RNA–Protein interactions for RNA: ENST00000348165.9

UBE3C-201, Transcript of ubiquitin protein ligase E3C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3C, Length 5,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-201ENST00000348165 EMC6Q9BV81 110 aa17.13■□□□□ 0.33
UBE3C-201ENST00000348165 DUSP13Q9UII6 198 aa17.13■□□□□ 0.33
UBE3C-201ENST00000348165 TRBV5-4A0A0C4DH59 114 aa17.13■□□□□ 0.33
UBE3C-201ENST00000348165 CD300LBA8K4G0 201 aa17.13■□□□□ 0.33
UBE3C-201ENST00000348165 PRAF2O60831 178 aa17.13■□□□□ 0.33
UBE3C-201ENST00000348165 MZT1Q08AG7 82 aa17.13■□□□□ 0.33
UBE3C-201ENST00000348165 CMIPQ8IY22 773 aa17.13■□□□□ 0.33
UBE3C-201ENST00000348165 ZBTB8AQ96BR9 441 aa17.13■□□□□ 0.33
UBE3C-201ENST00000348165 MFFQ9GZY8 342 aa17.13■□□□□ 0.33
UBE3C-201ENST00000348165 RAB9BQ9NP90 201 aa17.13■□□□□ 0.33
UBE3C-201ENST00000348165 HSPB6O14558 160 aa17.12■□□□□ 0.33
UBE3C-201ENST00000348165 SLC36A2Q495M3 483 aa17.12■□□□□ 0.33
UBE3C-201ENST00000348165 DIMT1Q9UNQ2 313 aaKnown RBP17.12■□□□□ 0.33
UBE3C-201ENST00000348165 NTNG1Q9Y2I2 539 aa17.12■□□□□ 0.33
UBE3C-201ENST00000348165 TJP1Q07157 1748 aa17.12■□□□□ 0.33
UBE3C-201ENST00000348165 LGI1O95970 557 aa17.12■□□□□ 0.33
UBE3C-201ENST00000348165 BDKRB2P30411 391 aa17.12■□□□□ 0.33
UBE3C-201ENST00000348165 TAS2R19P59542 299 aa17.12■□□□□ 0.33
UBE3C-201ENST00000348165 Q499Y3 187 aa17.12■□□□□ 0.33
UBE3C-201ENST00000348165 SLX4IPQ5VYV7 408 aa17.12■□□□□ 0.33
UBE3C-201ENST00000348165 GRINAQ7Z429 371 aa17.12■□□□□ 0.33
UBE3C-201ENST00000348165 TXNL4BQ9NX01 149 aaKnown RBP17.12■□□□□ 0.33
UBE3C-201ENST00000348165 SLC25A37Q9NYZ2 338 aa17.12■□□□□ 0.33
UBE3C-201ENST00000348165 UGT2A1Q9Y4X1 527 aa17.12■□□□□ 0.33
UBE3C-201ENST00000348165 SLC16A6O15403 523 aa17.12■□□□□ 0.33
UBE3C-201ENST00000348165 HOXB5P09067 269 aa17.12■□□□□ 0.33
UBE3C-201ENST00000348165 LUMP51884 338 aaPredicted RBP17.12■□□□□ 0.33
UBE3C-201ENST00000348165 SAXO2Q658L1 398 aa17.12■□□□□ 0.33
UBE3C-201ENST00000348165 COMTD1Q86VU5 262 aa17.12■□□□□ 0.33
UBE3C-201ENST00000348165 GOT1L1Q8NHS2 421 aaPredicted RBP17.12■□□□□ 0.33
UBE3C-201ENST00000348165 MIB2Q96AX9 1013 aa17.12■□□□□ 0.33
UBE3C-201ENST00000348165 TMEM59Q9BXS4 323 aa17.12■□□□□ 0.33
UBE3C-201ENST00000348165 CLEC2DQ9UHP7 191 aa17.12■□□□□ 0.33
UBE3C-201ENST00000348165 SHISA7A6NL88 538 aa17.12■□□□□ 0.33
UBE3C-201ENST00000348165 NSA2O95478 260 aaKnown RBP17.12■□□□□ 0.33
UBE3C-201ENST00000348165 ETHE1O95571 254 aa17.12■□□□□ 0.33
UBE3C-201ENST00000348165 MYF5P13349 255 aa17.12■□□□□ 0.33
UBE3C-201ENST00000348165 CD22P20273 847 aa17.12■□□□□ 0.33
UBE3C-201ENST00000348165 GABREP78334 506 aa17.12■□□□□ 0.33
UBE3C-201ENST00000348165 FBXL6Q8N531 539 aa17.12■□□□□ 0.33
UBE3C-201ENST00000348165 TMEM185AQ8NFB2 350 aa17.12■□□□□ 0.33
UBE3C-201ENST00000348165 OR52I1Q8NGK6 324 aa17.12■□□□□ 0.33
UBE3C-201ENST00000348165 ANKRD19PQ9H560 264 aa17.12■□□□□ 0.33
UBE3C-201ENST00000348165 NHSQ6T4R5 1651 aa17.11■□□□□ 0.33
UBE3C-201ENST00000348165 COL18A1P39060 1754 aa17.11■□□□□ 0.33
UBE3C-201ENST00000348165 GPR171O14626 319 aa17.11■□□□□ 0.33
UBE3C-201ENST00000348165 SLC2A1P11166 492 aa17.11■□□□□ 0.33
UBE3C-201ENST00000348165 DLSTP36957 453 aa17.11■□□□□ 0.33
UBE3C-201ENST00000348165 RPS18P62269 152 aaKnown RBP17.11■□□□□ 0.33
UBE3C-201ENST00000348165 C6orf15Q6UXA7 325 aaPredicted RBP17.11■□□□□ 0.33
UBE3C-201ENST00000348165 NPSR1Q6W5P4 371 aa17.11■□□□□ 0.33
UBE3C-201ENST00000348165 SPEM1Q8N4L4 309 aa17.11■□□□□ 0.33
UBE3C-201ENST00000348165 ZNF454Q8N9F8 522 aa17.11■□□□□ 0.33
UBE3C-201ENST00000348165 ZNF416Q9BWM5 594 aa17.11■□□□□ 0.33
UBE3C-201ENST00000348165 C12orf49Q9H741 205 aa17.11■□□□□ 0.33
UBE3C-201ENST00000348165 A0A087WUU8 490 aa17.11■□□□□ 0.33
UBE3C-201ENST00000348165 CCDC163A0A0D9SF12 145 aa17.11■□□□□ 0.33
UBE3C-201ENST00000348165 BET1O15155 118 aa17.11■□□□□ 0.33
UBE3C-201ENST00000348165 SCG5P05408 212 aa17.11■□□□□ 0.33
UBE3C-201ENST00000348165 HTR2CP28335 458 aa17.11■□□□□ 0.33
UBE3C-201ENST00000348165 H1FNTQ75WM6 255 aaPredicted RBP17.11■□□□□ 0.33
UBE3C-201ENST00000348165 GPR155Q7Z3F1 870 aa17.11■□□□□ 0.33
UBE3C-201ENST00000348165 OR2A1Q8NGT9 310 aa17.11■□□□□ 0.33
UBE3C-201ENST00000348165 C3orf49Q96BT1 292 aa17.11■□□□□ 0.33
UBE3C-201ENST00000348165 PBDC1Q9BVG4 233 aa17.11■□□□□ 0.33
UBE3C-201ENST00000348165 NRIP3Q9NQ35 241 aa17.11■□□□□ 0.33
UBE3C-201ENST00000348165 A0A1B0GTL3 188 aa17.11■□□□□ 0.33
UBE3C-201ENST00000348165 ESCO2Q56NI9 601 aa17.11■□□□□ 0.33
UBE3C-201ENST00000348165 KDM4DQ6B0I6 523 aa17.11■□□□□ 0.33
UBE3C-201ENST00000348165 YRDCQ86U90 279 aaKnown RBP17.11■□□□□ 0.33
UBE3C-201ENST00000348165 LAX1Q8IWV1 398 aa17.11■□□□□ 0.33
UBE3C-201ENST00000348165 C12orf45Q8N5I9 185 aaPredicted RBP17.11■□□□□ 0.33
UBE3C-201ENST00000348165 LGALS14Q8TCE9 139 aa17.11■□□□□ 0.33
UBE3C-201ENST00000348165 SCGB2A1O75556 95 aa17.11■□□□□ 0.33
UBE3C-201ENST00000348165 APEHP13798 732 aaKnown RBP17.11■□□□□ 0.33
UBE3C-201ENST00000348165 ARL3P36405 182 aa17.11■□□□□ 0.33
UBE3C-201ENST00000348165 CAPZBP47756 277 aa17.11■□□□□ 0.33
UBE3C-201ENST00000348165 CLDN6P56747 220 aa17.11■□□□□ 0.33
UBE3C-201ENST00000348165 NKX6-1P78426 367 aaPredicted RBP17.11■□□□□ 0.33
UBE3C-201ENST00000348165 RPP25Q9BUL9 199 aaKnown RBP17.11■□□□□ 0.33
UBE3C-201ENST00000348165 RANGRFQ9HD47 186 aaPredicted RBP17.11■□□□□ 0.33
UBE3C-201ENST00000348165 SULT1C2O00338 296 aa17.1■□□□□ 0.33
UBE3C-201ENST00000348165 TIMM8AO60220 97 aaPredicted RBP17.1■□□□□ 0.33
UBE3C-201ENST00000348165 SLC34A2O95436 690 aa17.1■□□□□ 0.33
UBE3C-201ENST00000348165 TK1P04183 234 aa17.1■□□□□ 0.33
UBE3C-201ENST00000348165 TNK1Q13470 666 aa17.1■□□□□ 0.33
UBE3C-201ENST00000348165 SEMA4CQ9C0C4 833 aa17.1■□□□□ 0.33
UBE3C-201ENST00000348165 LAMA4Q16363 1823 aa17.1■□□□□ 0.33
UBE3C-201ENST00000348165 LRP5O75197 1615 aa17.1■□□□□ 0.33
UBE3C-201ENST00000348165 EIF4E2O60573 245 aaKnown RBP17.1■□□□□ 0.33
UBE3C-201ENST00000348165 SELENOFO60613 162 aa17.1■□□□□ 0.33
UBE3C-201ENST00000348165 FUCA1P04066 466 aa17.1■□□□□ 0.33
UBE3C-201ENST00000348165 IKZF1Q13422 519 aa17.1■□□□□ 0.33
UBE3C-201ENST00000348165 C1QTNF3Q9BXJ4 246 aa17.1■□□□□ 0.33
UBE3C-201ENST00000348165 ZNF225Q9UK10 706 aa17.1■□□□□ 0.33
UBE3C-201ENST00000348165 ZNF587BE7ETH6 402 aa17.1■□□□□ 0.33
UBE3C-201ENST00000348165 M0R082 166 aa17.1■□□□□ 0.33
UBE3C-201ENST00000348165 PEX14O75381 377 aa17.1■□□□□ 0.33
UBE3C-201ENST00000348165 CSO75390 466 aaKnown RBP17.1■□□□□ 0.33
UBE3C-201ENST00000348165 SLC16A9Q7RTY1 509 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms