
SYNE1-204ENST00000367248 RAB3DO95716 219 aa10.62□□□□□ -0.71
SYNE1-204ENST00000367248 HOXC4P09017 264 aaPredicted RBP10.62□□□□□ -0.71
SYNE1-204ENST00000367248 PRPH2P23942 346 aa10.62□□□□□ -0.71
SYNE1-204ENST00000367248 PNLIPRP2P54317 469 aa10.62□□□□□ -0.71
SYNE1-204ENST00000367248 ESPNLQ6ZVH7 1005 aa10.62□□□□□ -0.71
SYNE1-204ENST00000367248 OR8H3Q8N146 312 aa10.62□□□□□ -0.71
SYNE1-204ENST00000367248 OR1J2Q8NGS2 313 aa10.62□□□□□ -0.71
SYNE1-204ENST00000367248 RHOXF1Q8NHV9 184 aa10.62□□□□□ -0.71
SYNE1-204ENST00000367248 WDR76Q9H967 626 aa10.62□□□□□ -0.71
SYNE1-204ENST00000367248 RASD1Q9Y272 281 aa10.62□□□□□ -0.71
SYNE1-204ENST00000367248 BORCS7-ASMTA0A0B4J1R7 106 aa10.62□□□□□ -0.71
SYNE1-204ENST00000367248 BTBD17A6NE02 478 aa10.62□□□□□ -0.71
SYNE1-204ENST00000367248 ATG12O94817 140 aa10.62□□□□□ -0.71
SYNE1-204ENST00000367248 FCGR2AP12318 317 aa10.62□□□□□ -0.71
SYNE1-204ENST00000367248 CLDN15P56746 228 aa10.62□□□□□ -0.71
SYNE1-204ENST00000367248 IKZF1Q13422 519 aa10.62□□□□□ -0.71
SYNE1-204ENST00000367248 TRA2AQ13595 282 aaKnown RBP eCLIP10.62□□□□□ -0.71
SYNE1-204ENST00000367248 OR1C1Q15619 314 aa10.62□□□□□ -0.71
SYNE1-204ENST00000367248 FBXO17Q96EF6 278 aa10.62□□□□□ -0.71
SYNE1-204ENST00000367248 TIMD4Q96H15 378 aa10.62□□□□□ -0.71
SYNE1-204ENST00000367248 PSORS1C1Q9UIG5 152 aa10.62□□□□□ -0.71
SYNE1-204ENST00000367248 MYH7BA7E2Y1 1941 aa10.62□□□□□ -0.71
SYNE1-204ENST00000367248 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.62□□□□□ -0.71
SYNE1-204ENST00000367248 SLC16A6O15403 523 aa10.62□□□□□ -0.71
SYNE1-204ENST00000367248 TNFSF14O43557 240 aa10.62□□□□□ -0.71
SYNE1-204ENST00000367248 PRAMEF4O60810 478 aa10.62□□□□□ -0.71
SYNE1-204ENST00000367248 ZXDAP98168 799 aa10.62□□□□□ -0.71
SYNE1-204ENST00000367248 TBC1D28Q2M2D7 210 aa10.62□□□□□ -0.71
SYNE1-204ENST00000367248 PCGF3Q3KNV8 242 aa10.62□□□□□ -0.71
SYNE1-204ENST00000367248 TBRG1Q3YBR2 411 aa10.62□□□□□ -0.71
SYNE1-204ENST00000367248 PSMF1Q92530 271 aa10.62□□□□□ -0.71
SYNE1-204ENST00000367248 GIMAP5Q96F15 307 aa10.62□□□□□ -0.71
SYNE1-204ENST00000367248 LAT2Q9GZY6 243 aa10.62□□□□□ -0.71
SYNE1-204ENST00000367248 GNG12Q9UBI6 72 aa10.62□□□□□ -0.71
SYNE1-204ENST00000367248 ZNF891A8MT65 544 aaPredicted RBP10.61□□□□□ -0.71
SYNE1-204ENST00000367248 MOSPD3O75425 235 aa10.61□□□□□ -0.71
SYNE1-204ENST00000367248 PIPP12273 146 aaPredicted RBP10.61□□□□□ -0.71
SYNE1-204ENST00000367248 MIB2Q96AX9 1013 aa10.61□□□□□ -0.71
SYNE1-204ENST00000367248 OR2S2Q9NQN1 319 aa10.61□□□□□ -0.71
SYNE1-204ENST00000367248 TNFRSF19Q9NS68 423 aa10.61□□□□□ -0.71
SYNE1-204ENST00000367248 GFOD1Q9NXC2 390 aa10.61□□□□□ -0.71
SYNE1-204ENST00000367248 P4HTMQ9NXG6 502 aa10.61□□□□□ -0.71
SYNE1-204ENST00000367248 IL1AP01583 271 aa10.61□□□□□ -0.71
SYNE1-204ENST00000367248 POU4F3Q15319 338 aa10.61□□□□□ -0.71
SYNE1-204ENST00000367248 TPRA1Q86W33 373 aa10.61□□□□□ -0.71
SYNE1-204ENST00000367248 ROBO4Q8WZ75 1007 aa10.61□□□□□ -0.71
SYNE1-204ENST00000367248 SOCS6O14544 535 aa10.61□□□□□ -0.71
SYNE1-204ENST00000367248 NXPH2O95156 264 aa10.61□□□□□ -0.71
SYNE1-204ENST00000367248 PRKACBP22694 351 aa10.61□□□□□ -0.71
SYNE1-204ENST00000367248 DUSP8Q13202 625 aa10.61□□□□□ -0.71
SYNE1-204ENST00000367248 Q499Y3 187 aa10.61□□□□□ -0.71
SYNE1-204ENST00000367248 MAML2Q8IZL2 1156 aaPredicted RBP10.61□□□□□ -0.71
SYNE1-204ENST00000367248 GCNT2Q8N0V5 402 aa10.61□□□□□ -0.71
SYNE1-204ENST00000367248 TRAPPC2LQ9UL33 140 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms