RNA–Protein interactions for RNA: ENST00000274030.10

USP53-201, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP53, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-201ENST00000274030 SDHAF2Q9NX18 166 aa10.57□□□□□ -0.72
USP53-201ENST00000274030 SLC22A23A1A5C7 686 aa10.57□□□□□ -0.72
USP53-201ENST00000274030 IGFBP1P08833 259 aaPredicted RBP10.57□□□□□ -0.72
USP53-201ENST00000274030 KITLGP21583 273 aa10.57□□□□□ -0.72
USP53-201ENST00000274030 CD1CP29017 333 aa10.57□□□□□ -0.72
USP53-201ENST00000274030 ADPRHP54922 357 aa10.57□□□□□ -0.72
USP53-201ENST00000274030 EDDM3BP56851 147 aa10.57□□□□□ -0.72
USP53-201ENST00000274030 GABREP78334 506 aa10.57□□□□□ -0.72
USP53-201ENST00000274030 RBMS2Q15434 407 aaKnown RBP10.57□□□□□ -0.72
USP53-201ENST00000274030 MRPL41Q8IXM3 137 aaKnown RBP10.57□□□□□ -0.72
USP53-201ENST00000274030 CELF2-AS1Q8N7Q2 184 aa10.57□□□□□ -0.72
USP53-201ENST00000274030 FAM71CQ8NEG0 241 aa10.57□□□□□ -0.72
USP53-201ENST00000274030 TMEM174Q8WUU8 243 aa10.57□□□□□ -0.72
USP53-201ENST00000274030 SLC25A31Q9H0C2 315 aa10.57□□□□□ -0.72
USP53-201ENST00000274030 ZNF355PQ9NSJ1 428 aa10.57□□□□□ -0.72
USP53-201ENST00000274030 MED17Q9NVC6 651 aa10.57□□□□□ -0.72
USP53-201ENST00000274030 ATPIF1Q9UII2 106 aa10.57□□□□□ -0.72
USP53-201ENST00000274030 K7EPK0 472 aa10.57□□□□□ -0.72
USP53-201ENST00000274030 PSMB1P20618 241 aaKnown RBP10.57□□□□□ -0.72
USP53-201ENST00000274030 M6PRP20645 277 aa10.57□□□□□ -0.72
USP53-201ENST00000274030 CHATP28329 748 aa10.57□□□□□ -0.72
USP53-201ENST00000274030 RBPJQ06330 500 aa10.57□□□□□ -0.72
USP53-201ENST00000274030 EBPQ15125 230 aaKnown RBP10.57□□□□□ -0.72
USP53-201ENST00000274030 TMEM52BQ4KMG9 183 aa10.57□□□□□ -0.72
USP53-201ENST00000274030 METRNLQ641Q3 311 aa10.57□□□□□ -0.72
USP53-201ENST00000274030 PRSS45Q7RTY3 260 aa10.57□□□□□ -0.72
USP53-201ENST00000274030 FAM71E2Q8N5Q1 922 aa10.57□□□□□ -0.72
USP53-201ENST00000274030 ASB16Q96NS5 453 aa10.57□□□□□ -0.72
USP53-201ENST00000274030 NT5DC2Q9H857 520 aa10.57□□□□□ -0.72
USP53-201ENST00000274030 CGGBP1Q9UFW8 167 aaPredicted RBP10.57□□□□□ -0.72
USP53-201ENST00000274030 GPR160Q9UJ42 338 aa10.57□□□□□ -0.72
USP53-201ENST00000274030 TMEM184BQ9Y519 407 aaPredicted RBP10.57□□□□□ -0.72
USP53-201ENST00000274030 TPOP07202 933 aa10.57□□□□□ -0.72
USP53-201ENST00000274030 CD14P08571 375 aa10.57□□□□□ -0.72
USP53-201ENST00000274030 MTHFD2P13995 350 aa10.57□□□□□ -0.72
USP53-201ENST00000274030 LIPAP38571 399 aa10.57□□□□□ -0.72
USP53-201ENST00000274030 MANEAQ5SRI9 462 aa10.57□□□□□ -0.72
USP53-201ENST00000274030 PELI3Q8N2H9 469 aa10.57□□□□□ -0.72
USP53-201ENST00000274030 CCL4L1Q8NHW4 92 aa10.57□□□□□ -0.72
USP53-201ENST00000274030 MSI2Q96DH6 328 aaKnown RBP10.57□□□□□ -0.72
USP53-201ENST00000274030 RBMXL1Q96E39 390 aaKnown RBP10.57□□□□□ -0.72
USP53-201ENST00000274030 OCSTAMPQ9BR26 566 aa10.57□□□□□ -0.72
USP53-201ENST00000274030 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.57□□□□□ -0.72
USP53-201ENST00000274030 TMEM30AQ9NV96 361 aa10.57□□□□□ -0.72
USP53-201ENST00000274030 COA3Q9Y2R0 106 aaPredicted RBP10.57□□□□□ -0.72
USP53-201ENST00000274030 ASB1Q9Y576 335 aa10.57□□□□□ -0.72
USP53-201ENST00000274030 MSTNO14793 375 aa10.56□□□□□ -0.72
USP53-201ENST00000274030 GPR137BO60478 399 aa10.56□□□□□ -0.72
USP53-201ENST00000274030 NXPH2O95156 264 aa10.56□□□□□ -0.72
USP53-201ENST00000274030 NSA2O95478 260 aaKnown RBP10.56□□□□□ -0.72
USP53-201ENST00000274030 UBBP0CG47 229 aa10.56□□□□□ -0.72
USP53-201ENST00000274030 UBCP0CG48 685 aaKnown RBP10.56□□□□□ -0.72
USP53-201ENST00000274030 HTR1FP30939 366 aa10.56□□□□□ -0.72
USP53-201ENST00000274030 ZNF93P35789 620 aaPredicted RBP10.56□□□□□ -0.72
USP53-201ENST00000274030 RACK1P63244 317 aaKnown RBP10.56□□□□□ -0.72
USP53-201ENST00000274030 SCGB2A2Q13296 93 aa10.56□□□□□ -0.72
USP53-201ENST00000274030 SUMF1Q8NBK3 374 aa10.56□□□□□ -0.72
USP53-201ENST00000274030 OR56B4Q8NH76 319 aa10.56□□□□□ -0.72
USP53-201ENST00000274030 OR2M2Q96R28 347 aa10.56□□□□□ -0.72
USP53-201ENST00000274030 BOLA1Q9Y3E2 137 aa10.56□□□□□ -0.72
USP53-201ENST00000274030 NUP98P52948 1817 aa10.56□□□□□ -0.72
USP53-201ENST00000274030 NRXN3Q9Y4C0 1643 aa10.56□□□□□ -0.72
USP53-201ENST00000274030 GRPP07492 148 aa10.56□□□□□ -0.72
USP53-201ENST00000274030 CALCBP10092 127 aa10.56□□□□□ -0.72
USP53-201ENST00000274030 SNCAP37840 140 aa10.56□□□□□ -0.72
USP53-201ENST00000274030 ALKBH1Q13686 389 aaKnown RBP10.56□□□□□ -0.72
USP53-201ENST00000274030 EDDM3AQ14507 147 aa10.56□□□□□ -0.72
USP53-201ENST00000274030 DPY19L2P2Q6ZN68 376 aa10.56□□□□□ -0.72
USP53-201ENST00000274030 SLC46A3Q7Z3Q1 461 aa10.56□□□□□ -0.72
USP53-201ENST00000274030 TMEM217Q8N7C4 229 aa10.56□□□□□ -0.72
USP53-201ENST00000274030 H1FXQ92522 213 aaKnown RBP10.56□□□□□ -0.72
USP53-201ENST00000274030 KIR3DX1Q9H7L2 352 aa10.56□□□□□ -0.72
USP53-201ENST00000274030 WSB2Q9NYS7 404 aaPredicted RBP10.56□□□□□ -0.72
USP53-201ENST00000274030 SCN11AQ9UI33 1791 aa10.56□□□□□ -0.72
USP53-201ENST00000274030 C5P01031 1676 aa10.56□□□□□ -0.72
USP53-201ENST00000274030 B4GALT3O60512 393 aa10.56□□□□□ -0.72
USP53-201ENST00000274030 ALOX12BO75342 701 aa10.56□□□□□ -0.72
USP53-201ENST00000274030 CR2P20023 1033 aa10.56□□□□□ -0.72
USP53-201ENST00000274030 F2RL1P55085 397 aa10.56□□□□□ -0.72
USP53-201ENST00000274030 VWA2Q5GFL6 755 aa10.56□□□□□ -0.72
USP53-201ENST00000274030 P2RY12Q9H244 342 aa10.56□□□□□ -0.72
USP53-201ENST00000274030 CRYBG1Q9Y4K1 1723 aa10.56□□□□□ -0.72
USP53-201ENST00000274030 CACNA1CQ13936 2221 aa10.56□□□□□ -0.72
USP53-201ENST00000274030 GLSO94925 669 aaPredicted RBP10.56□□□□□ -0.72
USP53-201ENST00000274030 GPX2P18283 190 aa10.56□□□□□ -0.72
USP53-201ENST00000274030 PRKACBP22694 351 aa10.56□□□□□ -0.72
USP53-201ENST00000274030 PPT1P50897 306 aa10.56□□□□□ -0.72
USP53-201ENST00000274030 CLINT1Q14677 625 aa10.56□□□□□ -0.72
USP53-201ENST00000274030 MSMO1Q15800 293 aa10.56□□□□□ -0.72
USP53-201ENST00000274030 KCNJ8Q15842 424 aa10.56□□□□□ -0.72
USP53-201ENST00000274030 OTPQ5XKR4 325 aa10.56□□□□□ -0.72
USP53-201ENST00000274030 SIAH3Q8IW03 269 aa10.56□□□□□ -0.72
USP53-201ENST00000274030 PIGQQ9BRB3 760 aa10.56□□□□□ -0.72
USP53-201ENST00000274030 DIMT1Q9UNQ2 313 aaKnown RBP10.56□□□□□ -0.72
USP53-201ENST00000274030 RGPD5Q99666 1765 aa10.56□□□□□ -0.72
USP53-201ENST00000274030 GPR176Q14439 515 aa10.56□□□□□ -0.72
USP53-201ENST00000274030 ADPRMQ3LIE5 342 aa10.56□□□□□ -0.72
USP53-201ENST00000274030 C1orf140Q5VVS0 124 aa10.56□□□□□ -0.72
USP53-201ENST00000274030 SAT2Q96F10 170 aaPredicted RBP10.56□□□□□ -0.72
USP53-201ENST00000274030 ZDHHC5Q9C0B5 715 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms