RNA–Protein interactions for RNA: ENST00000351487.5

UPF3A-201, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3A, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-201ENST00000351487 C9orf62Q8N4C0 152 aa20.06■□□□□ 0.8
UPF3A-201ENST00000351487 OR6N2Q8NGY6 317 aa20.06■□□□□ 0.8
UPF3A-201ENST00000351487 RAB40AQ8WXH6 277 aa20.06■□□□□ 0.8
UPF3A-201ENST00000351487 TRAV36DV7A0A075B6V5 113 aa20.05■□□□□ 0.8
UPF3A-201ENST00000351487 TVP23AA6NH52 213 aa20.05■□□□□ 0.8
UPF3A-201ENST00000351487 OR4C45A6NMZ5 311 aa20.05■□□□□ 0.8
UPF3A-201ENST00000351487 ZNF432O94892 652 aa20.05■□□□□ 0.8
UPF3A-201ENST00000351487 ALX3O95076 343 aa20.05■□□□□ 0.8
UPF3A-201ENST00000351487 ANXA3P12429 323 aa20.05■□□□□ 0.8
UPF3A-201ENST00000351487 PRKCAP17252 672 aa20.05■□□□□ 0.8
UPF3A-201ENST00000351487 CXCR1P25024 350 aa20.05■□□□□ 0.8
UPF3A-201ENST00000351487 ANGPT1Q15389 498 aa20.05■□□□□ 0.8
UPF3A-201ENST00000351487 OR1L3Q8NH93 324 aa20.05■□□□□ 0.8
UPF3A-201ENST00000351487 DAZLQ92904 295 aaKnown RBP20.05■□□□□ 0.8
UPF3A-201ENST00000351487 NRSN2Q9GZP1 204 aa20.05■□□□□ 0.8
UPF3A-201ENST00000351487 SYT4Q9H2B2 425 aa20.05■□□□□ 0.8
UPF3A-201ENST00000351487 OR5V1Q9UGF6 321 aa20.05■□□□□ 0.8
UPF3A-201ENST00000351487 HSPB11Q9Y547 144 aa20.05■□□□□ 0.8
UPF3A-201ENST00000351487 ETV7Q9Y603 341 aa20.05■□□□□ 0.8
UPF3A-201ENST00000351487 PHYHO14832 338 aa20.04■□□□□ 0.8
UPF3A-201ENST00000351487 AKR7A2O43488 359 aa20.04■□□□□ 0.8
UPF3A-201ENST00000351487 SDC3O75056 442 aa20.04■□□□□ 0.8
UPF3A-201ENST00000351487 ZNF254O75437 659 aa20.04■□□□□ 0.8
UPF3A-201ENST00000351487 ECDO95905 644 aaPredicted RBP20.04■□□□□ 0.8
UPF3A-201ENST00000351487 ZP2Q05996 745 aa20.04■□□□□ 0.8
UPF3A-201ENST00000351487 TOMM34Q15785 309 aaPredicted RBP20.04■□□□□ 0.8
UPF3A-201ENST00000351487 OR2G2Q8NGZ5 317 aa20.04■□□□□ 0.8
UPF3A-201ENST00000351487 CCDC74AQ96AQ1 378 aa20.04■□□□□ 0.8
UPF3A-201ENST00000351487 INTS14Q96SY0 518 aa20.04■□□□□ 0.8
UPF3A-201ENST00000351487 UCKL1Q9NWZ5 548 aa20.04■□□□□ 0.8
UPF3A-201ENST00000351487 TAS2R5Q9NYW4 299 aa20.04■□□□□ 0.8
UPF3A-201ENST00000351487 PTTG3PQ9NZH4 202 aa20.04■□□□□ 0.8
UPF3A-201ENST00000351487 FER1L5A0AVI2 2057 aa20.04■□□□□ 0.8
UPF3A-201ENST00000351487 EYSQ5T1H1 3165 aa20.04■□□□□ 0.8
UPF3A-201ENST00000351487 CPAMD8Q8IZJ3 1885 aa20.04■□□□□ 0.8
UPF3A-201ENST00000351487 SPAG17Q6Q759 2223 aa20.04■□□□□ 0.8
UPF3A-201ENST00000351487 IGHV1OR21-1A0A087WYE8 117 aa20.04■□□□□ 0.8
UPF3A-201ENST00000351487 ZNF593O00488 134 aaPredicted RBP20.04■□□□□ 0.8
UPF3A-201ENST00000351487 NDUFB5O43674 189 aa20.04■□□□□ 0.8
UPF3A-201ENST00000351487 MT-ATP6P00846 226 aa20.04■□□□□ 0.8
UPF3A-201ENST00000351487 RAF1P04049 648 aa20.04■□□□□ 0.8
UPF3A-201ENST00000351487 ADRA2CP18825 462 aa20.04■□□□□ 0.8
UPF3A-201ENST00000351487 MNDAP41218 407 aa20.04■□□□□ 0.8
UPF3A-201ENST00000351487 NR0B1P51843 470 aaKnown RBP20.04■□□□□ 0.8
UPF3A-201ENST00000351487 MRPS10P82664 201 aaKnown RBP20.04■□□□□ 0.8
UPF3A-201ENST00000351487 HLA-DQA1Q5Y7H0 255 aa20.04■□□□□ 0.8
UPF3A-201ENST00000351487 MTFR2Q6P444 385 aa20.04■□□□□ 0.8
UPF3A-201ENST00000351487 FGD2Q7Z6J4 655 aa20.04■□□□□ 0.8
UPF3A-201ENST00000351487 MARCH3Q86UD3 253 aa20.04■□□□□ 0.8
UPF3A-201ENST00000351487 LRRTM1Q86UE6 522 aa20.04■□□□□ 0.8
UPF3A-201ENST00000351487 D2HGDHQ8N465 521 aa20.04■□□□□ 0.8
UPF3A-201ENST00000351487 HAVCR1Q96D42 359 aa20.04■□□□□ 0.8
UPF3A-201ENST00000351487 WWTR1Q9GZV5 400 aa20.04■□□□□ 0.8
UPF3A-201ENST00000351487 EMC3Q9P0I2 261 aa20.04■□□□□ 0.8
UPF3A-201ENST00000351487 KLHL9Q9P2J3 617 aa20.04■□□□□ 0.8
UPF3A-201ENST00000351487 IKZF2Q9UKS7 526 aa20.04■□□□□ 0.8
UPF3A-201ENST00000351487 ING4Q9UNL4 249 aa20.04■□□□□ 0.8
UPF3A-201ENST00000351487 FOXJ3Q9UPW0 622 aa20.04■□□□□ 0.8
UPF3A-201ENST00000351487 CEP192Q8TEP8 1941 aa20.04■□□□□ 0.8
UPF3A-201ENST00000351487 TRBV5-7A0A0A0MS05 114 aa20.03■□□□□ 0.8
UPF3A-201ENST00000351487 CDC14CA4D256 554 aa20.03■□□□□ 0.8
UPF3A-201ENST00000351487 TMEM212A6NML5 194 aa20.03■□□□□ 0.8
UPF3A-201ENST00000351487 MBTPS2O43462 519 aa20.03■□□□□ 0.8
UPF3A-201ENST00000351487 PGCP20142 388 aa20.03■□□□□ 0.8
UPF3A-201ENST00000351487 FBLP22087 321 aaKnown RBP20.03■□□□□ 0.8
UPF3A-201ENST00000351487 PTH2RP49190 550 aa20.03■□□□□ 0.8
UPF3A-201ENST00000351487 ARL4DP49703 201 aa20.03■□□□□ 0.8
UPF3A-201ENST00000351487 CCR9P51686 369 aa20.03■□□□□ 0.8
UPF3A-201ENST00000351487 CLDN12P56749 244 aa20.03■□□□□ 0.8
UPF3A-201ENST00000351487 PLCXD2Q0VAA5 305 aa20.03■□□□□ 0.8
UPF3A-201ENST00000351487 TDGQ13569 410 aa20.03■□□□□ 0.8
UPF3A-201ENST00000351487 DPY19L4Q7Z388 723 aa20.03■□□□□ 0.8
UPF3A-201ENST00000351487 OR52I2Q8NH67 350 aa20.03■□□□□ 0.8
UPF3A-201ENST00000351487 SYNPRQ8TBG9 265 aa20.03■□□□□ 0.8
UPF3A-201ENST00000351487 GIMAP1Q8WWP7 306 aa20.03■□□□□ 0.8
UPF3A-201ENST00000351487 MIB2Q96AX9 1013 aa20.03■□□□□ 0.8
UPF3A-201ENST00000351487 S100A16Q96FQ6 103 aaKnown RBP20.03■□□□□ 0.8
UPF3A-201ENST00000351487 RANBP3Q9H6Z4 567 aaPredicted RBP20.03■□□□□ 0.8
UPF3A-201ENST00000351487 ZFP64Q9NPA5 681 aa20.03■□□□□ 0.8
UPF3A-201ENST00000351487 SEMA5BQ9P283 1151 aa20.03■□□□□ 0.8
UPF3A-201ENST00000351487 NAP1L6A6NFF2 107 aa20.03■□□□□ 0.8
UPF3A-201ENST00000351487 PIAS2O75928 621 aa20.03■□□□□ 0.8
UPF3A-201ENST00000351487 ITPKBP27987 946 aa20.03■□□□□ 0.8
UPF3A-201ENST00000351487 OR1D5P58170 312 aa20.03■□□□□ 0.8
UPF3A-201ENST00000351487 AP3S2P59780 193 aa20.03■□□□□ 0.8
UPF3A-201ENST00000351487 SNRPD2P62316 118 aaKnown RBP20.03■□□□□ 0.8
UPF3A-201ENST00000351487 DMWDQ09019 674 aa20.03■□□□□ 0.8
UPF3A-201ENST00000351487 SGCBQ16585 318 aa20.03■□□□□ 0.8
UPF3A-201ENST00000351487 PRAMEF17Q5VTA0 474 aa20.03■□□□□ 0.8
UPF3A-201ENST00000351487 LRRN1Q6UXK5 716 aa20.03■□□□□ 0.8
UPF3A-201ENST00000351487 ZNF767PQ75MW2 155 aa20.03■□□□□ 0.8
UPF3A-201ENST00000351487 MAMDC2Q7Z304 686 aaPredicted RBP20.03■□□□□ 0.8
UPF3A-201ENST00000351487 C1orf216Q8TAB5 229 aa20.03■□□□□ 0.8
UPF3A-201ENST00000351487 OMA1Q96E52 524 aa20.03■□□□□ 0.8
UPF3A-201ENST00000351487 ELF4Q99607 663 aaPredicted RBP20.03■□□□□ 0.8
UPF3A-201ENST00000351487 PTDSS2Q9BVG9 487 aa20.03■□□□□ 0.8
UPF3A-201ENST00000351487 TBL1XR1Q9BZK7 514 aa20.03■□□□□ 0.8
UPF3A-201ENST00000351487 C20orf85Q9H1P6 137 aa20.03■□□□□ 0.8
UPF3A-201ENST00000351487 ZNF304Q9HCX3 659 aa20.03■□□□□ 0.8
UPF3A-201ENST00000351487 RCE1Q9Y256 329 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms