RNA–Protein interactions for RNA: ENST00000262640.11

VAMP7-201, Transcript of vesicle associated membrane protein 7, humanhuman

TSL 1 (best) BASIC

Gene VAMP7, Length 2,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP7-201ENST00000262640 RFC3P40938 356 aa11.65□□□□□ -0.54
VAMP7-201ENST00000262640 LCN6P62502 163 aa11.65□□□□□ -0.54
VAMP7-201ENST00000262640 MELKQ14680 651 aa11.65□□□□□ -0.54
VAMP7-201ENST00000262640 SPHARQ15513 63 aa11.65□□□□□ -0.54
VAMP7-201ENST00000262640 CNPY1Q3B7I2 92 aa11.65□□□□□ -0.54
VAMP7-201ENST00000262640 SLC22A16Q86VW1 577 aa11.65□□□□□ -0.54
VAMP7-201ENST00000262640 TMEM251Q8N6I4 163 aa11.65□□□□□ -0.54
VAMP7-201ENST00000262640 ZMYND19Q96E35 227 aaPredicted RBP11.65□□□□□ -0.54
VAMP7-201ENST00000262640 YIPF6Q96EC8 236 aa11.65□□□□□ -0.54
VAMP7-201ENST00000262640 OXGR1Q96P68 337 aa11.65□□□□□ -0.54
VAMP7-201ENST00000262640 CNN2Q99439 309 aaKnown RBP11.65□□□□□ -0.54
VAMP7-201ENST00000262640 FUNDC2Q9BWH2 189 aa11.65□□□□□ -0.54
VAMP7-201ENST00000262640 FAM166BA8MTA8 275 aa11.65□□□□□ -0.54
VAMP7-201ENST00000262640 TNFSF11O14788 317 aa11.65□□□□□ -0.54
VAMP7-201ENST00000262640 ACTC1P68032 377 aa11.65□□□□□ -0.54
VAMP7-201ENST00000262640 ACTA1P68133 377 aa11.65□□□□□ -0.54
VAMP7-201ENST00000262640 H3F3AP84243 136 aa11.65□□□□□ -0.54
VAMP7-201ENST00000262640 DBPQ10586 325 aaPredicted RBP11.65□□□□□ -0.54
VAMP7-201ENST00000262640 TMEM225Q6GV28 225 aa11.65□□□□□ -0.54
VAMP7-201ENST00000262640 ESPNLQ6ZVH7 1005 aa11.65□□□□□ -0.54
VAMP7-201ENST00000262640 HDDC2Q7Z4H3 204 aa11.65□□□□□ -0.54
VAMP7-201ENST00000262640 OR51L1Q8NGJ5 315 aa11.65□□□□□ -0.54
VAMP7-201ENST00000262640 OR6K6Q8NGW6 343 aa11.65□□□□□ -0.54
VAMP7-201ENST00000262640 ZHX1-C8orf76Q96EF9 292 aa11.65□□□□□ -0.54
VAMP7-201ENST00000262640 MGLLQ99685 303 aa11.65□□□□□ -0.54
VAMP7-201ENST00000262640 SMAD5Q99717 465 aaKnown RBP11.65□□□□□ -0.54
VAMP7-201ENST00000262640 ALG12Q9BV10 488 aa11.65□□□□□ -0.54
VAMP7-201ENST00000262640 SYT4Q9H2B2 425 aa11.65□□□□□ -0.54
VAMP7-201ENST00000262640 ERVK13-1Q9NX77 482 aa11.65□□□□□ -0.54
VAMP7-201ENST00000262640 SSUH2Q9Y2M2 353 aa11.65□□□□□ -0.54
VAMP7-201ENST00000262640 PCDHGB7Q9Y5F8 929 aa11.65□□□□□ -0.54
VAMP7-201ENST00000262640 FKBP7Q9Y680 259 aa11.65□□□□□ -0.54
VAMP7-201ENST00000262640 C12orf71A8MTZ7 269 aa11.64□□□□□ -0.55
VAMP7-201ENST00000262640 ACOT7O00154 380 aa11.64□□□□□ -0.55
VAMP7-201ENST00000262640 VAMP5O95183 116 aa11.64□□□□□ -0.55
VAMP7-201ENST00000262640 MRPL3P09001 348 aaKnown RBP11.64□□□□□ -0.55
VAMP7-201ENST00000262640 MAGEA5P43359 124 aa11.64□□□□□ -0.55
VAMP7-201ENST00000262640 WNT4P56705 351 aa11.64□□□□□ -0.55
VAMP7-201ENST00000262640 PPIAP62937 165 aaKnown RBP11.64□□□□□ -0.55
VAMP7-201ENST00000262640 ARMCX4Q5H9R4 360 aa11.64□□□□□ -0.55
VAMP7-201ENST00000262640 LINC01590Q5TEZ4 76 aa11.64□□□□□ -0.55
VAMP7-201ENST00000262640 EEF1A1P5Q5VTE0 462 aa11.64□□□□□ -0.55
VAMP7-201ENST00000262640 NHLRC1Q6VVB1 395 aa11.64□□□□□ -0.55
VAMP7-201ENST00000262640 ASB18Q6ZVZ8 466 aa11.64□□□□□ -0.55
VAMP7-201ENST00000262640 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.64□□□□□ -0.55
VAMP7-201ENST00000262640 LHFPL3Q86UP9 236 aa11.64□□□□□ -0.55
VAMP7-201ENST00000262640 GGNQ86UU5 652 aa11.64□□□□□ -0.55
VAMP7-201ENST00000262640 ANKRD13BQ86YJ7 626 aa11.64□□□□□ -0.55
VAMP7-201ENST00000262640 PM20D2Q8IYS1 436 aa11.64□□□□□ -0.55
VAMP7-201ENST00000262640 KLHL36Q8N4N3 616 aa11.64□□□□□ -0.55
VAMP7-201ENST00000262640 OR52N1Q8NH53 320 aa11.64□□□□□ -0.55
VAMP7-201ENST00000262640 RAB2BQ8WUD1 216 aa11.64□□□□□ -0.55
VAMP7-201ENST00000262640 DOK1Q99704 481 aa11.64□□□□□ -0.55
VAMP7-201ENST00000262640 DAPL1A0PJW8 107 aa11.64□□□□□ -0.55
VAMP7-201ENST00000262640 SLC22A23A1A5C7 686 aa11.64□□□□□ -0.55
VAMP7-201ENST00000262640 ZNF814B7Z6K7 855 aa11.64□□□□□ -0.55
VAMP7-201ENST00000262640 EIF1AYO14602 144 aaKnown RBP11.64□□□□□ -0.55
VAMP7-201ENST00000262640 AHCYL1O43865 530 aa11.64□□□□□ -0.55
VAMP7-201ENST00000262640 HSMCR30P0CW71 290 aa11.64□□□□□ -0.55
VAMP7-201ENST00000262640 PYCR1P32322 319 aa11.64□□□□□ -0.55
VAMP7-201ENST00000262640 TGFBR2P37173 567 aa11.64□□□□□ -0.55
VAMP7-201ENST00000262640 LIPAP38571 399 aa11.64□□□□□ -0.55
VAMP7-201ENST00000262640 AGFG1P52594 562 aaKnown RBP11.64□□□□□ -0.55
VAMP7-201ENST00000262640 CLDN20P56880 219 aa11.64□□□□□ -0.55
VAMP7-201ENST00000262640 RAC3P60763 192 aa11.64□□□□□ -0.55
VAMP7-201ENST00000262640 PDSS1Q5T2R2 415 aa11.64□□□□□ -0.55
VAMP7-201ENST00000262640 HBMQ6B0K9 141 aa11.64□□□□□ -0.55
VAMP7-201ENST00000262640 OR6V1Q8N148 313 aa11.64□□□□□ -0.55
VAMP7-201ENST00000262640 OR10H4Q8NGA5 316 aa11.64□□□□□ -0.55
VAMP7-201ENST00000262640 OR2V1Q8NHB1 315 aa11.64□□□□□ -0.55
VAMP7-201ENST00000262640 ZNRF4Q8WWF5 429 aa11.64□□□□□ -0.55
VAMP7-201ENST00000262640 TSSK2Q96PF2 358 aa11.64□□□□□ -0.55
VAMP7-201ENST00000262640 ZNF649Q9BS31 505 aa11.64□□□□□ -0.55
VAMP7-201ENST00000262640 MFRPQ9BY79 579 aa11.64□□□□□ -0.55
VAMP7-201ENST00000262640 SRA1Q9HD15 236 aaKnown RBP11.64□□□□□ -0.55
VAMP7-201ENST00000262640 DKK4Q9UBT3 224 aa11.64□□□□□ -0.55
VAMP7-201ENST00000262640 ENPP5Q9UJA9 477 aa11.64□□□□□ -0.55
VAMP7-201ENST00000262640 TRAV17A0A0B4J275 112 aa11.63□□□□□ -0.55
VAMP7-201ENST00000262640 TRAF3IP2O43734 574 aaPredicted RBP11.63□□□□□ -0.55
VAMP7-201ENST00000262640 CELA3AP09093 270 aa11.63□□□□□ -0.55
VAMP7-201ENST00000262640 CD36P16671 472 aa11.63□□□□□ -0.55
VAMP7-201ENST00000262640 ZNF43P17038 809 aa11.63□□□□□ -0.55
VAMP7-201ENST00000262640 CENPAP49450 140 aa11.63□□□□□ -0.55
VAMP7-201ENST00000262640 CARD18P57730 90 aa11.63□□□□□ -0.55
VAMP7-201ENST00000262640 MLLT11Q13015 90 aaPredicted RBP11.63□□□□□ -0.55
VAMP7-201ENST00000262640 TMPRSS11AQ6ZMR5 421 aa11.63□□□□□ -0.55
VAMP7-201ENST00000262640 GPAT4Q86UL3 456 aa11.63□□□□□ -0.55
VAMP7-201ENST00000262640 ZBTB46Q86UZ6 589 aa11.63□□□□□ -0.55
VAMP7-201ENST00000262640 P2RY8Q86VZ1 359 aa11.63□□□□□ -0.55
VAMP7-201ENST00000262640 FAM109AQ8N4B1 249 aa11.63□□□□□ -0.55
VAMP7-201ENST00000262640 TM9SF4Q92544 642 aa11.63□□□□□ -0.55
VAMP7-201ENST00000262640 C12orf43Q96C57 262 aaKnown RBP11.63□□□□□ -0.55
VAMP7-201ENST00000262640 TXNDC15Q96J42 360 aa11.63□□□□□ -0.55
VAMP7-201ENST00000262640 ADGRG7Q96K78 797 aa11.63□□□□□ -0.55
VAMP7-201ENST00000262640 BCL7BQ9BQE9 202 aa11.63□□□□□ -0.55
VAMP7-201ENST00000262640 NAA50Q9GZZ1 169 aaKnown RBP11.63□□□□□ -0.55
VAMP7-201ENST00000262640 NUAK2Q9H093 628 aa11.63□□□□□ -0.55
VAMP7-201ENST00000262640 ISYNA1Q9NPH2 558 aa11.63□□□□□ -0.55
VAMP7-201ENST00000262640 MED29Q9NX70 200 aa11.63□□□□□ -0.55
VAMP7-201ENST00000262640 CAB39Q9Y376 341 aaPredicted RBP11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms