RNA–Protein interactions for RNA: ENST00000358028.8

NIPAL3-203, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 1,757 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-203ENST00000358028 DHFRP00374 187 aa12.97□□□□□ -0.33
NIPAL3-203ENST00000358028 MMP15P51511 669 aa12.97□□□□□ -0.33
NIPAL3-203ENST00000358028 EFR3AQ14156 821 aa12.97□□□□□ -0.33
NIPAL3-203ENST00000358028 ZNF74Q16587 644 aa12.97□□□□□ -0.33
NIPAL3-203ENST00000358028 PRAMEF17Q5VTA0 474 aa12.97□□□□□ -0.33
NIPAL3-203ENST00000358028 CBLN3Q6UW01 205 aa12.97□□□□□ -0.33
NIPAL3-203ENST00000358028 UNQ9370/PRO34162Q6UXP9 181 aa12.97□□□□□ -0.33
NIPAL3-203ENST00000358028 GLCCI1Q86VQ1 547 aa12.97□□□□□ -0.33
NIPAL3-203ENST00000358028 GPR135Q8IZ08 494 aa12.97□□□□□ -0.33
NIPAL3-203ENST00000358028 PRR22Q8IZ63 422 aa12.97□□□□□ -0.33
NIPAL3-203ENST00000358028 D2HGDHQ8N465 521 aa12.97□□□□□ -0.33
NIPAL3-203ENST00000358028 C10orf53Q8N6V4 93 aa12.97□□□□□ -0.33
NIPAL3-203ENST00000358028 ZPLD1Q8TCW7 415 aa12.97□□□□□ -0.33
NIPAL3-203ENST00000358028 RPS4Y2Q8TD47 263 aa12.97□□□□□ -0.33
NIPAL3-203ENST00000358028 HAVCR2Q8TDQ0 301 aa12.97□□□□□ -0.33
NIPAL3-203ENST00000358028 SNX33Q8WV41 574 aa12.97□□□□□ -0.33
NIPAL3-203ENST00000358028 ZNRF4Q8WWF5 429 aa12.97□□□□□ -0.33
NIPAL3-203ENST00000358028 GAL3ST4Q96RP7 486 aa12.97□□□□□ -0.33
NIPAL3-203ENST00000358028 NUDT22Q9BRQ3 303 aa12.97□□□□□ -0.33
NIPAL3-203ENST00000358028 NUDT9Q9BW91 350 aa12.97□□□□□ -0.33
NIPAL3-203ENST00000358028 ABCG5Q9H222 651 aa12.97□□□□□ -0.33
NIPAL3-203ENST00000358028 ZNF275Q9NSD4 429 aaPredicted RBP12.97□□□□□ -0.33
NIPAL3-203ENST00000358028 ACOXLQ9NUZ1 547 aa12.97□□□□□ -0.33
NIPAL3-203ENST00000358028 HIF3AQ9Y2N7 669 aa12.97□□□□□ -0.33
NIPAL3-203ENST00000358028 A0A1W2PRG6 482 aa12.97□□□□□ -0.33
NIPAL3-203ENST00000358028 TCRBV16S1A1N1A0A5B0 115 aa12.97□□□□□ -0.33
NIPAL3-203ENST00000358028 OR6C68A6NDL8 312 aa12.97□□□□□ -0.33
NIPAL3-203ENST00000358028 TMEM8BA6NDV4 472 aa12.97□□□□□ -0.33
NIPAL3-203ENST00000358028 CTDSPLO15194 276 aa12.97□□□□□ -0.33
NIPAL3-203ENST00000358028 GSTZ1O43708 216 aaPredicted RBP12.97□□□□□ -0.33
NIPAL3-203ENST00000358028 EPXP11678 715 aa12.97□□□□□ -0.33
NIPAL3-203ENST00000358028 APEHP13798 732 aaKnown RBP12.97□□□□□ -0.33
NIPAL3-203ENST00000358028 LCN1P31025 176 aa12.97□□□□□ -0.33
NIPAL3-203ENST00000358028 EFNA3P52797 238 aa12.97□□□□□ -0.33
NIPAL3-203ENST00000358028 DCAF7P61962 342 aa12.97□□□□□ -0.33
NIPAL3-203ENST00000358028 MRPL28Q13084 256 aaKnown RBP12.97□□□□□ -0.33
NIPAL3-203ENST00000358028 SLC25A35Q3KQZ1 300 aa12.97□□□□□ -0.33
NIPAL3-203ENST00000358028 IL20RBQ6UXL0 311 aa12.97□□□□□ -0.33
NIPAL3-203ENST00000358028 CDH24Q86UP0 819 aa12.97□□□□□ -0.33
NIPAL3-203ENST00000358028 GHDCQ8N2G8 530 aa12.97□□□□□ -0.33
NIPAL3-203ENST00000358028 LRRC75AQ8NAA5 344 aa12.97□□□□□ -0.33
NIPAL3-203ENST00000358028 C7orf57Q8NEG2 295 aa12.97□□□□□ -0.33
NIPAL3-203ENST00000358028 ADOQ96SZ5 270 aa12.97□□□□□ -0.33
NIPAL3-203ENST00000358028 LAT2Q9GZY6 243 aa12.97□□□□□ -0.33
NIPAL3-203ENST00000358028 DPAGT1Q9H3H5 408 aa12.97□□□□□ -0.33
NIPAL3-203ENST00000358028 ZNF304Q9HCX3 659 aa12.97□□□□□ -0.33
NIPAL3-203ENST00000358028 SEMA5BQ9P283 1151 aa12.97□□□□□ -0.33
NIPAL3-203ENST00000358028 CAMK2AQ9UQM7 478 aa12.97□□□□□ -0.33
NIPAL3-203ENST00000358028 NUBP2Q9Y5Y2 271 aa12.97□□□□□ -0.33
NIPAL3-203ENST00000358028 TEX13CA0A0J9YWL9 993 aa12.96□□□□□ -0.34
NIPAL3-203ENST00000358028 C7orf66A4D0T2 115 aa12.96□□□□□ -0.34
NIPAL3-203ENST00000358028 IMPA2O14732 288 aa12.96□□□□□ -0.34
NIPAL3-203ENST00000358028 PDCD5O14737 125 aa12.96□□□□□ -0.34
NIPAL3-203ENST00000358028 MAGEB4O15481 346 aaPredicted RBP12.96□□□□□ -0.34
NIPAL3-203ENST00000358028 EEF1E1O43324 174 aaKnown RBP12.96□□□□□ -0.34
NIPAL3-203ENST00000358028 SELENOFO60613 162 aa12.96□□□□□ -0.34
NIPAL3-203ENST00000358028 ICOSLGO75144 302 aa12.96□□□□□ -0.34
NIPAL3-203ENST00000358028 PAHP00439 452 aa12.96□□□□□ -0.34
NIPAL3-203ENST00000358028 FOLR1P15328 257 aa12.96□□□□□ -0.34
NIPAL3-203ENST00000358028 MST1P26927 711 aa12.96□□□□□ -0.34
NIPAL3-203ENST00000358028 AQP2P41181 271 aa12.96□□□□□ -0.34
NIPAL3-203ENST00000358028 AGFG1P52594 562 aaKnown RBP12.96□□□□□ -0.34
NIPAL3-203ENST00000358028 SLC25A1P53007 311 aa12.96□□□□□ -0.34
NIPAL3-203ENST00000358028 RAG2P55895 527 aa12.96□□□□□ -0.34
NIPAL3-203ENST00000358028 EBPQ15125 230 aaKnown RBP12.96□□□□□ -0.34
NIPAL3-203ENST00000358028 NTRK2Q16620 822 aa12.96□□□□□ -0.34
NIPAL3-203ENST00000358028 LEG1Q6P5S2 330 aa12.96□□□□□ -0.34
NIPAL3-203ENST00000358028 PRSS42Q7Z5A4 293 aa12.96□□□□□ -0.34
NIPAL3-203ENST00000358028 OR13C5Q8NGS8 318 aa12.96□□□□□ -0.34
NIPAL3-203ENST00000358028 SLC41A2Q96JW4 573 aa12.96□□□□□ -0.34
NIPAL3-203ENST00000358028 MOGAT1Q96PD6 335 aa12.96□□□□□ -0.34
NIPAL3-203ENST00000358028 ABHD1Q96SE0 405 aa12.96□□□□□ -0.34
NIPAL3-203ENST00000358028 BEX2Q9BXY8 128 aa12.96□□□□□ -0.34
NIPAL3-203ENST00000358028 NDEL1Q9GZM8 345 aa12.96□□□□□ -0.34
NIPAL3-203ENST00000358028 MMP25Q9NPA2 562 aa12.96□□□□□ -0.34
NIPAL3-203ENST00000358028 SPATA2Q9UM82 520 aa12.96□□□□□ -0.34
NIPAL3-203ENST00000358028 COPS3Q9UNS2 423 aa12.96□□□□□ -0.34
NIPAL3-203ENST00000358028 TRBV2A0A0J9YWF9 115 aa12.95□□□□□ -0.34
NIPAL3-203ENST00000358028 BLOC1S5-TXNDC5H3BN57 136 aa12.95□□□□□ -0.34
NIPAL3-203ENST00000358028 LANCL1O43813 399 aa12.95□□□□□ -0.34
NIPAL3-203ENST00000358028 GLCEO94923 617 aa12.95□□□□□ -0.34
NIPAL3-203ENST00000358028 TFPIP10646 304 aa12.95□□□□□ -0.34
NIPAL3-203ENST00000358028 EDNRAP25101 427 aa12.95□□□□□ -0.34
NIPAL3-203ENST00000358028 IL12BP29460 328 aa12.95□□□□□ -0.34
NIPAL3-203ENST00000358028 SLC6A8P48029 635 aa12.95□□□□□ -0.34
NIPAL3-203ENST00000358028 RPS11P62280 158 aaKnown RBP eCLIP12.95□□□□□ -0.34
NIPAL3-203ENST00000358028 GPLD1P80108 840 aa12.95□□□□□ -0.34
NIPAL3-203ENST00000358028 CAMK2BQ13554 666 aa12.95□□□□□ -0.34
NIPAL3-203ENST00000358028 VWA2Q5GFL6 755 aa12.95□□□□□ -0.34
NIPAL3-203ENST00000358028 CEP78Q5JTW2 689 aa12.95□□□□□ -0.34
NIPAL3-203ENST00000358028 ARHGAP40Q5TG30 622 aa12.95□□□□□ -0.34
NIPAL3-203ENST00000358028 HLA-DQA1Q5Y7H0 255 aa12.95□□□□□ -0.34
NIPAL3-203ENST00000358028 SLC6A19Q695T7 634 aa12.95□□□□□ -0.34
NIPAL3-203ENST00000358028 ZNF574Q6ZN55 896 aaPredicted RBP12.95□□□□□ -0.34
NIPAL3-203ENST00000358028 ASB18Q6ZVZ8 466 aa12.95□□□□□ -0.34
NIPAL3-203ENST00000358028 NUP54Q7Z3B4 507 aa12.95□□□□□ -0.34
NIPAL3-203ENST00000358028 KCTD20Q7Z5Y7 419 aa12.95□□□□□ -0.34
NIPAL3-203ENST00000358028 JAZF1Q86VZ6 243 aa12.95□□□□□ -0.34
NIPAL3-203ENST00000358028 C9orf40Q8IXQ3 194 aa12.95□□□□□ -0.34
NIPAL3-203ENST00000358028 OR6K6Q8NGW6 343 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms