RNA–Protein interactions for RNA: ENST00000359867.7

CSNK1E-201, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-201ENST00000359867 FAPQ12884 760 aa12.58□□□□□ -0.4
CSNK1E-201ENST00000359867 SRSF6Q13247 344 aaKnown RBP12.58□□□□□ -0.4
CSNK1E-201ENST00000359867 IL18Q14116 193 aa12.58□□□□□ -0.4
CSNK1E-201ENST00000359867 PLBD1Q6P4A8 553 aa12.58□□□□□ -0.4
CSNK1E-201ENST00000359867 APOOLQ6UXV4 268 aa12.58□□□□□ -0.4
CSNK1E-201ENST00000359867 CPEB2Q7Z5Q1 589 aaKnown RBP12.58□□□□□ -0.4
CSNK1E-201ENST00000359867 ATG4DQ86TL0 474 aaPredicted RBP12.58□□□□□ -0.4
CSNK1E-201ENST00000359867 CDH24Q86UP0 819 aa12.58□□□□□ -0.4
CSNK1E-201ENST00000359867 BBS1Q8NFJ9 593 aa12.58□□□□□ -0.4
CSNK1E-201ENST00000359867 FAM122AQ96E09 287 aa12.58□□□□□ -0.4
CSNK1E-201ENST00000359867 ARHGAP9Q9BRR9 750 aa12.58□□□□□ -0.4
CSNK1E-201ENST00000359867 SEMA4CQ9C0C4 833 aa12.58□□□□□ -0.4
CSNK1E-201ENST00000359867 IFT22Q9H7X7 185 aa12.58□□□□□ -0.4
CSNK1E-201ENST00000359867 TNFRSF10DQ9UBN6 386 aa12.58□□□□□ -0.4
CSNK1E-201ENST00000359867 NOSIPQ9Y314 301 aaKnown RBP12.58□□□□□ -0.4
CSNK1E-201ENST00000359867 SLC22A31A6NKX4 558 aa12.57□□□□□ -0.4
CSNK1E-201ENST00000359867 ELOA3DA6NLF2 546 aaPredicted RBP12.57□□□□□ -0.4
CSNK1E-201ENST00000359867 ALG1L2C9J202 215 aa12.57□□□□□ -0.4
CSNK1E-201ENST00000359867 SOCS6O14544 535 aa12.57□□□□□ -0.4
CSNK1E-201ENST00000359867 DVL2O14641 736 aa12.57□□□□□ -0.4
CSNK1E-201ENST00000359867 TERTO14746 1132 aaKnown RBP12.57□□□□□ -0.4
CSNK1E-201ENST00000359867 EIF4E2O60573 245 aaKnown RBP12.57□□□□□ -0.4
CSNK1E-201ENST00000359867 ICOSLGO75144 302 aa12.57□□□□□ -0.4
CSNK1E-201ENST00000359867 IFNGP01579 166 aa12.57□□□□□ -0.4
CSNK1E-201ENST00000359867 CYC1P08574 325 aa12.57□□□□□ -0.4
CSNK1E-201ENST00000359867 SLC2A2P11168 524 aaPredicted RBP12.57□□□□□ -0.4
CSNK1E-201ENST00000359867 ZNF3P17036 446 aa12.57□□□□□ -0.4
CSNK1E-201ENST00000359867 HAAOP46952 286 aa12.57□□□□□ -0.4
CSNK1E-201ENST00000359867 GPR85P60893 370 aa12.57□□□□□ -0.4
CSNK1E-201ENST00000359867 ACSM1Q08AH1 577 aa12.57□□□□□ -0.4
CSNK1E-201ENST00000359867 TPBGQ13641 420 aa12.57□□□□□ -0.4
CSNK1E-201ENST00000359867 IL10RAQ13651 578 aa12.57□□□□□ -0.4
CSNK1E-201ENST00000359867 ELOA3BQ3SY89 546 aa12.57□□□□□ -0.4
CSNK1E-201ENST00000359867 LCN1P1Q5VSP4 162 aa12.57□□□□□ -0.4
CSNK1E-201ENST00000359867 TRIQKQ629K1 86 aa12.57□□□□□ -0.4
CSNK1E-201ENST00000359867 PLET1Q6UQ28 207 aa12.57□□□□□ -0.4
CSNK1E-201ENST00000359867 ZNF600Q6ZNG1 722 aa12.57□□□□□ -0.4
CSNK1E-201ENST00000359867 NUP54Q7Z3B4 507 aa12.57□□□□□ -0.4
CSNK1E-201ENST00000359867 DTX1Q86Y01 620 aa12.57□□□□□ -0.4
CSNK1E-201ENST00000359867 Q8N402 240 aa12.57□□□□□ -0.4
CSNK1E-201ENST00000359867 GATSQ8NAP1 163 aa12.57□□□□□ -0.4
CSNK1E-201ENST00000359867 ELOA3Q8NG57 546 aa12.57□□□□□ -0.4
CSNK1E-201ENST00000359867 OR52N1Q8NH53 320 aa12.57□□□□□ -0.4
CSNK1E-201ENST00000359867 LIPHQ8WWY8 451 aa12.57□□□□□ -0.4
CSNK1E-201ENST00000359867 MARVELD3Q96A59 401 aa12.57□□□□□ -0.4
CSNK1E-201ENST00000359867 SLC23A1Q9UHI7 598 aa12.57□□□□□ -0.4
CSNK1E-201ENST00000359867 PPIEQ9UNP9 301 aaKnown RBP12.57□□□□□ -0.4
CSNK1E-201ENST00000359867 ZNF337Q9Y3M9 751 aa12.57□□□□□ -0.4
CSNK1E-201ENST00000359867 J3QRE1 110 aa12.57□□□□□ -0.4
CSNK1E-201ENST00000359867 RAB40ALP0C0E4 278 aa12.57□□□□□ -0.4
CSNK1E-201ENST00000359867 PAICSP22234 425 aaKnown RBP12.57□□□□□ -0.4
CSNK1E-201ENST00000359867 ATP6V1E1P36543 226 aa12.57□□□□□ -0.4
CSNK1E-201ENST00000359867 MAP2K3P46734 347 aa12.57□□□□□ -0.4
CSNK1E-201ENST00000359867 RTP5Q14D33 572 aa12.57□□□□□ -0.4
CSNK1E-201ENST00000359867 BTBD16Q32M84 506 aa12.57□□□□□ -0.4
CSNK1E-201ENST00000359867 VASH2Q86V25 355 aa12.57□□□□□ -0.4
CSNK1E-201ENST00000359867 PRR22Q8IZ63 422 aa12.57□□□□□ -0.4
CSNK1E-201ENST00000359867 GDPD1Q8N9F7 314 aa12.57□□□□□ -0.4
CSNK1E-201ENST00000359867 ZNF485Q8NCK3 441 aa12.57□□□□□ -0.4
CSNK1E-201ENST00000359867 OR4F15Q8NGB8 312 aa12.57□□□□□ -0.4
CSNK1E-201ENST00000359867 KLHL21Q9UJP4 597 aa12.57□□□□□ -0.4
CSNK1E-201ENST00000359867 SF3B6Q9Y3B4 125 aaKnown RBP12.57□□□□□ -0.4
CSNK1E-201ENST00000359867 LOC400499M0QZD8 3231 aa12.56□□□□□ -0.4
CSNK1E-201ENST00000359867 SHISA3A0PJX4 238 aa12.56□□□□□ -0.4
CSNK1E-201ENST00000359867 FAM183AA6NL82 134 aa12.56□□□□□ -0.4
CSNK1E-201ENST00000359867 OIP5O43482 229 aa12.56□□□□□ -0.4
CSNK1E-201ENST00000359867 DXOO77932 396 aaKnown RBP12.56□□□□□ -0.4
CSNK1E-201ENST00000359867 PPP1R3DO95685 299 aa12.56□□□□□ -0.4
CSNK1E-201ENST00000359867 CBLN3Q6UW01 205 aa12.56□□□□□ -0.4
CSNK1E-201ENST00000359867 KLHL36Q8N4N3 616 aa12.56□□□□□ -0.4
CSNK1E-201ENST00000359867 SLC37A3Q8NCC5 494 aa12.56□□□□□ -0.4
CSNK1E-201ENST00000359867 C19orf18Q8NEA5 215 aa12.56□□□□□ -0.4
CSNK1E-201ENST00000359867 PTP4A1Q93096 173 aa12.56□□□□□ -0.4
CSNK1E-201ENST00000359867 LPAR4Q99677 370 aa12.56□□□□□ -0.4
CSNK1E-201ENST00000359867 PCSK5Q92824 1860 aa12.56□□□□□ -0.4
CSNK1E-201ENST00000359867 CD8B2A6NJW9 211 aa12.56□□□□□ -0.4
CSNK1E-201ENST00000359867 FAM25EA8MYX2 175 aa12.56□□□□□ -0.4
CSNK1E-201ENST00000359867 GNB5O14775 395 aa12.56□□□□□ -0.4
CSNK1E-201ENST00000359867 CD8BP10966 210 aa12.56□□□□□ -0.4
CSNK1E-201ENST00000359867 ABCD3P28288 659 aa12.56□□□□□ -0.4
CSNK1E-201ENST00000359867 NOS3P29474 1203 aa12.56□□□□□ -0.4
CSNK1E-201ENST00000359867 ZNF791Q3KP31 576 aaPredicted RBP12.56□□□□□ -0.4
CSNK1E-201ENST00000359867 IGF2-ASQ6U949 168 aa12.56□□□□□ -0.4
CSNK1E-201ENST00000359867 DPY19L2P2Q6ZN68 376 aa12.56□□□□□ -0.4
CSNK1E-201ENST00000359867 NFAM1Q8NET5 270 aaPredicted RBP12.56□□□□□ -0.4
CSNK1E-201ENST00000359867 OTULINQ96BN8 352 aa12.56□□□□□ -0.4
CSNK1E-201ENST00000359867 ZNF649Q9BS31 505 aa12.56□□□□□ -0.4
CSNK1E-201ENST00000359867 ADAM19Q9H013 955 aa12.56□□□□□ -0.4
CSNK1E-201ENST00000359867 ZC4H2Q9NQZ6 224 aa12.56□□□□□ -0.4
CSNK1E-201ENST00000359867 INPP5EQ9NRR6 644 aa12.56□□□□□ -0.4
CSNK1E-201ENST00000359867 HAO2Q9NYQ3 351 aa12.56□□□□□ -0.4
CSNK1E-201ENST00000359867 C19orf25Q9UFG5 118 aaPredicted RBP12.56□□□□□ -0.4
CSNK1E-201ENST00000359867 CHRNA9Q9UGM1 479 aa12.56□□□□□ -0.4
CSNK1E-201ENST00000359867 WASF3Q9UPY6 502 aa12.56□□□□□ -0.4
CSNK1E-201ENST00000359867 IGKV1D-42A0A075B6H8 117 aa12.55□□□□□ -0.4
CSNK1E-201ENST00000359867 CDC14CA4D256 554 aa12.55□□□□□ -0.4
CSNK1E-201ENST00000359867 CELA2AP08217 269 aa12.55□□□□□ -0.4
CSNK1E-201ENST00000359867 TRAPPC2P0DI81 140 aa12.55□□□□□ -0.4
CSNK1E-201ENST00000359867 TRAPPC2BP0DI82 140 aa12.55□□□□□ -0.4
CSNK1E-201ENST00000359867 CD82P27701 267 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms