RNA–Protein interactions for RNA: ENST00000263121.11

SMARCB1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,690 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-201ENST00000263121 ZNF701M0R085 212 aaPredicted RBP20.48■□□□□ 0.87
SMARCB1-201ENST00000263121 MYL12BO14950 172 aa20.48■□□□□ 0.87
SMARCB1-201ENST00000263121 SEC14L5O43304 696 aa20.48■□□□□ 0.87
SMARCB1-201ENST00000263121 EIF1BO60739 113 aaKnown RBP20.48■□□□□ 0.87
SMARCB1-201ENST00000263121 TRMUO75648 421 aaKnown RBP20.48■□□□□ 0.87
SMARCB1-201ENST00000263121 CELA3AP09093 270 aa20.48■□□□□ 0.87
SMARCB1-201ENST00000263121 KLK2P20151 261 aa20.48■□□□□ 0.87
SMARCB1-201ENST00000263121 CLDN20P56880 219 aa20.48■□□□□ 0.87
SMARCB1-201ENST00000263121 RAP1BP61224 184 aa20.48■□□□□ 0.87
SMARCB1-201ENST00000263121 RAP1AP62834 184 aa20.48■□□□□ 0.87
SMARCB1-201ENST00000263121 MED22Q15528 200 aa20.48■□□□□ 0.87
SMARCB1-201ENST00000263121 FAM205BPQ63HN1 556 aa20.48■□□□□ 0.87
SMARCB1-201ENST00000263121 PNPLA5Q7Z6Z6 429 aaPredicted RBP20.48■□□□□ 0.87
SMARCB1-201ENST00000263121 ISOC1Q96CN7 298 aa20.48■□□□□ 0.87
SMARCB1-201ENST00000263121 TSSK2Q96PF2 358 aa20.48■□□□□ 0.87
SMARCB1-201ENST00000263121 FUNDC2Q9BWH2 189 aa20.48■□□□□ 0.87
SMARCB1-201ENST00000263121 NAA50Q9GZZ1 169 aaKnown RBP20.48■□□□□ 0.87
SMARCB1-201ENST00000263121 SYT4Q9H2B2 425 aa20.48■□□□□ 0.87
SMARCB1-201ENST00000263121 CHCHD3Q9NX63 227 aaKnown RBP20.48■□□□□ 0.87
SMARCB1-201ENST00000263121 ERVK13-1Q9NX77 482 aa20.48■□□□□ 0.87
SMARCB1-201ENST00000263121 QPCTLQ9NXS2 382 aa20.48■□□□□ 0.87
SMARCB1-201ENST00000263121 NPIPA1Q9UND3 350 aa20.48■□□□□ 0.87
SMARCB1-201ENST00000263121 MOKQ9UQ07 419 aa20.48■□□□□ 0.87
SMARCB1-201ENST00000263121 DCTN6O00399 190 aa20.48■□□□□ 0.87
SMARCB1-201ENST00000263121 TNFSF11O14788 317 aa20.48■□□□□ 0.87
SMARCB1-201ENST00000263121 DNPH1O43598 174 aa20.48■□□□□ 0.87
SMARCB1-201ENST00000263121 BCL10O95999 233 aa20.48■□□□□ 0.87
SMARCB1-201ENST00000263121 TGFBR2P37173 567 aa20.48■□□□□ 0.87
SMARCB1-201ENST00000263121 SPHARQ15513 63 aa20.48■□□□□ 0.87
SMARCB1-201ENST00000263121 CNPY1Q3B7I2 92 aa20.48■□□□□ 0.87
SMARCB1-201ENST00000263121 PM20D2Q8IYS1 436 aa20.48■□□□□ 0.87
SMARCB1-201ENST00000263121 ACBD7Q8N6N7 88 aa20.48■□□□□ 0.87
SMARCB1-201ENST00000263121 POMGNT2Q8NAT1 580 aa20.48■□□□□ 0.87
SMARCB1-201ENST00000263121 OR2T4Q8NH00 348 aa20.48■□□□□ 0.87
SMARCB1-201ENST00000263121 ADGRG7Q96K78 797 aa20.48■□□□□ 0.87
SMARCB1-201ENST00000263121 OXGR1Q96P68 337 aa20.48■□□□□ 0.87
SMARCB1-201ENST00000263121 DOK1Q99704 481 aa20.48■□□□□ 0.87
SMARCB1-201ENST00000263121 MED12Q93074 2177 aa20.47■□□□□ 0.87
SMARCB1-201ENST00000263121 CNTRLQ7Z7A1 2325 aa20.47■□□□□ 0.87
SMARCB1-201ENST00000263121 C12orf71A8MTZ7 269 aa20.47■□□□□ 0.87
SMARCB1-201ENST00000263121 H0YC42 278 aa20.47■□□□□ 0.87
SMARCB1-201ENST00000263121 RAMP1O60894 148 aa20.47■□□□□ 0.87
SMARCB1-201ENST00000263121 MRPL3P09001 348 aaKnown RBP20.47■□□□□ 0.87
SMARCB1-201ENST00000263121 POU3F2P20265 443 aaPredicted RBP20.47■□□□□ 0.87
SMARCB1-201ENST00000263121 PYCR1P32322 319 aa20.47■□□□□ 0.87
SMARCB1-201ENST00000263121 LIPAP38571 399 aa20.47■□□□□ 0.87
SMARCB1-201ENST00000263121 TMBIM6P55061 237 aa20.47■□□□□ 0.87
SMARCB1-201ENST00000263121 RUNX1T1Q06455 604 aa20.47■□□□□ 0.87
SMARCB1-201ENST00000263121 EEF1A1P5Q5VTE0 462 aa20.47■□□□□ 0.87
SMARCB1-201ENST00000263121 ESPNLQ6ZVH7 1005 aa20.47■□□□□ 0.87
SMARCB1-201ENST00000263121 ASB18Q6ZVZ8 466 aa20.47■□□□□ 0.87
SMARCB1-201ENST00000263121 LHFPL3Q86UP9 236 aa20.47■□□□□ 0.87
SMARCB1-201ENST00000263121 WDFY1Q8IWB7 410 aa20.47■□□□□ 0.87
SMARCB1-201ENST00000263121 UEVLDQ8IX04 471 aa20.47■□□□□ 0.87
SMARCB1-201ENST00000263121 OR6V1Q8N148 313 aa20.47■□□□□ 0.87
SMARCB1-201ENST00000263121 TXNDC15Q96J42 360 aa20.47■□□□□ 0.87
SMARCB1-201ENST00000263121 MGLLQ99685 303 aa20.47■□□□□ 0.87
SMARCB1-201ENST00000263121 ALG12Q9BV10 488 aa20.47■□□□□ 0.87
SMARCB1-201ENST00000263121 RACGAP1Q9H0H5 632 aa20.47■□□□□ 0.87
SMARCB1-201ENST00000263121 INPP5EQ9NRR6 644 aa20.47■□□□□ 0.87
SMARCB1-201ENST00000263121 MED29Q9NX70 200 aa20.47■□□□□ 0.87
SMARCB1-201ENST00000263121 DKK4Q9UBT3 224 aa20.47■□□□□ 0.87
SMARCB1-201ENST00000263121 RASD1Q9Y272 281 aa20.47■□□□□ 0.87
SMARCB1-201ENST00000263121 SLC22A23A1A5C7 686 aa20.46■□□□□ 0.87
SMARCB1-201ENST00000263121 TRAF3IP2O43734 574 aaPredicted RBP20.46■□□□□ 0.87
SMARCB1-201ENST00000263121 STARP49675 285 aa20.46■□□□□ 0.87
SMARCB1-201ENST00000263121 AGFG1P52594 562 aaKnown RBP20.46■□□□□ 0.87
SMARCB1-201ENST00000263121 RAC3P60763 192 aa20.46■□□□□ 0.87
SMARCB1-201ENST00000263121 PPIAP62937 165 aaKnown RBP20.46■□□□□ 0.87
SMARCB1-201ENST00000263121 ARMCX4Q5H9R4 360 aa20.46■□□□□ 0.87
SMARCB1-201ENST00000263121 TMEM225Q6GV28 225 aa20.46■□□□□ 0.87
SMARCB1-201ENST00000263121 ZBTB46Q86UZ6 589 aa20.46■□□□□ 0.87
SMARCB1-201ENST00000263121 SLC22A16Q86VW1 577 aa20.46■□□□□ 0.87
SMARCB1-201ENST00000263121 ANKRD13BQ86YJ7 626 aa20.46■□□□□ 0.87
SMARCB1-201ENST00000263121 ZNF485Q8NCK3 441 aa20.46■□□□□ 0.87
SMARCB1-201ENST00000263121 OR6K6Q8NGW6 343 aa20.46■□□□□ 0.87
SMARCB1-201ENST00000263121 CNN2Q99439 309 aaKnown RBP20.46■□□□□ 0.87
SMARCB1-201ENST00000263121 NAA11Q9BSU3 229 aaPredicted RBP20.46■□□□□ 0.87
SMARCB1-201ENST00000263121 SRXN1Q9BYN0 137 aa20.46■□□□□ 0.87
SMARCB1-201ENST00000263121 SRA1Q9HD15 236 aaKnown RBP20.46■□□□□ 0.87
SMARCB1-201ENST00000263121 FKBP7Q9Y680 259 aa20.46■□□□□ 0.87
SMARCB1-201ENST00000263121 EIF1AYO14602 144 aaKnown RBP20.45■□□□□ 0.86
SMARCB1-201ENST00000263121 SUCLG1P53597 346 aaKnown RBP20.45■□□□□ 0.86
SMARCB1-201ENST00000263121 WNT4P56705 351 aa20.45■□□□□ 0.86
SMARCB1-201ENST00000263121 CLDN15P56746 228 aa20.45■□□□□ 0.86
SMARCB1-201ENST00000263121 C1DQ13901 141 aaKnown RBP20.45■□□□□ 0.86
SMARCB1-201ENST00000263121 OR2G6Q5TZ20 316 aa20.45■□□□□ 0.86
SMARCB1-201ENST00000263121 SLC16A12Q6ZSM3 486 aa20.45■□□□□ 0.86
SMARCB1-201ENST00000263121 SPACA3Q8IXA5 215 aa20.45■□□□□ 0.86
SMARCB1-201ENST00000263121 OPALINQ96PE5 141 aa20.45■□□□□ 0.86
SMARCB1-201ENST00000263121 KCNK17Q96T54 332 aa20.45■□□□□ 0.86
SMARCB1-201ENST00000263121 NUAK2Q9H093 628 aa20.45■□□□□ 0.86
SMARCB1-201ENST00000263121 ENPP5Q9UJA9 477 aa20.45■□□□□ 0.86
SMARCB1-201ENST00000263121 TFP02787 698 aa20.45■□□□□ 0.86
SMARCB1-201ENST00000263121 CD79BP40259 229 aa20.45■□□□□ 0.86
SMARCB1-201ENST00000263121 ACTC1P68032 377 aa20.45■□□□□ 0.86
SMARCB1-201ENST00000263121 ACTA1P68133 377 aa20.45■□□□□ 0.86
SMARCB1-201ENST00000263121 HBMQ6B0K9 141 aa20.45■□□□□ 0.86
SMARCB1-201ENST00000263121 GPAT4Q86UL3 456 aa20.45■□□□□ 0.86
SMARCB1-201ENST00000263121 FAM109AQ8N4B1 249 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms