RNA–Protein interactions for RNA: ENST00000335793.3

CDC42EP4-201, Transcript of CDC42 effector protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP4, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-201ENST00000335793 ATP1B1P05026 303 aa15.11■□□□□ 0.01
CDC42EP4-201ENST00000335793 F13BP05160 661 aa15.11■□□□□ 0.01
CDC42EP4-201ENST00000335793 PVALBP20472 110 aaPredicted RBP15.11■□□□□ 0.01
CDC42EP4-201ENST00000335793 LCN6P62502 163 aa15.11■□□□□ 0.01
CDC42EP4-201ENST00000335793 MC2RQ01718 297 aa15.11■□□□□ 0.01
CDC42EP4-201ENST00000335793 NFATC4Q14934 902 aa15.11■□□□□ 0.01
CDC42EP4-201ENST00000335793 ELOA3BQ3SY89 546 aa15.11■□□□□ 0.01
CDC42EP4-201ENST00000335793 PXKQ7Z7A4 578 aa15.11■□□□□ 0.01
CDC42EP4-201ENST00000335793 TMPRSS12Q86WS5 348 aa15.11■□□□□ 0.01
CDC42EP4-201ENST00000335793 ELOA3Q8NG57 546 aa15.11■□□□□ 0.01
CDC42EP4-201ENST00000335793 Q9N2J8 555 aa15.11■□□□□ 0.01
CDC42EP4-201ENST00000335793 LRIT1Q9P2V4 623 aa15.11■□□□□ 0.01
CDC42EP4-201ENST00000335793 L7N2F9 121 aa15.1■□□□□ 0.01
CDC42EP4-201ENST00000335793 NMBP08949 121 aa15.1■□□□□ 0.01
CDC42EP4-201ENST00000335793 PSMB1P20618 241 aaKnown RBP15.1■□□□□ 0.01
CDC42EP4-201ENST00000335793 SELENOPP49908 381 aa15.1■□□□□ 0.01
CDC42EP4-201ENST00000335793 TFF2Q03403 129 aa15.1■□□□□ 0.01
CDC42EP4-201ENST00000335793 FAM53BQ14153 422 aa15.1■□□□□ 0.01
CDC42EP4-201ENST00000335793 ZNF550Q7Z398 422 aa15.1■□□□□ 0.01
CDC42EP4-201ENST00000335793 SFT2D1Q8WV19 159 aa15.1■□□□□ 0.01
CDC42EP4-201ENST00000335793 ZNRF4Q8WWF5 429 aa15.1■□□□□ 0.01
CDC42EP4-201ENST00000335793 KLHL9Q9P2J3 617 aa15.1■□□□□ 0.01
CDC42EP4-201ENST00000335793 CHD9Q3L8U1 2897 aa15.1■□□□□ 0.01
CDC42EP4-201ENST00000335793 A0A1B0GV90 55 aa15.1■□□□□ 0.01
CDC42EP4-201ENST00000335793 ITGA10O75578 1167 aa15.1■□□□□ 0.01
CDC42EP4-201ENST00000335793 CTSEP14091 401 aa15.1■□□□□ 0.01
CDC42EP4-201ENST00000335793 LSSP48449 732 aa15.1■□□□□ 0.01
CDC42EP4-201ENST00000335793 AP3S2P59780 193 aa15.1■□□□□ 0.01
CDC42EP4-201ENST00000335793 ALKBH2Q6NS38 261 aa15.1■□□□□ 0.01
CDC42EP4-201ENST00000335793 FGD2Q7Z6J4 655 aa15.1■□□□□ 0.01
CDC42EP4-201ENST00000335793 ZNF676Q8N7Q3 588 aa15.1■□□□□ 0.01
CDC42EP4-201ENST00000335793 ZPLD1Q8TCW7 415 aa15.1■□□□□ 0.01
CDC42EP4-201ENST00000335793 WBP1Q96G27 269 aa15.1■□□□□ 0.01
CDC42EP4-201ENST00000335793 DMRTA2Q96SC8 542 aa15.1■□□□□ 0.01
CDC42EP4-201ENST00000335793 MAP3K3Q99759 626 aa15.1■□□□□ 0.01
CDC42EP4-201ENST00000335793 DPYSL5Q9BPU6 564 aa15.1■□□□□ 0.01
CDC42EP4-201ENST00000335793 NKX6-2Q9C056 277 aaPredicted RBP15.1■□□□□ 0.01
CDC42EP4-201ENST00000335793 MTIF3Q9H2K0 278 aaKnown RBP15.1■□□□□ 0.01
CDC42EP4-201ENST00000335793 V9GY05 133 aa15.1■□□□□ 0.01
CDC42EP4-201ENST00000335793 OR6C68A6NDL8 312 aa15.09■□□□□ 0.01
CDC42EP4-201ENST00000335793 RAD1O60671 282 aa15.09■□□□□ 0.01
CDC42EP4-201ENST00000335793 ANXA2P07355 339 aaKnown RBP15.09■□□□□ 0.01
CDC42EP4-201ENST00000335793 ADH7P40394 386 aa15.09■□□□□ 0.01
CDC42EP4-201ENST00000335793 AQP2P41181 271 aa15.09■□□□□ 0.01
CDC42EP4-201ENST00000335793 PSMA6P60900 246 aaKnown RBP15.09■□□□□ 0.01
CDC42EP4-201ENST00000335793 HACD4Q5VWC8 232 aa15.09■□□□□ 0.01
CDC42EP4-201ENST00000335793 C11orf88Q6PI97 169 aa15.09■□□□□ 0.01
CDC42EP4-201ENST00000335793 PHOSPHO1Q8TCT1 267 aa15.09■□□□□ 0.01
CDC42EP4-201ENST00000335793 THEM6Q8WUY1 208 aa15.09■□□□□ 0.01
CDC42EP4-201ENST00000335793 GINS4Q9BRT9 223 aa15.09■□□□□ 0.01
CDC42EP4-201ENST00000335793 TMEM138Q9NPI0 162 aa15.09■□□□□ 0.01
CDC42EP4-201ENST00000335793 RXFP3Q9NSD7 469 aa15.09■□□□□ 0.01
CDC42EP4-201ENST00000335793 NTMQ9P121 344 aa15.09■□□□□ 0.01
CDC42EP4-201ENST00000335793 A0A087WV62 115 aa15.09■□□□□ 0.01
CDC42EP4-201ENST00000335793 TRAV1-2A0A0B4J238 106 aa15.09■□□□□ 0.01
CDC42EP4-201ENST00000335793 A0A1B0GVI7 797 aa15.09■□□□□ 0.01
CDC42EP4-201ENST00000335793 C4orf47A7E2U8 309 aa15.09■□□□□ 0.01
CDC42EP4-201ENST00000335793 NUDT14O95848 222 aa15.09■□□□□ 0.01
CDC42EP4-201ENST00000335793 FBXO45P0C2W1 286 aa15.09■□□□□ 0.01
CDC42EP4-201ENST00000335793 FCARP24071 287 aa15.09■□□□□ 0.01
CDC42EP4-201ENST00000335793 CCR9P51686 369 aa15.09■□□□□ 0.01
CDC42EP4-201ENST00000335793 ALKBH1Q13686 389 aaKnown RBP15.09■□□□□ 0.01
CDC42EP4-201ENST00000335793 UBE2NLQ5JXB2 153 aa15.09■□□□□ 0.01
CDC42EP4-201ENST00000335793 C12orf45Q8N5I9 185 aaPredicted RBP15.09■□□□□ 0.01
CDC42EP4-201ENST00000335793 POMGNT2Q8NAT1 580 aa15.09■□□□□ 0.01
CDC42EP4-201ENST00000335793 RCBTB1Q8NDN9 531 aa15.09■□□□□ 0.01
CDC42EP4-201ENST00000335793 OR4C3Q8NH37 302 aa15.09■□□□□ 0.01
CDC42EP4-201ENST00000335793 OR51Q1Q8NH59 317 aa15.09■□□□□ 0.01
CDC42EP4-201ENST00000335793 SLC2A12Q8TD20 617 aa15.09■□□□□ 0.01
CDC42EP4-201ENST00000335793 NUP210Q8TEM1 1887 aaPredicted RBP15.09■□□□□ 0.01
CDC42EP4-201ENST00000335793 NOX3Q9HBY0 568 aa15.09■□□□□ 0.01
CDC42EP4-201ENST00000335793 LYRM4Q9HD34 91 aa15.09■□□□□ 0.01
CDC42EP4-201ENST00000335793 HRASLSQ9HDD0 168 aa15.09■□□□□ 0.01
CDC42EP4-201ENST00000335793 PRDM9Q9NQV7 894 aa15.09■□□□□ 0.01
CDC42EP4-201ENST00000335793 SCP2D1Q9UJQ7 156 aa15.09■□□□□ 0.01
CDC42EP4-201ENST00000335793 METTL21EPA6NDL7 271 aa15.09■□□□□ 0.01
CDC42EP4-201ENST00000335793 MEIS3P1A6NDR6 274 aa15.09■□□□□ 0.01
CDC42EP4-201ENST00000335793 TMEM200CA6NKL6 621 aa15.09■□□□□ 0.01
CDC42EP4-201ENST00000335793 GPR31O00270 319 aa15.09■□□□□ 0.01
CDC42EP4-201ENST00000335793 GALR3O60755 368 aaPredicted RBP15.09■□□□□ 0.01
CDC42EP4-201ENST00000335793 CTSBP07858 339 aa15.09■□□□□ 0.01
CDC42EP4-201ENST00000335793 SPI1P17947 270 aa15.09■□□□□ 0.01
CDC42EP4-201ENST00000335793 GPR143P51810 404 aa15.09■□□□□ 0.01
CDC42EP4-201ENST00000335793 PSG6Q00889 435 aa15.09■□□□□ 0.01
CDC42EP4-201ENST00000335793 RGS7BPQ6MZT1 257 aaPredicted RBP15.09■□□□□ 0.01
CDC42EP4-201ENST00000335793 CA13Q8N1Q1 262 aa15.09■□□□□ 0.01
CDC42EP4-201ENST00000335793 BVESQ8NE79 360 aa15.09■□□□□ 0.01
CDC42EP4-201ENST00000335793 SMIM4Q8WVI0 70 aa15.09■□□□□ 0.01
CDC42EP4-201ENST00000335793 WDR89Q96FK6 387 aaPredicted RBP15.09■□□□□ 0.01
CDC42EP4-201ENST00000335793 FOXN4Q96NZ1 517 aa15.09■□□□□ 0.01
CDC42EP4-201ENST00000335793 MYADMQ96S97 322 aa15.09■□□□□ 0.01
CDC42EP4-201ENST00000335793 SEMA4CQ9C0C4 833 aa15.09■□□□□ 0.01
CDC42EP4-201ENST00000335793 DLL4Q9NR61 685 aa15.09■□□□□ 0.01
CDC42EP4-201ENST00000335793 DNAJB12Q9NXW2 375 aaKnown RBP15.09■□□□□ 0.01
CDC42EP4-201ENST00000335793 A0A1B0GTH9 108 aa15.08■□□□□ 0
CDC42EP4-201ENST00000335793 CYR61O00622 381 aa15.08■□□□□ 0
CDC42EP4-201ENST00000335793 HCRTR1O43613 425 aa15.08■□□□□ 0
CDC42EP4-201ENST00000335793 SPDEFO95238 335 aa15.08■□□□□ 0
CDC42EP4-201ENST00000335793 LYPD3O95274 346 aa15.08■□□□□ 0
CDC42EP4-201ENST00000335793 KLK3P07288 261 aaPredicted RBP15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms