RNA–Protein interactions for RNA: ENST00000348161.8

TOM1L1-201, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 2 BASIC

Gene TOM1L1, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-201ENST00000348161 NPIPB13A6NJU9 1138 aa13.55□□□□□ -0.24
TOM1L1-201ENST00000348161 NPIPB4C9JG80 1138 aa13.55□□□□□ -0.24
TOM1L1-201ENST00000348161 ANKRD65E5RJM6 399 aa13.55□□□□□ -0.24
TOM1L1-201ENST00000348161 C19orf84I3L1E1 186 aa13.55□□□□□ -0.24
TOM1L1-201ENST00000348161 IGHG1P01857 330 aa13.55□□□□□ -0.24
TOM1L1-201ENST00000348161 CD14P08571 375 aa13.55□□□□□ -0.24
TOM1L1-201ENST00000348161 ANXA8P13928 327 aa13.55□□□□□ -0.24
TOM1L1-201ENST00000348161 PSMB1P20618 241 aaKnown RBP13.55□□□□□ -0.24
TOM1L1-201ENST00000348161 TOP3AQ13472 1001 aaPredicted RBP13.55□□□□□ -0.24
TOM1L1-201ENST00000348161 RFX4Q33E94 735 aa13.55□□□□□ -0.24
TOM1L1-201ENST00000348161 SHQ1Q6PI26 577 aaKnown RBP13.55□□□□□ -0.24
TOM1L1-201ENST00000348161 NHLRC1Q6VVB1 395 aa13.55□□□□□ -0.24
TOM1L1-201ENST00000348161 STAC2Q6ZMT1 411 aa13.55□□□□□ -0.24
TOM1L1-201ENST00000348161 AMIGO2Q86SJ2 522 aa13.55□□□□□ -0.24
TOM1L1-201ENST00000348161 IGFN1Q86VF2 1251 aa13.55□□□□□ -0.24
TOM1L1-201ENST00000348161 HIPK1Q86Z02 1210 aa13.55□□□□□ -0.24
TOM1L1-201ENST00000348161 ATG16L2Q8NAA4 619 aa13.55□□□□□ -0.24
TOM1L1-201ENST00000348161 STEAP2Q8NFT2 490 aa13.55□□□□□ -0.24
TOM1L1-201ENST00000348161 FANK1Q8TC84 345 aa13.55□□□□□ -0.24
TOM1L1-201ENST00000348161 USB1Q9BQ65 265 aaKnown RBP13.55□□□□□ -0.24
TOM1L1-201ENST00000348161 KATNB1Q9BVA0 655 aa13.55□□□□□ -0.24
TOM1L1-201ENST00000348161 DGCR6LQ9BY27 220 aa13.55□□□□□ -0.24
TOM1L1-201ENST00000348161 LINC00470Q9BZP3 86 aa13.55□□□□□ -0.24
TOM1L1-201ENST00000348161 ENKD1Q9H0I2 346 aa13.55□□□□□ -0.24
TOM1L1-201ENST00000348161 SPTBN1Q01082 2364 aaKnown RBP13.55□□□□□ -0.24
TOM1L1-201ENST00000348161 G3V2T6 193 aa13.55□□□□□ -0.24
TOM1L1-201ENST00000348161 NR2C1P13056 603 aa13.55□□□□□ -0.24
TOM1L1-201ENST00000348161 ZNF23P17027 643 aa13.55□□□□□ -0.24
TOM1L1-201ENST00000348161 MPGP29372 298 aa13.55□□□□□ -0.24
TOM1L1-201ENST00000348161 SLC6A6P31641 620 aa13.55□□□□□ -0.24
TOM1L1-201ENST00000348161 KIR2DL3P43628 341 aa13.55□□□□□ -0.24
TOM1L1-201ENST00000348161 CSNK1A1P48729 337 aa13.55□□□□□ -0.24
TOM1L1-201ENST00000348161 CLRN1P58418 232 aa13.55□□□□□ -0.24
TOM1L1-201ENST00000348161 RPL27P61353 136 aaKnown RBP13.55□□□□□ -0.24
TOM1L1-201ENST00000348161 FHL1Q13642 323 aa13.55□□□□□ -0.24
TOM1L1-201ENST00000348161 FAM205BPQ63HN1 556 aa13.55□□□□□ -0.24
TOM1L1-201ENST00000348161 MEX3BQ6ZN04 569 aaKnown RBP13.55□□□□□ -0.24
TOM1L1-201ENST00000348161 DPY19L2P2Q6ZN68 376 aa13.55□□□□□ -0.24
TOM1L1-201ENST00000348161 TMEM123Q8N131 208 aa13.55□□□□□ -0.24
TOM1L1-201ENST00000348161 OR52L1Q8NGH7 329 aa13.55□□□□□ -0.24
TOM1L1-201ENST00000348161 OR5K1Q8NHB7 308 aa13.55□□□□□ -0.24
TOM1L1-201ENST00000348161 CENPNQ96H22 339 aaPredicted RBP13.55□□□□□ -0.24
TOM1L1-201ENST00000348161 ALKBH3Q96Q83 286 aaPredicted RBP13.55□□□□□ -0.24
TOM1L1-201ENST00000348161 SPOCK3Q9BQ16 436 aa13.55□□□□□ -0.24
TOM1L1-201ENST00000348161 OR52D1Q9H346 318 aa13.55□□□□□ -0.24
TOM1L1-201ENST00000348161 NTN4Q9HB63 628 aa13.55□□□□□ -0.24
TOM1L1-201ENST00000348161 KIF17Q9P2E2 1029 aa13.55□□□□□ -0.24
TOM1L1-201ENST00000348161 IL20RAQ9UHF4 553 aa13.55□□□□□ -0.24
TOM1L1-201ENST00000348161 ZNF346Q9UL40 294 aaKnown RBP13.55□□□□□ -0.24
TOM1L1-201ENST00000348161 INTS1Q8N201 2190 aaKnown RBP13.55□□□□□ -0.24
TOM1L1-201ENST00000348161 M0R3G1 203 aa13.54□□□□□ -0.24
TOM1L1-201ENST00000348161 XKRYO14609 159 aa13.54□□□□□ -0.24
TOM1L1-201ENST00000348161 UPK3AO75631 287 aa13.54□□□□□ -0.24
TOM1L1-201ENST00000348161 LYZL6O75951 148 aa13.54□□□□□ -0.24
TOM1L1-201ENST00000348161 COX6B1P14854 86 aa13.54□□□□□ -0.24
TOM1L1-201ENST00000348161 PPP3CBP16298 524 aa13.54□□□□□ -0.24
TOM1L1-201ENST00000348161 CDH2P19022 906 aaPredicted RBP13.54□□□□□ -0.24
TOM1L1-201ENST00000348161 IGHV1-2P23083 117 aa13.54□□□□□ -0.24
TOM1L1-201ENST00000348161 NOS3P29474 1203 aa13.54□□□□□ -0.24
TOM1L1-201ENST00000348161 RPS6KA3P51812 740 aa13.54□□□□□ -0.24
TOM1L1-201ENST00000348161 ERVK-25P63136 954 aa13.54□□□□□ -0.24
TOM1L1-201ENST00000348161 OR7E24Q6IFN5 339 aa13.54□□□□□ -0.24
TOM1L1-201ENST00000348161 TMEM179BQ7Z7N9 219 aa13.54□□□□□ -0.24
TOM1L1-201ENST00000348161 C20orf196Q8IYI0 205 aa13.54□□□□□ -0.24
TOM1L1-201ENST00000348161 LRRC75AQ8NAA5 344 aa13.54□□□□□ -0.24
TOM1L1-201ENST00000348161 MED18Q9BUE0 208 aa13.54□□□□□ -0.24
TOM1L1-201ENST00000348161 ULBP2Q9BZM5 246 aa13.54□□□□□ -0.24
TOM1L1-201ENST00000348161 SEMA6AQ9H2E6 1030 aa13.54□□□□□ -0.24
TOM1L1-201ENST00000348161 CRLF2Q9HC73 371 aa13.54□□□□□ -0.24
TOM1L1-201ENST00000348161 A6NIZ1 184 aa13.53□□□□□ -0.24
TOM1L1-201ENST00000348161 CENPBD1B2RD01 187 aa13.53□□□□□ -0.24
TOM1L1-201ENST00000348161 ACADSP16219 412 aa13.53□□□□□ -0.24
TOM1L1-201ENST00000348161 PRKACGP22612 351 aa13.53□□□□□ -0.24
TOM1L1-201ENST00000348161 ACVR1BP36896 505 aa13.53□□□□□ -0.24
TOM1L1-201ENST00000348161 RAP1BP61224 184 aa13.53□□□□□ -0.24
TOM1L1-201ENST00000348161 RAP1AP62834 184 aa13.53□□□□□ -0.24
TOM1L1-201ENST00000348161 ROR2Q01974 943 aaKnown RBP13.53□□□□□ -0.24
TOM1L1-201ENST00000348161 SNTB1Q13884 538 aaKnown RBP13.53□□□□□ -0.24
TOM1L1-201ENST00000348161 C9orf135Q5VTT2 229 aa13.53□□□□□ -0.24
TOM1L1-201ENST00000348161 ANKRD34AQ69YU3 496 aa13.53□□□□□ -0.24
TOM1L1-201ENST00000348161 GPR139Q6DWJ6 353 aa13.53□□□□□ -0.24
TOM1L1-201ENST00000348161 ZNF620Q6ZNG0 422 aa13.53□□□□□ -0.24
TOM1L1-201ENST00000348161 RASSF6Q6ZTQ3 369 aa13.53□□□□□ -0.24
TOM1L1-201ENST00000348161 BHLHA15Q7RTS1 189 aaPredicted RBP13.53□□□□□ -0.24
TOM1L1-201ENST00000348161 DMRTC2Q8IXT2 367 aaPredicted RBP13.53□□□□□ -0.24
TOM1L1-201ENST00000348161 SVOPLQ8N434 492 aa13.53□□□□□ -0.24
TOM1L1-201ENST00000348161 ASB10Q8WXI3 467 aa13.53□□□□□ -0.24
TOM1L1-201ENST00000348161 NIPSNAP1Q9BPW8 284 aa13.53□□□□□ -0.24
TOM1L1-201ENST00000348161 IFT27Q9BW83 186 aa13.53□□□□□ -0.24
TOM1L1-201ENST00000348161 ACTR6Q9GZN1 396 aa13.53□□□□□ -0.24
TOM1L1-201ENST00000348161 S100A14Q9HCY8 104 aa13.53□□□□□ -0.24
TOM1L1-201ENST00000348161 NRIP3Q9NQ35 241 aa13.53□□□□□ -0.24
TOM1L1-201ENST00000348161 IL20Q9NYY1 176 aa13.53□□□□□ -0.24
TOM1L1-201ENST00000348161 GLTPQ9NZD2 209 aa13.53□□□□□ -0.24
TOM1L1-201ENST00000348161 CASKO14936 926 aa13.53□□□□□ -0.24
TOM1L1-201ENST00000348161 IGHMP01871 453 aa13.53□□□□□ -0.24
TOM1L1-201ENST00000348161 COX5AP20674 150 aa13.53□□□□□ -0.24
TOM1L1-201ENST00000348161 HOXC12P31275 282 aa13.53□□□□□ -0.24
TOM1L1-201ENST00000348161 ARMC4Q5T2S8 1044 aa13.53□□□□□ -0.24
TOM1L1-201ENST00000348161 CD300LDQ6UXZ3 194 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms