RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 CNTN4Q8IWV2 1026 aa16.01■□□□□ 0.15
COL27A1-201ENST00000356083 CORO2AQ92828 525 aa16.01■□□□□ 0.15
COL27A1-201ENST00000356083 ZNF778Q96MU6 729 aa16.01■□□□□ 0.15
COL27A1-201ENST00000356083 VPS25Q9BRG1 176 aa16.01■□□□□ 0.15
COL27A1-201ENST00000356083 IER2Q9BTL4 223 aa16.01■□□□□ 0.15
COL27A1-201ENST00000356083 PECRQ9BY49 303 aa16.01■□□□□ 0.15
COL27A1-201ENST00000356083 FAM186AA6NE01 2351 aa16.01■□□□□ 0.15
COL27A1-201ENST00000356083 TMEM72A0PK05 275 aa16.01■□□□□ 0.15
COL27A1-201ENST00000356083 SLC22A23A1A5C7 686 aa16.01■□□□□ 0.15
COL27A1-201ENST00000356083 ARPC3O15145 178 aa16.01■□□□□ 0.15
COL27A1-201ENST00000356083 OR7C2O60412 319 aa16.01■□□□□ 0.15
COL27A1-201ENST00000356083 SEMG1P04279 462 aa16.01■□□□□ 0.15
COL27A1-201ENST00000356083 FAM157BP0CG42 384 aa16.01■□□□□ 0.15
COL27A1-201ENST00000356083 RNF224P0DH78 156 aa16.01■□□□□ 0.15
COL27A1-201ENST00000356083 INHBCP55103 352 aa16.01■□□□□ 0.15
COL27A1-201ENST00000356083 FBXO46Q6PJ61 603 aaPredicted RBP16.01■□□□□ 0.15
COL27A1-201ENST00000356083 FIBINQ8TAL6 211 aa16.01■□□□□ 0.15
COL27A1-201ENST00000356083 OR51J1Q9H342 316 aa16.01■□□□□ 0.15
COL27A1-201ENST00000356083 NXT1Q9UKK6 140 aaKnown RBP16.01■□□□□ 0.15
COL27A1-201ENST00000356083 IFT172Q9UG01 1749 aa16.01■□□□□ 0.15
COL27A1-201ENST00000356083 UBCP0CG48 685 aaKnown RBP16.01■□□□□ 0.15
COL27A1-201ENST00000356083 PROZP22891 400 aa16.01■□□□□ 0.15
COL27A1-201ENST00000356083 Q6ZTK2 550 aa16.01■□□□□ 0.15
COL27A1-201ENST00000356083 KDF1Q8NAX2 398 aaPredicted RBP16.01■□□□□ 0.15
COL27A1-201ENST00000356083 TGIF2Q9GZN2 237 aa16.01■□□□□ 0.15
COL27A1-201ENST00000356083 SLC35D1Q9NTN3 355 aa16.01■□□□□ 0.15
COL27A1-201ENST00000356083 MKS1Q9NXB0 559 aa16.01■□□□□ 0.15
COL27A1-201ENST00000356083 DBX1A6NMT0 343 aa16.01■□□□□ 0.15
COL27A1-201ENST00000356083 HLA-HP01893 362 aa16.01■□□□□ 0.15
COL27A1-201ENST00000356083 TAS2R19P59542 299 aa16.01■□□□□ 0.15
COL27A1-201ENST00000356083 ANKRD16Q6P6B7 361 aa16.01■□□□□ 0.15
COL27A1-201ENST00000356083 C17orf107Q6ZR85 190 aa16.01■□□□□ 0.15
COL27A1-201ENST00000356083 OR52N5Q8NH56 324 aa16.01■□□□□ 0.15
COL27A1-201ENST00000356083 DNASE2O00115 360 aaPredicted RBP16■□□□□ 0.15
COL27A1-201ENST00000356083 ZNF264O43296 627 aa16■□□□□ 0.15
COL27A1-201ENST00000356083 ARSDP51689 593 aa16■□□□□ 0.15
COL27A1-201ENST00000356083 KIR2DS3Q14952 304 aa16■□□□□ 0.15
COL27A1-201ENST00000356083 C11orf40Q8WZ69 217 aa16■□□□□ 0.15
COL27A1-201ENST00000356083 NAP1L6A6NFF2 107 aa16■□□□□ 0.15
COL27A1-201ENST00000356083 MST1RQ04912 1400 aa16■□□□□ 0.15
COL27A1-201ENST00000356083 SNTB1Q13884 538 aaKnown RBP16■□□□□ 0.15
COL27A1-201ENST00000356083 SOX7Q9BT81 388 aa16■□□□□ 0.15
COL27A1-201ENST00000356083 LHPPQ9H008 270 aa16■□□□□ 0.15
COL27A1-201ENST00000356083 POPDC3Q9HBV1 291 aa16■□□□□ 0.15
COL27A1-201ENST00000356083 FAM212BQ9NTI7 297 aaPredicted RBP16■□□□□ 0.15
COL27A1-201ENST00000356083 STYXL1Q9Y6J8 313 aa16■□□□□ 0.15
COL27A1-201ENST00000356083 ENPP4Q9Y6X5 453 aa16■□□□□ 0.15
COL27A1-201ENST00000356083 PLIN4Q96Q06 1357 aa16■□□□□ 0.15
COL27A1-201ENST00000356083 NPIPB15A6NHN6 443 aaPredicted RBP16■□□□□ 0.15
COL27A1-201ENST00000356083 LY86O95711 162 aa16■□□□□ 0.15
COL27A1-201ENST00000356083 SELENOWP63302 87 aa16■□□□□ 0.15
COL27A1-201ENST00000356083 ZNF425Q6IV72 752 aa16■□□□□ 0.15
COL27A1-201ENST00000356083 ASB4Q9Y574 426 aa16■□□□□ 0.15
COL27A1-201ENST00000356083 RGS11O94810 467 aa16■□□□□ 0.15
COL27A1-201ENST00000356083 SLC6A19Q695T7 634 aa16■□□□□ 0.15
COL27A1-201ENST00000356083 YRDCQ86U90 279 aaKnown RBP16■□□□□ 0.15
COL27A1-201ENST00000356083 MDGA1Q8NFP4 955 aa16■□□□□ 0.15
COL27A1-201ENST00000356083 OR13C2Q8NGS9 318 aa16■□□□□ 0.15
COL27A1-201ENST00000356083 ST6GALNAC4Q9H4F1 302 aa16■□□□□ 0.15
COL27A1-201ENST00000356083 CEP250Q9BV73 2442 aa16■□□□□ 0.15
COL27A1-201ENST00000356083 KIR2DS5A0A0G2JLQ3 304 aa16■□□□□ 0.15
COL27A1-201ENST00000356083 A0A0G2JNG1 304 aa16■□□□□ 0.15
COL27A1-201ENST00000356083 KIR2DS3K7RE56 304 aa16■□□□□ 0.15
COL27A1-201ENST00000356083 HMGN2P05204 90 aaKnown RBP16■□□□□ 0.15
COL27A1-201ENST00000356083 MMP12P39900 470 aa16■□□□□ 0.15
COL27A1-201ENST00000356083 KIR2DS5Q14953 304 aa16■□□□□ 0.15
COL27A1-201ENST00000356083 KCND1Q9NSA2 647 aa16■□□□□ 0.15
COL27A1-201ENST00000356083 OR51A4Q8NGJ6 313 aa16■□□□□ 0.15
COL27A1-201ENST00000356083 OR51A2Q8NGJ7 313 aa16■□□□□ 0.15
COL27A1-201ENST00000356083 MCOLN1Q9GZU1 580 aa16■□□□□ 0.15
COL27A1-201ENST00000356083 OR8G3PP0DMU2 310 aa15.99■□□□□ 0.15
COL27A1-201ENST00000356083 CYBAP13498 195 aa15.99■□□□□ 0.15
COL27A1-201ENST00000356083 SORDQ00796 357 aa15.99■□□□□ 0.15
COL27A1-201ENST00000356083 DEFA6Q01524 100 aa15.99■□□□□ 0.15
COL27A1-201ENST00000356083 BTN1A1Q13410 526 aa15.99■□□□□ 0.15
COL27A1-201ENST00000356083 RTL6Q6ICC9 239 aa15.99■□□□□ 0.15
COL27A1-201ENST00000356083 SYT9Q86SS6 491 aa15.99■□□□□ 0.15
COL27A1-201ENST00000356083 SLC7A5P1Q8MH63 180 aa15.99■□□□□ 0.15
COL27A1-201ENST00000356083 SLC35E1Q96K37 410 aa15.99■□□□□ 0.15
COL27A1-201ENST00000356083 RAB6CQ9H0N0 254 aa15.99■□□□□ 0.15
COL27A1-201ENST00000356083 ENPP5Q9UJA9 477 aa15.99■□□□□ 0.15
COL27A1-201ENST00000356083 SPP1P10451 314 aa15.99■□□□□ 0.15
COL27A1-201ENST00000356083 NPY1RP25929 384 aa15.99■□□□□ 0.15
COL27A1-201ENST00000356083 VEGFBP49765 207 aa15.99■□□□□ 0.15
COL27A1-201ENST00000356083 RGNQ15493 299 aa15.99■□□□□ 0.15
COL27A1-201ENST00000356083 DNAJC5GQ8N7S2 189 aa15.99■□□□□ 0.15
COL27A1-201ENST00000356083 PRAMEF25A6NGN4 478 aa15.99■□□□□ 0.15
COL27A1-201ENST00000356083 J3KTA2 159 aa15.99■□□□□ 0.15
COL27A1-201ENST00000356083 SNAPINO95295 136 aa15.99■□□□□ 0.15
COL27A1-201ENST00000356083 PENKP01210 267 aaPredicted RBP15.99■□□□□ 0.15
COL27A1-201ENST00000356083 SDHBP21912 280 aa15.99■□□□□ 0.15
COL27A1-201ENST00000356083 RFC3P40938 356 aa15.99■□□□□ 0.15
COL27A1-201ENST00000356083 SLC6A11P48066 632 aa15.99■□□□□ 0.15
COL27A1-201ENST00000356083 PRAMEF5Q5TYX0 476 aa15.99■□□□□ 0.15
COL27A1-201ENST00000356083 PRAMEF6Q5VXH4 476 aa15.99■□□□□ 0.15
COL27A1-201ENST00000356083 FMN2Q9NZ56 1722 aa15.99■□□□□ 0.15
COL27A1-201ENST00000356083 P2RY10O00398 339 aa15.99■□□□□ 0.15
COL27A1-201ENST00000356083 GPLD1P80108 840 aa15.99■□□□□ 0.15
COL27A1-201ENST00000356083 C17orf67Q0P5P2 114 aa15.99■□□□□ 0.15
COL27A1-201ENST00000356083 RTL8BQ17RB0 113 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms