RNA–Protein interactions for RNA: ENST00000334944.9

SF1-202, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-202ENST00000334944 ZNF19P17023 458 aa12.68□□□□□ -0.38
SF1-202ENST00000334944 IGFBP4P22692 258 aa12.68□□□□□ -0.38
SF1-202ENST00000334944 THBS2P35442 1172 aa12.68□□□□□ -0.38
SF1-202ENST00000334944 SEC61A1P61619 476 aaKnown RBP12.68□□□□□ -0.38
SF1-202ENST00000334944 SFXN4Q6P4A7 337 aa12.68□□□□□ -0.38
SF1-202ENST00000334944 MCATQ8IVS2 390 aaKnown RBP12.68□□□□□ -0.38
SF1-202ENST00000334944 TMEM185AQ8NFB2 350 aa12.68□□□□□ -0.38
SF1-202ENST00000334944 TIMP4Q99727 224 aa12.68□□□□□ -0.38
SF1-202ENST00000334944 ZNF559Q9BR84 538 aa12.68□□□□□ -0.38
SF1-202ENST00000334944 MIOXQ9UGB7 285 aa12.68□□□□□ -0.38
SF1-202ENST00000334944 NDRG3Q9UGV2 375 aa12.68□□□□□ -0.38
SF1-202ENST00000334944 NPTNQ9Y639 398 aa12.68□□□□□ -0.38
SF1-202ENST00000334944 RNF215Q9Y6U7 377 aa12.68□□□□□ -0.38
SF1-202ENST00000334944 PRAMEF26H0Y7S4 382 aa12.68□□□□□ -0.38
SF1-202ENST00000334944 CRYBA1P05813 215 aa12.68□□□□□ -0.38
SF1-202ENST00000334944 THBS1P07996 1170 aa12.68□□□□□ -0.38
SF1-202ENST00000334944 PTBP1P26599 531 aaKnown RBP eCLIP12.68□□□□□ -0.383e-17■□□□□ 10.3
SF1-202ENST00000334944 RABIFP47224 123 aa12.68□□□□□ -0.38
SF1-202ENST00000334944 YPEL5P62699 121 aa12.68□□□□□ -0.38
SF1-202ENST00000334944 CCINQ13939 588 aa12.68□□□□□ -0.38
SF1-202ENST00000334944 AMZ1Q400G9 498 aa12.68□□□□□ -0.38
SF1-202ENST00000334944 ALG10BQ5I7T1 473 aa12.68□□□□□ -0.38
SF1-202ENST00000334944 PRPF38BQ5VTL8 546 aaKnown RBP12.68□□□□□ -0.38
SF1-202ENST00000334944 RNF44Q7L0R7 432 aa12.68□□□□□ -0.38
SF1-202ENST00000334944 SSX6Q7RTT6 188 aa12.68□□□□□ -0.38
SF1-202ENST00000334944 ACBD7Q8N6N7 88 aa12.68□□□□□ -0.38
SF1-202ENST00000334944 RCBTB1Q8NDN9 531 aa12.68□□□□□ -0.38
SF1-202ENST00000334944 SDR9C7Q8NEX9 313 aa12.68□□□□□ -0.38
SF1-202ENST00000334944 OR5T2Q8NGG2 359 aa12.68□□□□□ -0.38
SF1-202ENST00000334944 OR4C3Q8NH37 302 aa12.68□□□□□ -0.38
SF1-202ENST00000334944 OR4K13Q8NH42 304 aa12.68□□□□□ -0.38
SF1-202ENST00000334944 DHCR7Q9UBM7 475 aaKnown RBP12.68□□□□□ -0.38
SF1-202ENST00000334944 SIGLEC7Q9Y286 467 aa12.68□□□□□ -0.38
SF1-202ENST00000334944 ADAM18Q9Y3Q7 739 aa12.68□□□□□ -0.38
SF1-202ENST00000334944 DMDP11532 3685 aa12.68□□□□□ -0.38
SF1-202ENST00000334944 FAM171A2A8MVW0 826 aa12.68□□□□□ -0.38
SF1-202ENST00000334944 PSMD9O00233 223 aa12.68□□□□□ -0.38
SF1-202ENST00000334944 NPR2P20594 1047 aa12.68□□□□□ -0.38
SF1-202ENST00000334944 GDNFP39905 211 aa12.68□□□□□ -0.38
SF1-202ENST00000334944 OR12D2P58182 307 aa12.68□□□□□ -0.38
SF1-202ENST00000334944 KCNAB1Q14722 419 aa12.68□□□□□ -0.38
SF1-202ENST00000334944 RAB30Q15771 203 aa12.68□□□□□ -0.38
SF1-202ENST00000334944 AKIRIN2Q53H80 203 aa12.68□□□□□ -0.38
SF1-202ENST00000334944 BEX5Q5H9J7 111 aa12.68□□□□□ -0.38
SF1-202ENST00000334944 PRAMEF17Q5VTA0 474 aa12.68□□□□□ -0.38
SF1-202ENST00000334944 NKAIN2Q5VXU1 208 aa12.68□□□□□ -0.38
SF1-202ENST00000334944 HBMQ6B0K9 141 aa12.68□□□□□ -0.38
SF1-202ENST00000334944 PYHIN1Q6K0P9 492 aa12.68□□□□□ -0.38
SF1-202ENST00000334944 C5orf46Q6UWT4 87 aa12.68□□□□□ -0.38
SF1-202ENST00000334944 C17orf47Q8NEP4 570 aa12.68□□□□□ -0.38
SF1-202ENST00000334944 ZMYND19Q96E35 227 aaPredicted RBP12.68□□□□□ -0.38
SF1-202ENST00000334944 MNTQ99583 582 aa12.68□□□□□ -0.38
SF1-202ENST00000334944 LRRC61Q9BV99 259 aa12.68□□□□□ -0.38
SF1-202ENST00000334944 TMEM27Q9HBJ8 222 aa12.68□□□□□ -0.38
SF1-202ENST00000334944 TMEM184BQ9Y519 407 aaPredicted RBP12.68□□□□□ -0.38
SF1-202ENST00000334944 MPTX1A8MV57 137 aa12.67□□□□□ -0.38
SF1-202ENST00000334944 LY86O95711 162 aa12.67□□□□□ -0.38
SF1-202ENST00000334944 HPP00738 406 aa12.67□□□□□ -0.38
SF1-202ENST00000334944 SELLP14151 372 aa12.67□□□□□ -0.38
SF1-202ENST00000334944 RPS4Y1P22090 263 aaKnown RBP12.67□□□□□ -0.38
SF1-202ENST00000334944 RBMS1P29558 406 aaKnown RBP12.67□□□□□ -0.38
SF1-202ENST00000334944 NAA10P41227 235 aaPredicted RBP12.67□□□□□ -0.38
SF1-202ENST00000334944 GFERP55789 205 aa12.67□□□□□ -0.38
SF1-202ENST00000334944 MEPCEQ7L2J0 689 aaKnown RBP12.67□□□□□ -0.38
SF1-202ENST00000334944 CDK20Q8IZL9 346 aa12.67□□□□□ -0.38
SF1-202ENST00000334944 PXT1Q8NFP0 134 aa12.67□□□□□ -0.38
SF1-202ENST00000334944 OR5M9Q8NGP3 310 aa12.67□□□□□ -0.38
SF1-202ENST00000334944 OR52N1Q8NH53 320 aa12.67□□□□□ -0.38
SF1-202ENST00000334944 EDARADDQ8WWZ3 215 aa12.67□□□□□ -0.38
SF1-202ENST00000334944 KISS1RQ969F8 398 aaPredicted RBP12.67□□□□□ -0.38
SF1-202ENST00000334944 MRPL48Q96GC5 212 aaKnown RBP12.67□□□□□ -0.38
SF1-202ENST00000334944 TEAD3Q99594 435 aa12.67□□□□□ -0.38
SF1-202ENST00000334944 EMC3Q9P0I2 261 aa12.67□□□□□ -0.38
SF1-202ENST00000334944 ZNF346Q9UL40 294 aaKnown RBP12.67□□□□□ -0.38
SF1-202ENST00000334944 WDFY4Q6ZS81 3184 aa12.67□□□□□ -0.38
SF1-202ENST00000334944 CNTRLQ7Z7A1 2325 aa12.67□□□□□ -0.38
SF1-202ENST00000334944 C4BPBP20851 252 aa12.67□□□□□ -0.38
SF1-202ENST00000334944 S1PR1P21453 382 aa12.67□□□□□ -0.38
SF1-202ENST00000334944 GRPRP30550 384 aa12.67□□□□□ -0.38
SF1-202ENST00000334944 PTGFRP43088 359 aa12.67□□□□□ -0.38
SF1-202ENST00000334944 SGCAQ16586 387 aa12.67□□□□□ -0.38
SF1-202ENST00000334944 C9orf152Q5JTZ5 239 aa12.67□□□□□ -0.38
SF1-202ENST00000334944 KIRREL2Q6UWL6 708 aa12.67□□□□□ -0.38
SF1-202ENST00000334944 NPSR1Q6W5P4 371 aa12.67□□□□□ -0.38
SF1-202ENST00000334944 SMRP1Q8NCR6 262 aa12.67□□□□□ -0.38
SF1-202ENST00000334944 CTHRC1Q96CG8 243 aa12.67□□□□□ -0.38
SF1-202ENST00000334944 ORAI1Q96D31 301 aa12.67□□□□□ -0.38
SF1-202ENST00000334944 MMABQ96EY8 250 aaPredicted RBP12.67□□□□□ -0.38
SF1-202ENST00000334944 C4orf36Q96KX1 117 aa12.67□□□□□ -0.38
SF1-202ENST00000334944 MED9Q9NWA0 146 aa12.67□□□□□ -0.38
SF1-202ENST00000334944 C17orf51A8MQB3 221 aa12.66□□□□□ -0.38
SF1-202ENST00000334944 SULT1C2O00338 296 aa12.66□□□□□ -0.38
SF1-202ENST00000334944 TXNL1O43396 289 aa12.66□□□□□ -0.38
SF1-202ENST00000334944 FMO6PO60774 539 aa12.66□□□□□ -0.38
SF1-202ENST00000334944 IGHA1P01876 353 aa12.66□□□□□ -0.38
SF1-202ENST00000334944 ADH7P40394 386 aa12.66□□□□□ -0.38
SF1-202ENST00000334944 MANEAQ5SRI9 462 aa12.66□□□□□ -0.38
SF1-202ENST00000334944 LINGO2Q7L985 606 aa12.66□□□□□ -0.38
SF1-202ENST00000334944 C19orf47Q8N9M1 422 aaKnown RBP12.66□□□□□ -0.38
SF1-202ENST00000334944 OR52E2Q8NGJ4 325 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms