RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 ARSGQ96EG1 525 aa10.8□□□□□ -0.68
HDAC6-201ENST00000334136 TMEM41AQ96HV5 264 aa10.8□□□□□ -0.68
HDAC6-201ENST00000334136 DDOQ99489 341 aa10.8□□□□□ -0.68
HDAC6-201ENST00000334136 GABARAPL1Q9H0R8 117 aa10.8□□□□□ -0.68
HDAC6-201ENST00000334136 UBQLN4Q9NRR5 601 aa10.8□□□□□ -0.68
HDAC6-201ENST00000334136 ATPIF1Q9UII2 106 aa10.8□□□□□ -0.68
HDAC6-201ENST00000334136 MKI67P46013 3256 aaKnown RBP10.8□□□□□ -0.68
HDAC6-201ENST00000334136 TEX51A0A1B0GUA7 166 aa10.8□□□□□ -0.68
HDAC6-201ENST00000334136 SC5DO75845 299 aa10.8□□□□□ -0.68
HDAC6-201ENST00000334136 AHSA1O95433 338 aa10.8□□□□□ -0.68
HDAC6-201ENST00000334136 CD59P13987 128 aa10.8□□□□□ -0.68
HDAC6-201ENST00000334136 ELK1P19419 428 aa10.8□□□□□ -0.68
HDAC6-201ENST00000334136 GDNFP39905 211 aa10.8□□□□□ -0.68
HDAC6-201ENST00000334136 CDNFQ49AH0 187 aa10.8□□□□□ -0.68
HDAC6-201ENST00000334136 SFXN4Q6P4A7 337 aa10.8□□□□□ -0.68
HDAC6-201ENST00000334136 LRFN4Q6PJG9 635 aa10.8□□□□□ -0.68
HDAC6-201ENST00000334136 RNF165Q6ZSG1 346 aa10.8□□□□□ -0.68
HDAC6-201ENST00000334136 ESPNLQ6ZVH7 1005 aa10.8□□□□□ -0.68
HDAC6-201ENST00000334136 NUP54Q7Z3B4 507 aa10.8□□□□□ -0.68
HDAC6-201ENST00000334136 ZNF440Q8IYI8 595 aa10.8□□□□□ -0.68
HDAC6-201ENST00000334136 OR56B4Q8NH76 319 aa10.8□□□□□ -0.68
HDAC6-201ENST00000334136 SYT4Q9H2B2 425 aa10.8□□□□□ -0.68
HDAC6-201ENST00000334136 POLE3Q9NRF9 147 aa10.8□□□□□ -0.68
HDAC6-201ENST00000334136 ASF1BQ9NVP2 202 aa10.8□□□□□ -0.68
HDAC6-201ENST00000334136 FBXL2Q9UKC9 423 aa10.8□□□□□ -0.68
HDAC6-201ENST00000334136 IER3IP1Q9Y5U9 82 aa10.8□□□□□ -0.68
HDAC6-201ENST00000334136 ZAR1LA6NP61 321 aa10.8□□□□□ -0.68
HDAC6-201ENST00000334136 ACOT7O00154 380 aa10.8□□□□□ -0.68
HDAC6-201ENST00000334136 AGPAT2O15120 278 aa10.8□□□□□ -0.68
HDAC6-201ENST00000334136 F10P00742 488 aa10.8□□□□□ -0.68
HDAC6-201ENST00000334136 GRK5P34947 590 aa10.8□□□□□ -0.68
HDAC6-201ENST00000334136 RAE1P78406 368 aaKnown RBP10.8□□□□□ -0.68
HDAC6-201ENST00000334136 C8orf82Q6P1X6 216 aaPredicted RBP10.8□□□□□ -0.68
HDAC6-201ENST00000334136 METAP1DQ6UB28 335 aaPredicted RBP10.8□□□□□ -0.68
HDAC6-201ENST00000334136 NAXEQ8NCW5 288 aa10.8□□□□□ -0.68
HDAC6-201ENST00000334136 MORN4Q8NDC4 146 aa10.8□□□□□ -0.68
HDAC6-201ENST00000334136 NEK7Q8TDX7 302 aa10.8□□□□□ -0.68
HDAC6-201ENST00000334136 CHMP1AQ9HD42 196 aaPredicted RBP10.8□□□□□ -0.68
HDAC6-201ENST00000334136 A0A1B0GV50 99 aa10.8□□□□□ -0.68
HDAC6-201ENST00000334136 F8W036 122 aa10.8□□□□□ -0.68
HDAC6-201ENST00000334136 HCRTR1O43613 425 aa10.8□□□□□ -0.68
HDAC6-201ENST00000334136 PEX14O75381 377 aa10.8□□□□□ -0.68
HDAC6-201ENST00000334136 INHBBP09529 407 aa10.8□□□□□ -0.68
HDAC6-201ENST00000334136 ZNF28P17035 718 aa10.8□□□□□ -0.68
HDAC6-201ENST00000334136 SOX18P35713 384 aa10.8□□□□□ -0.68
HDAC6-201ENST00000334136 ACTA2P62736 377 aa10.8□□□□□ -0.68
HDAC6-201ENST00000334136 ACTG2P63267 376 aa10.8□□□□□ -0.68
HDAC6-201ENST00000334136 BLOC1S1P78537 153 aa10.8□□□□□ -0.68
HDAC6-201ENST00000334136 FABP5Q01469 135 aa10.8□□□□□ -0.68
HDAC6-201ENST00000334136 TSPAN31Q12999 210 aa10.8□□□□□ -0.68
HDAC6-201ENST00000334136 SQSTM1Q13501 440 aa10.8□□□□□ -0.68
HDAC6-201ENST00000334136 RSPO4Q2I0M5 234 aaPredicted RBP10.8□□□□□ -0.68
HDAC6-201ENST00000334136 RAET1LQ5VY80 246 aa10.8□□□□□ -0.68
HDAC6-201ENST00000334136 TCTN3Q6NUS6 607 aa10.8□□□□□ -0.68
HDAC6-201ENST00000334136 OR7G2Q8NG99 324 aa10.8□□□□□ -0.68
HDAC6-201ENST00000334136 BPIFA2Q96DR5 249 aa10.8□□□□□ -0.68
HDAC6-201ENST00000334136 PITX2Q99697 317 aa10.8□□□□□ -0.68
HDAC6-201ENST00000334136 SEC61A2Q9H9S3 476 aa10.8□□□□□ -0.68
HDAC6-201ENST00000334136 RNF13O43567 381 aa10.79□□□□□ -0.68
HDAC6-201ENST00000334136 SIX6O95475 246 aa10.79□□□□□ -0.68
HDAC6-201ENST00000334136 ANKRD34CP0C6C1 535 aa10.79□□□□□ -0.68
HDAC6-201ENST00000334136 CD46P15529 392 aa10.79□□□□□ -0.68
HDAC6-201ENST00000334136 AKR1C4P17516 323 aa10.79□□□□□ -0.68
HDAC6-201ENST00000334136 HTR2AP28223 471 aa10.79□□□□□ -0.68
HDAC6-201ENST00000334136 DEFB109BQ30KR1 87 aa10.79□□□□□ -0.68
HDAC6-201ENST00000334136 HBMQ6B0K9 141 aa10.79□□□□□ -0.68
HDAC6-201ENST00000334136 PINK1Q9BXM7 581 aa10.79□□□□□ -0.68
HDAC6-201ENST00000334136 PILRAQ9UKJ1 303 aa10.79□□□□□ -0.68
HDAC6-201ENST00000334136 ZC3H12DA2A288 527 aaKnown RBP10.79□□□□□ -0.68
HDAC6-201ENST00000334136 F5H5P2 479 aa10.79□□□□□ -0.68
HDAC6-201ENST00000334136 SFTPBP07988 381 aa10.79□□□□□ -0.68
HDAC6-201ENST00000334136 TRAPPC2P0DI81 140 aa10.79□□□□□ -0.68
HDAC6-201ENST00000334136 TRAPPC2BP0DI82 140 aa10.79□□□□□ -0.68
HDAC6-201ENST00000334136 PSMB1P20618 241 aaKnown RBP10.79□□□□□ -0.68
HDAC6-201ENST00000334136 CSRP1P21291 193 aaKnown RBP10.79□□□□□ -0.68
HDAC6-201ENST00000334136 KCNJ5P48544 419 aa10.79□□□□□ -0.68
HDAC6-201ENST00000334136 PDSS1Q5T2R2 415 aa10.79□□□□□ -0.68
HDAC6-201ENST00000334136 EIF5AL1Q6IS14 154 aaKnown RBP10.79□□□□□ -0.68
HDAC6-201ENST00000334136 ARHGAP11AQ6P4F7 1023 aa10.79□□□□□ -0.68
HDAC6-201ENST00000334136 LANCL3Q6ZV70 420 aa10.79□□□□□ -0.68
HDAC6-201ENST00000334136 ZER1Q7Z7L7 766 aa10.79□□□□□ -0.68
HDAC6-201ENST00000334136 ZNF584Q8IVC4 421 aa10.79□□□□□ -0.68
HDAC6-201ENST00000334136 ZNF680Q8NEM1 530 aa10.79□□□□□ -0.68
HDAC6-201ENST00000334136 SYNPRQ8TBG9 265 aa10.79□□□□□ -0.68
HDAC6-201ENST00000334136 SEC22CQ9BRL7 303 aa10.79□□□□□ -0.68
HDAC6-201ENST00000334136 GSX2Q9BZM3 304 aa10.79□□□□□ -0.68
HDAC6-201ENST00000334136 B3GNT2Q9NY97 397 aa10.79□□□□□ -0.68
HDAC6-201ENST00000334136 IL32P24001 234 aa10.79□□□□□ -0.68
HDAC6-201ENST00000334136 CHAF1BQ13112 559 aa10.79□□□□□ -0.68
HDAC6-201ENST00000334136 ULK3Q6PHR2 472 aa10.79□□□□□ -0.68
HDAC6-201ENST00000334136 UBE3DQ7Z6J8 389 aa10.79□□□□□ -0.68
HDAC6-201ENST00000334136 CALHM3Q86XJ0 350 aa10.79□□□□□ -0.68
HDAC6-201ENST00000334136 OR13C2Q8NGS9 318 aa10.79□□□□□ -0.68
HDAC6-201ENST00000334136 CD300LFQ8TDQ1 290 aa10.79□□□□□ -0.68
HDAC6-201ENST00000334136 VOPP1Q96AW1 172 aa10.79□□□□□ -0.68
HDAC6-201ENST00000334136 TMEM38AQ9H6F2 299 aa10.79□□□□□ -0.68
HDAC6-201ENST00000334136 P4HTMQ9NXG6 502 aa10.79□□□□□ -0.68
HDAC6-201ENST00000334136 RBM7Q9Y580 266 aaKnown RBP10.79□□□□□ -0.68
HDAC6-201ENST00000334136 TRABD2BA6NFA1 517 aa10.78□□□□□ -0.68
HDAC6-201ENST00000334136 ZNF878C9JN71 531 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms