RNA–Protein interactions for RNA: ENST00000358966.6

GGPS1-202, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GGPS1, Length 2,740 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-202ENST00000358966 HIST1H1CP16403 213 aaKnown RBP11.47□□□□□ -0.57
GGPS1-202ENST00000358966 ATP6V1E1P36543 226 aa11.47□□□□□ -0.57
GGPS1-202ENST00000358966 RPL4P36578 427 aaKnown RBP11.47□□□□□ -0.57
GGPS1-202ENST00000358966 ERVK-25P63136 954 aa11.47□□□□□ -0.57
GGPS1-202ENST00000358966 SPEM2Q0P670 501 aa11.47□□□□□ -0.57
GGPS1-202ENST00000358966 SPHARQ15513 63 aa11.47□□□□□ -0.57
GGPS1-202ENST00000358966 TIGD4Q8IY51 512 aa11.47□□□□□ -0.57
GGPS1-202ENST00000358966 LNX2Q8N448 690 aa11.47□□□□□ -0.57
GGPS1-202ENST00000358966 C9orf62Q8N4C0 152 aa11.47□□□□□ -0.57
GGPS1-202ENST00000358966 RFLNBQ8N5W9 214 aa11.47□□□□□ -0.57
GGPS1-202ENST00000358966 OR52E2Q8NGJ4 325 aa11.47□□□□□ -0.57
GGPS1-202ENST00000358966 OR11A1Q9GZK7 315 aa11.47□□□□□ -0.57
GGPS1-202ENST00000358966 RDH8Q9NYR8 311 aa11.47□□□□□ -0.57
GGPS1-202ENST00000358966 PISDQ9UG56 409 aa11.47□□□□□ -0.57
GGPS1-202ENST00000358966 ICAM5Q9UMF0 924 aa11.47□□□□□ -0.57
GGPS1-202ENST00000358966 VDAC3Q9Y277 283 aa11.47□□□□□ -0.57
GGPS1-202ENST00000358966 IER3IP1Q9Y5U9 82 aa11.47□□□□□ -0.57
GGPS1-202ENST00000358966 A0A0A6YYJ9 748 aa11.47□□□□□ -0.57
GGPS1-202ENST00000358966 A0A1W2PNU3 283 aaPredicted RBP11.47□□□□□ -0.57
GGPS1-202ENST00000358966 RPS10-NUDT3A0A1W2PQS6 291 aa11.47□□□□□ -0.57
GGPS1-202ENST00000358966 MAGEB4O15481 346 aaPredicted RBP11.47□□□□□ -0.57
GGPS1-202ENST00000358966 KLF7O75840 302 aaPredicted RBP11.47□□□□□ -0.57
GGPS1-202ENST00000358966 RAB36O95755 333 aa11.47□□□□□ -0.57
GGPS1-202ENST00000358966 PLATP00750 562 aa11.47□□□□□ -0.57
GGPS1-202ENST00000358966 FREM3P0C091 2139 aa11.47□□□□□ -0.57
GGPS1-202ENST00000358966 AQP2P41181 271 aa11.47□□□□□ -0.57
GGPS1-202ENST00000358966 TSPAN7P41732 249 aa11.47□□□□□ -0.57
GGPS1-202ENST00000358966 SLC26A5P58743 744 aa11.47□□□□□ -0.57
GGPS1-202ENST00000358966 FOXK1P85037 733 aa11.47□□□□□ -0.57
GGPS1-202ENST00000358966 IL11RAQ14626 422 aa11.47□□□□□ -0.57
GGPS1-202ENST00000358966 INSL4Q14641 139 aa11.47□□□□□ -0.57
GGPS1-202ENST00000358966 WBP2NLQ6ICG8 309 aa11.47□□□□□ -0.57
GGPS1-202ENST00000358966 ATCAYQ86WG3 371 aa11.47□□□□□ -0.57
GGPS1-202ENST00000358966 SLC37A3Q8NCC5 494 aa11.47□□□□□ -0.57
GGPS1-202ENST00000358966 OR10G3Q8NGC4 313 aa11.47□□□□□ -0.57
GGPS1-202ENST00000358966 CCDC32Q9BV29 185 aa11.47□□□□□ -0.57
GGPS1-202ENST00000358966 SLC19A3Q9BZV2 496 aa11.47□□□□□ -0.57
GGPS1-202ENST00000358966 SEMA4CQ9C0C4 833 aa11.47□□□□□ -0.57
GGPS1-202ENST00000358966 LDAHQ9H6V9 325 aa11.47□□□□□ -0.57
GGPS1-202ENST00000358966 EXOSC4Q9NPD3 245 aaKnown RBP11.47□□□□□ -0.57
GGPS1-202ENST00000358966 MBD2Q9UBB5 411 aa11.47□□□□□ -0.57
GGPS1-202ENST00000358966 ALG1L2C9J202 215 aa11.46□□□□□ -0.57
GGPS1-202ENST00000358966 STMND1H3BQB6 276 aa11.46□□□□□ -0.57
GGPS1-202ENST00000358966 H7C1C5 153 aa11.46□□□□□ -0.57
GGPS1-202ENST00000358966 HCN1O60741 890 aa11.46□□□□□ -0.57
GGPS1-202ENST00000358966 RCBTB2O95199 551 aa11.46□□□□□ -0.57
GGPS1-202ENST00000358966 OPN1LWP04000 364 aa11.46□□□□□ -0.57
GGPS1-202ENST00000358966 LIMS3P0CW19 117 aa11.46□□□□□ -0.57
GGPS1-202ENST00000358966 LIMS4P0CW20 117 aa11.46□□□□□ -0.57
GGPS1-202ENST00000358966 TGM4P49221 684 aa11.46□□□□□ -0.57
GGPS1-202ENST00000358966 LCN6P62502 163 aa11.46□□□□□ -0.57
GGPS1-202ENST00000358966 PLA2G2CQ5R387 149 aa11.46□□□□□ -0.57
GGPS1-202ENST00000358966 TRILQ7L0X0 811 aa11.46□□□□□ -0.57
GGPS1-202ENST00000358966 TMEM99Q8N816 258 aa11.46□□□□□ -0.57
GGPS1-202ENST00000358966 ATP6V1C2Q8NEY4 427 aa11.46□□□□□ -0.57
GGPS1-202ENST00000358966 FRMD6Q96NE9 622 aa11.46□□□□□ -0.57
GGPS1-202ENST00000358966 TSSK2Q96PF2 358 aa11.46□□□□□ -0.57
GGPS1-202ENST00000358966 NMNAT3Q96T66 252 aa11.46□□□□□ -0.57
GGPS1-202ENST00000358966 NXF2Q9GZY0 626 aaKnown RBP11.46□□□□□ -0.57
GGPS1-202ENST00000358966 MED11Q9P086 117 aa11.46□□□□□ -0.57
GGPS1-202ENST00000358966 LOXL2Q9Y4K0 774 aa11.46□□□□□ -0.57
GGPS1-202ENST00000358966 PEX16Q9Y5Y5 336 aa11.46□□□□□ -0.57
GGPS1-202ENST00000358966 MGAQ8IWI9 3026 aa11.46□□□□□ -0.57
GGPS1-202ENST00000358966 GVINP1Q7Z2Y8 2422 aa11.46□□□□□ -0.57
GGPS1-202ENST00000358966 TRBV23-1A0A0A0MS06 115 aa11.46□□□□□ -0.58
GGPS1-202ENST00000358966 TO15178 435 aa11.46□□□□□ -0.58
GGPS1-202ENST00000358966 FADS1O60427 444 aa11.46□□□□□ -0.58
GGPS1-202ENST00000358966 GPX5O75715 221 aa11.46□□□□□ -0.58
GGPS1-202ENST00000358966 KLK3P07288 261 aaPredicted RBP11.46□□□□□ -0.58
GGPS1-202ENST00000358966 GUSBP08236 651 aa11.46□□□□□ -0.58
GGPS1-202ENST00000358966 ZP3P21754 424 aa11.46□□□□□ -0.58
GGPS1-202ENST00000358966 ACP1P24666 158 aa11.46□□□□□ -0.58
GGPS1-202ENST00000358966 DCAF7P61962 342 aa11.46□□□□□ -0.58
GGPS1-202ENST00000358966 COL28A1Q2UY09 1125 aa11.46□□□□□ -0.58
GGPS1-202ENST00000358966 ZNF528Q3MIS6 628 aa11.46□□□□□ -0.58
GGPS1-202ENST00000358966 MEDAGQ5VYS4 303 aa11.46□□□□□ -0.58
GGPS1-202ENST00000358966 NIPAL3Q6P499 406 aa11.46□□□□□ -0.58
GGPS1-202ENST00000358966 ZNF367Q7RTV3 350 aa11.46□□□□□ -0.58
GGPS1-202ENST00000358966 CYP4Z2PQ8N1L4 340 aa11.46□□□□□ -0.58
GGPS1-202ENST00000358966 NANOGP1Q8N7R0 232 aa11.46□□□□□ -0.58
GGPS1-202ENST00000358966 FCGR1BQ92637 280 aa11.46□□□□□ -0.58
GGPS1-202ENST00000358966 KISS1RQ969F8 398 aaPredicted RBP11.46□□□□□ -0.58
GGPS1-202ENST00000358966 TAAR8Q969N4 342 aa11.46□□□□□ -0.58
GGPS1-202ENST00000358966 KATNB1Q9BVA0 655 aa11.46□□□□□ -0.58
GGPS1-202ENST00000358966 ISG20L2Q9H9L3 353 aaKnown RBP11.46□□□□□ -0.58
GGPS1-202ENST00000358966 GSN-AS1Q9NRJ2 163 aa11.46□□□□□ -0.58
GGPS1-202ENST00000358966 MRTO4Q9UKD2 239 aaKnown RBP11.46□□□□□ -0.58
GGPS1-202ENST00000358966 BAIAP2Q9UQB8 552 aa11.46□□□□□ -0.58
GGPS1-202ENST00000358966 MRPS14O60783 128 aaKnown RBP11.45□□□□□ -0.58
GGPS1-202ENST00000358966 RNF224P0DH78 156 aa11.45□□□□□ -0.58
GGPS1-202ENST00000358966 NUP62P37198 522 aaPredicted RBP11.45□□□□□ -0.58
GGPS1-202ENST00000358966 RBM34P42696 430 aaKnown RBP11.45□□□□□ -0.58
GGPS1-202ENST00000358966 SLC1A3P43003 542 aa11.45□□□□□ -0.58
GGPS1-202ENST00000358966 NCF4Q15080 339 aa11.45□□□□□ -0.58
GGPS1-202ENST00000358966 ZMAT1Q5H9K5 638 aa11.45□□□□□ -0.58
GGPS1-202ENST00000358966 PRAMEF20Q5VT98 475 aa11.45□□□□□ -0.58
GGPS1-202ENST00000358966 C5orf46Q6UWT4 87 aa11.45□□□□□ -0.58
GGPS1-202ENST00000358966 DHRS13Q6UX07 377 aa11.45□□□□□ -0.58
GGPS1-202ENST00000358966 ZNF782Q6ZMW2 699 aaPredicted RBP11.45□□□□□ -0.58
GGPS1-202ENST00000358966 FAM98AQ8NCA5 519 aaKnown RBP11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms