RNA–Protein interactions for RNA: ENST00000317968.8

PDLIM5-201, Transcript of PDZ and LIM domain 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDLIM5, Length 6,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-201ENST00000317968 ZNF91Q05481 1191 aa7.8□□□□□ -1.16
PDLIM5-201ENST00000317968 KLRB1Q12918 225 aa7.8□□□□□ -1.16
PDLIM5-201ENST00000317968 ZNF169Q14929 603 aaPredicted RBP7.8□□□□□ -1.16
PDLIM5-201ENST00000317968 KRTCAP3Q53RY4 240 aa7.8□□□□□ -1.16
PDLIM5-201ENST00000317968 PLCZ1Q86YW0 608 aa7.8□□□□□ -1.16
PDLIM5-201ENST00000317968 CPOQ8IVL8 374 aa7.8□□□□□ -1.16
PDLIM5-201ENST00000317968 NARS2Q96I59 477 aaKnown RBP7.8□□□□□ -1.16
PDLIM5-201ENST00000317968 QRSL1Q9H0R6 528 aaKnown RBP7.8□□□□□ -1.16
PDLIM5-201ENST00000317968 ABCB9Q9NP78 766 aa7.8□□□□□ -1.16
PDLIM5-201ENST00000317968 MMP25Q9NPA2 562 aa7.8□□□□□ -1.16
PDLIM5-201ENST00000317968 ANKRD10Q9NXR5 420 aa7.8□□□□□ -1.16
PDLIM5-201ENST00000317968 B3GALT5Q9Y2C3 310 aa7.8□□□□□ -1.16
PDLIM5-201ENST00000317968 SEMG1P04279 462 aa7.8□□□□□ -1.16
PDLIM5-201ENST00000317968 ANXA3P12429 323 aa7.8□□□□□ -1.16
PDLIM5-201ENST00000317968 CD1EP15812 388 aa7.8□□□□□ -1.16
PDLIM5-201ENST00000317968 HTR5AP47898 357 aa7.8□□□□□ -1.16
PDLIM5-201ENST00000317968 GABRA4P48169 554 aa7.8□□□□□ -1.16
PDLIM5-201ENST00000317968 ALDH3B2P48448 385 aa7.8□□□□□ -1.16
PDLIM5-201ENST00000317968 DSCR4P56555 118 aaPredicted RBP7.8□□□□□ -1.16
PDLIM5-201ENST00000317968 GMFBP60983 142 aa7.8□□□□□ -1.16
PDLIM5-201ENST00000317968 RNPS1Q15287 305 aaKnown RBP7.8□□□□□ -1.16
PDLIM5-201ENST00000317968 MMP27Q9H306 513 aa7.8□□□□□ -1.16
PDLIM5-201ENST00000317968 CMC2Q9NRP2 79 aa7.8□□□□□ -1.16
PDLIM5-201ENST00000317968 CHRNA9Q9UGM1 479 aa7.8□□□□□ -1.16
PDLIM5-201ENST00000317968 ZNF106Q9H2Y7 1883 aaKnown RBP7.8□□□□□ -1.16
PDLIM5-201ENST00000317968 G3V3Y1 287 aa7.8□□□□□ -1.16
PDLIM5-201ENST00000317968 APOFQ13790 326 aa7.8□□□□□ -1.16
PDLIM5-201ENST00000317968 NLRC3Q7RTR2 1065 aa7.8□□□□□ -1.16
PDLIM5-201ENST00000317968 ZNF321PQ8N8H1 164 aa7.8□□□□□ -1.16
PDLIM5-201ENST00000317968 OR52E2Q8NGJ4 325 aa7.8□□□□□ -1.16
PDLIM5-201ENST00000317968 ARSGQ96EG1 525 aa7.8□□□□□ -1.16
PDLIM5-201ENST00000317968 DNAJB12Q9NXW2 375 aaKnown RBP7.8□□□□□ -1.16
PDLIM5-201ENST00000317968 TOR1AO14656 332 aa7.8□□□□□ -1.16
PDLIM5-201ENST00000317968 DBTP11182 482 aaKnown RBP7.8□□□□□ -1.16
PDLIM5-201ENST00000317968 POU3F4P49335 361 aa7.8□□□□□ -1.16
PDLIM5-201ENST00000317968 RORCP51449 518 aa7.8□□□□□ -1.16
PDLIM5-201ENST00000317968 MLLT11Q13015 90 aaPredicted RBP7.8□□□□□ -1.16
PDLIM5-201ENST00000317968 SLC25A30Q5SVS4 291 aa7.8□□□□□ -1.16
PDLIM5-201ENST00000317968 C1orf140Q5VVS0 124 aa7.8□□□□□ -1.16
PDLIM5-201ENST00000317968 SLCO6A1Q86UG4 719 aa7.8□□□□□ -1.16
PDLIM5-201ENST00000317968 MKXQ8IYA7 352 aa7.8□□□□□ -1.16
PDLIM5-201ENST00000317968 PTPMT1Q8WUK0 201 aaPredicted RBP7.8□□□□□ -1.16
PDLIM5-201ENST00000317968 CDCA4Q9BXL8 241 aa7.8□□□□□ -1.16
PDLIM5-201ENST00000317968 ZNF442Q9H7R0 627 aa7.8□□□□□ -1.16
PDLIM5-201ENST00000317968 NIPAL2Q9H841 368 aa7.8□□□□□ -1.16
PDLIM5-201ENST00000317968 TMEFF2Q9UIK5 374 aaPredicted RBP7.8□□□□□ -1.16
PDLIM5-201ENST00000317968 IGKV3D-11A0A0A0MRZ8 115 aa7.79□□□□□ -1.16
PDLIM5-201ENST00000317968 FAM90A27PA6NNH2 459 aa7.79□□□□□ -1.16
PDLIM5-201ENST00000317968 NTN3O00634 580 aaPredicted RBP7.79□□□□□ -1.16
PDLIM5-201ENST00000317968 SYT7O43581 403 aa7.79□□□□□ -1.16
PDLIM5-201ENST00000317968 CNPY1Q3B7I2 92 aa7.79□□□□□ -1.16
PDLIM5-201ENST00000317968 ZNF615Q8N8J6 731 aa7.79□□□□□ -1.16
PDLIM5-201ENST00000317968 STEAP2Q8NFT2 490 aa7.79□□□□□ -1.16
PDLIM5-201ENST00000317968 OR51G2Q8NGK0 314 aa7.79□□□□□ -1.16
PDLIM5-201ENST00000317968 OR52N1Q8NH53 320 aa7.79□□□□□ -1.16
PDLIM5-201ENST00000317968 NIPSNAP1Q9BPW8 284 aa7.79□□□□□ -1.16
PDLIM5-201ENST00000317968 C12orf49Q9H741 205 aa7.79□□□□□ -1.16
PDLIM5-201ENST00000317968 MEPEQ9NQ76 525 aaPredicted RBP7.79□□□□□ -1.16
PDLIM5-201ENST00000317968 UNC13CQ8NB66 2214 aa7.79□□□□□ -1.16
PDLIM5-201ENST00000317968 TMEM129A0AVI4 362 aa7.79□□□□□ -1.16
PDLIM5-201ENST00000317968 C10orf142B7Z368 130 aa7.79□□□□□ -1.16
PDLIM5-201ENST00000317968 SSNA1O43805 119 aa7.79□□□□□ -1.16
PDLIM5-201ENST00000317968 ONECUT2O95948 504 aa7.79□□□□□ -1.16
PDLIM5-201ENST00000317968 OR2T7P0C7T2 308 aa7.79□□□□□ -1.16
PDLIM5-201ENST00000317968 SLC35A2P78381 396 aa7.79□□□□□ -1.16
PDLIM5-201ENST00000317968 POU3F1Q03052 451 aaPredicted RBP7.79□□□□□ -1.16
PDLIM5-201ENST00000317968 GXYLT1Q4G148 440 aa7.79□□□□□ -1.16
PDLIM5-201ENST00000317968 SLC35F1Q5T1Q4 408 aa7.79□□□□□ -1.16
PDLIM5-201ENST00000317968 SYT6Q5T7P8 510 aaPredicted RBP7.79□□□□□ -1.16
PDLIM5-201ENST00000317968 RTL6Q6ICC9 239 aa7.79□□□□□ -1.16
PDLIM5-201ENST00000317968 ZNF813Q6ZN06 617 aa7.79□□□□□ -1.16
PDLIM5-201ENST00000317968 B3GNT8Q7Z7M8 397 aa7.79□□□□□ -1.16
PDLIM5-201ENST00000317968 OR2T27Q8NH04 317 aa7.79□□□□□ -1.16
PDLIM5-201ENST00000317968 NDNFQ8TB73 568 aa7.79□□□□□ -1.16
PDLIM5-201ENST00000317968 TXNDC15Q96J42 360 aa7.79□□□□□ -1.16
PDLIM5-201ENST00000317968 MBOAT4Q96T53 435 aa7.79□□□□□ -1.16
PDLIM5-201ENST00000317968 KCNG2Q9UJ96 466 aa7.79□□□□□ -1.16
PDLIM5-201ENST00000317968 IER3IP1Q9Y5U9 82 aa7.79□□□□□ -1.16
PDLIM5-201ENST00000317968 A0A0X1KG70 313 aa7.79□□□□□ -1.16
PDLIM5-201ENST00000317968 PATE3B3GLJ2 98 aa7.79□□□□□ -1.16
PDLIM5-201ENST00000317968 DISC1C4P0D8 188 aa7.79□□□□□ -1.16
PDLIM5-201ENST00000317968 CLDN25C9JDP6 229 aa7.79□□□□□ -1.16
PDLIM5-201ENST00000317968 DNPH1O43598 174 aa7.79□□□□□ -1.16
PDLIM5-201ENST00000317968 PRKYO43930 277 aa7.79□□□□□ -1.16
PDLIM5-201ENST00000317968 TMEM127O75204 238 aa7.79□□□□□ -1.16
PDLIM5-201ENST00000317968 CT62P0C5K7 136 aa7.79□□□□□ -1.16
PDLIM5-201ENST00000317968 CNR1P21554 472 aa7.79□□□□□ -1.16
PDLIM5-201ENST00000317968 RPS4Y1P22090 263 aaKnown RBP7.79□□□□□ -1.16
PDLIM5-201ENST00000317968 OPRM1P35372 400 aa7.79□□□□□ -1.16
PDLIM5-201ENST00000317968 GPR50Q13585 617 aa7.79□□□□□ -1.16
PDLIM5-201ENST00000317968 C12orf73Q69YU5 71 aa7.79□□□□□ -1.16
PDLIM5-201ENST00000317968 FCRLBQ6BAA4 426 aa7.79□□□□□ -1.16
PDLIM5-201ENST00000317968 TBPL2Q6SJ96 375 aa7.79□□□□□ -1.16
PDLIM5-201ENST00000317968 TMEM205Q6UW68 189 aa7.79□□□□□ -1.16
PDLIM5-201ENST00000317968 CCDC36Q8IYA8 594 aa7.79□□□□□ -1.16
PDLIM5-201ENST00000317968 CMTM4Q8IZR5 234 aa7.79□□□□□ -1.16
PDLIM5-201ENST00000317968 CPNE4Q96A23 557 aaPredicted RBP7.79□□□□□ -1.16
PDLIM5-201ENST00000317968 PFDN2Q9UHV9 154 aa7.79□□□□□ -1.16
PDLIM5-201ENST00000317968 CROCCQ5TZA2 2017 aa7.79□□□□□ -1.16
PDLIM5-201ENST00000317968 OR5H15A6NDH6 313 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms