RNA–Protein interactions for RNA: ENST00000243082.4

HOXC11-201, Transcript of homeobox C11, humanhuman

TSL 3 BASIC

Gene HOXC11, Length 2,039 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-201ENST00000243082 DEFA3P59666 94 aa16.66■□□□□ 0.26
HOXC11-201ENST00000243082 INPP5JQ15735 1006 aaPredicted RBP16.66■□□□□ 0.26
HOXC11-201ENST00000243082 HBMQ6B0K9 141 aa16.66■□□□□ 0.26
HOXC11-201ENST00000243082 MZT2AQ6P582 158 aa16.66■□□□□ 0.26
HOXC11-201ENST00000243082 CADM3Q8N126 398 aa16.66■□□□□ 0.26
HOXC11-201ENST00000243082 OR2Y1Q8NGV0 311 aa16.66■□□□□ 0.26
HOXC11-201ENST00000243082 MFSD8Q8NHS3 518 aa16.66■□□□□ 0.26
HOXC11-201ENST00000243082 SNX18Q96RF0 628 aa16.66■□□□□ 0.26
HOXC11-201ENST00000243082 WDR76Q9H967 626 aa16.66■□□□□ 0.26
HOXC11-201ENST00000243082 MRM2Q9UI43 246 aaKnown RBP16.66■□□□□ 0.26
HOXC11-201ENST00000243082 MS4A18H0YCH9 400 aa16.65■□□□□ 0.26
HOXC11-201ENST00000243082 ZNF208O43345 1280 aa16.65■□□□□ 0.26
HOXC11-201ENST00000243082 HNRNPCP07910 306 aaKnown RBP eCLIP16.65■□□□□ 0.26
HOXC11-201ENST00000243082 EVX1P49640 407 aa16.65■□□□□ 0.26
HOXC11-201ENST00000243082 OR10A3P58181 314 aa16.65■□□□□ 0.26
HOXC11-201ENST00000243082 NANOS3P60323 173 aaKnown RBP16.65■□□□□ 0.26
HOXC11-201ENST00000243082 INSM1Q01101 510 aaPredicted RBP16.65■□□□□ 0.26
HOXC11-201ENST00000243082 ANGPT1Q15389 498 aa16.65■□□□□ 0.26
HOXC11-201ENST00000243082 MS4A18Q3C1V0 323 aa16.65■□□□□ 0.26
HOXC11-201ENST00000243082 SLC25A53Q5H9E4 307 aa16.65■□□□□ 0.26
HOXC11-201ENST00000243082 IDNKQ5T6J7 187 aa16.65■□□□□ 0.26
HOXC11-201ENST00000243082 CNIH2Q6PI25 160 aa16.65■□□□□ 0.26
HOXC11-201ENST00000243082 ACOT12Q8WYK0 555 aa16.65■□□□□ 0.26
HOXC11-201ENST00000243082 KIAA1143Q96AT1 154 aaPredicted RBP16.65■□□□□ 0.26
HOXC11-201ENST00000243082 SDHAF3Q9NRP4 125 aa16.65■□□□□ 0.26
HOXC11-201ENST00000243082 VSX1Q9NZR4 365 aaPredicted RBP16.65■□□□□ 0.26
HOXC11-201ENST00000243082 B9D1Q9UPM9 204 aa16.65■□□□□ 0.26
HOXC11-201ENST00000243082 FKBP7Q9Y680 259 aa16.65■□□□□ 0.26
HOXC11-201ENST00000243082 TRIM3O75382 744 aaPredicted RBP16.65■□□□□ 0.26
HOXC11-201ENST00000243082 ITGA10O75578 1167 aa16.65■□□□□ 0.26
HOXC11-201ENST00000243082 DLGAP3O95886 979 aa16.65■□□□□ 0.26
HOXC11-201ENST00000243082 HLA-DOBP13765 273 aa16.65■□□□□ 0.26
HOXC11-201ENST00000243082 THBS2P35442 1172 aa16.65■□□□□ 0.26
HOXC11-201ENST00000243082 PLPPR5Q32ZL2 321 aa16.65■□□□□ 0.26
HOXC11-201ENST00000243082 PAMR1Q6UXH9 720 aa16.65■□□□□ 0.26
HOXC11-201ENST00000243082 UNQ9370/PRO34162Q6UXP9 181 aa16.65■□□□□ 0.26
HOXC11-201ENST00000243082 KCTD20Q7Z5Y7 419 aa16.65■□□□□ 0.26
HOXC11-201ENST00000243082 KDM8Q8N371 416 aa16.65■□□□□ 0.26
HOXC11-201ENST00000243082 GDPD1Q8N9F7 314 aa16.65■□□□□ 0.26
HOXC11-201ENST00000243082 DRAXINQ8NBI3 349 aaPredicted RBP16.65■□□□□ 0.26
HOXC11-201ENST00000243082 POC1BQ8TC44 478 aa16.65■□□□□ 0.26
HOXC11-201ENST00000243082 CMKLR1Q99788 373 aa16.65■□□□□ 0.26
HOXC11-201ENST00000243082 PPP1R3EQ9H7J1 279 aa16.65■□□□□ 0.26
HOXC11-201ENST00000243082 NCOR1O75376 2440 aa16.64■□□□□ 0.26
HOXC11-201ENST00000243082 TRAV1-2A0A0B4J238 106 aa16.64■□□□□ 0.25
HOXC11-201ENST00000243082 LNP1A1A4G5 178 aa16.64■□□□□ 0.25
HOXC11-201ENST00000243082 FLRT2O43155 660 aa16.64■□□□□ 0.25
HOXC11-201ENST00000243082 TMCC2O75069 709 aa16.64■□□□□ 0.25
HOXC11-201ENST00000243082 UPK3AO75631 287 aa16.64■□□□□ 0.25
HOXC11-201ENST00000243082 ABHD16AO95870 558 aa16.64■□□□□ 0.25
HOXC11-201ENST00000243082 OR8G3PP0DMU2 310 aa16.64■□□□□ 0.25
HOXC11-201ENST00000243082 PSKH1P11801 424 aa16.64■□□□□ 0.25
HOXC11-201ENST00000243082 IMPDH2P12268 514 aa16.64■□□□□ 0.25
HOXC11-201ENST00000243082 ALOX5APP20292 161 aa16.64■□□□□ 0.25
HOXC11-201ENST00000243082 RANBP1P43487 201 aa16.64■□□□□ 0.25
HOXC11-201ENST00000243082 ZNF41P51814 821 aaPredicted RBP16.64■□□□□ 0.25
HOXC11-201ENST00000243082 ZP4Q12836 540 aa16.64■□□□□ 0.25
HOXC11-201ENST00000243082 OR7A5Q15622 319 aa16.64■□□□□ 0.25
HOXC11-201ENST00000243082 EXT1Q16394 746 aa16.64■□□□□ 0.25
HOXC11-201ENST00000243082 SFXN4Q6P4A7 337 aa16.64■□□□□ 0.25
HOXC11-201ENST00000243082 DPY19L4Q7Z388 723 aa16.64■□□□□ 0.25
HOXC11-201ENST00000243082 OR6N2Q8NGY6 317 aa16.64■□□□□ 0.25
HOXC11-201ENST00000243082 DDIT4LQ96D03 193 aa16.64■□□□□ 0.25
HOXC11-201ENST00000243082 MRGPRX4Q96LA9 322 aa16.64■□□□□ 0.25
HOXC11-201ENST00000243082 KLHL15Q96M94 604 aa16.64■□□□□ 0.25
HOXC11-201ENST00000243082 INTS14Q96SY0 518 aa16.64■□□□□ 0.25
HOXC11-201ENST00000243082 CHCHD2Q9Y6H1 151 aaPredicted RBP16.64■□□□□ 0.25
HOXC11-201ENST00000243082 A0A1W2PPK0 400 aa16.63■□□□□ 0.25
HOXC11-201ENST00000243082 GPRIN2O60269 458 aa16.63■□□□□ 0.25
HOXC11-201ENST00000243082 GATBO75879 557 aaKnown RBP16.63■□□□□ 0.25
HOXC11-201ENST00000243082 CSF3P09919 207 aa16.63■□□□□ 0.25
HOXC11-201ENST00000243082 UCHL1P09936 223 aa16.63■□□□□ 0.25
HOXC11-201ENST00000243082 RPS27P42677 84 aaKnown RBP16.63■□□□□ 0.25
HOXC11-201ENST00000243082 PUDPQ08623 228 aa16.63■□□□□ 0.25
HOXC11-201ENST00000243082 MADCAM1Q13477 382 aa16.63■□□□□ 0.25
HOXC11-201ENST00000243082 MELKQ14680 651 aa16.63■□□□□ 0.25
HOXC11-201ENST00000243082 MFSD13AQ14CX5 517 aa16.63■□□□□ 0.25
HOXC11-201ENST00000243082 EGFL6Q8IUX8 553 aa16.63■□□□□ 0.25
HOXC11-201ENST00000243082 OR2M3Q8NG83 312 aa16.63■□□□□ 0.25
HOXC11-201ENST00000243082 SETD6Q8TBK2 473 aa16.63■□□□□ 0.25
HOXC11-201ENST00000243082 M1APQ8TC57 530 aa16.63■□□□□ 0.25
HOXC11-201ENST00000243082 NXPE2Q96DL1 559 aa16.63■□□□□ 0.25
HOXC11-201ENST00000243082 OR14A2Q96R54 314 aa16.63■□□□□ 0.25
HOXC11-201ENST00000243082 MNTQ99583 582 aa16.63■□□□□ 0.25
HOXC11-201ENST00000243082 TTYH2Q9BSA4 534 aa16.63■□□□□ 0.25
HOXC11-201ENST00000243082 LAMP5Q9UJQ1 280 aa16.63■□□□□ 0.25
HOXC11-201ENST00000243082 FBXL2Q9UKC9 423 aa16.63■□□□□ 0.25
HOXC11-201ENST00000243082 IGLV1-36A0A0B4J1U3 117 aa16.63■□□□□ 0.25
HOXC11-201ENST00000243082 A0A1W2PQ09 198 aa16.63■□□□□ 0.25
HOXC11-201ENST00000243082 SLC22A23A1A5C7 686 aa16.63■□□□□ 0.25
HOXC11-201ENST00000243082 SSX4O60224 188 aa16.63■□□□□ 0.25
HOXC11-201ENST00000243082 TACSTD2P09758 323 aa16.63■□□□□ 0.25
HOXC11-201ENST00000243082 APEX1P27695 318 aaKnown RBP16.63■□□□□ 0.25
HOXC11-201ENST00000243082 MAP2K6P52564 334 aa16.63■□□□□ 0.25
HOXC11-201ENST00000243082 PYDC2Q56P42 97 aa16.63■□□□□ 0.25
HOXC11-201ENST00000243082 LIPNQ5VXI9 398 aa16.63■□□□□ 0.25
HOXC11-201ENST00000243082 METAP1DQ6UB28 335 aaPredicted RBP16.63■□□□□ 0.25
HOXC11-201ENST00000243082 CCBE1Q6UXH8 406 aaPredicted RBP16.63■□□□□ 0.25
HOXC11-201ENST00000243082 H1FNTQ75WM6 255 aaPredicted RBP16.63■□□□□ 0.25
HOXC11-201ENST00000243082 SCAIQ8N9R8 606 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms