RNA–Protein interactions for RNA: ENST00000242776.8

DDX39A-201, Transcript of DExD-box helicase 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39A, Length 1,471 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-201ENST00000242776 ZNF836Q6ZNA1 936 aa12□□□□□ -0.49
DDX39A-201ENST00000242776 TUBA1AQ71U36 451 aa12□□□□□ -0.49
DDX39A-201ENST00000242776 AQP12AQ8IXF9 295 aa12□□□□□ -0.49
DDX39A-201ENST00000242776 C3orf56Q8N813 242 aa12□□□□□ -0.49
DDX39A-201ENST00000242776 SMYD1Q8NB12 490 aa12□□□□□ -0.49
DDX39A-201ENST00000242776 PIGXQ8TBF5 258 aa12□□□□□ -0.49
DDX39A-201ENST00000242776 LAT2Q9GZY6 243 aa12□□□□□ -0.49
DDX39A-201ENST00000242776 DCAF13Q9NV06 445 aaKnown RBP12□□□□□ -0.49
DDX39A-201ENST00000242776 KCNE5Q9UJ90 142 aa12□□□□□ -0.49
DDX39A-201ENST00000242776 METRNQ9UJH8 293 aa12□□□□□ -0.49
DDX39A-201ENST00000242776 LYNX1G3V0Z9 82 aa11.99□□□□□ -0.49
DDX39A-201ENST00000242776 GPR171O14626 319 aa11.99□□□□□ -0.49
DDX39A-201ENST00000242776 BCAS1O75363 584 aaPredicted RBP11.99□□□□□ -0.49
DDX39A-201ENST00000242776 OR4A8P0C604 315 aa11.99□□□□□ -0.49
DDX39A-201ENST00000242776 LYNX1P0DP58 116 aa11.99□□□□□ -0.49
DDX39A-201ENST00000242776 DAOP14920 347 aa11.99□□□□□ -0.49
DDX39A-201ENST00000242776 HOXB6P17509 224 aaKnown RBP11.99□□□□□ -0.49
DDX39A-201ENST00000242776 FKBP9P1Q75LS8 142 aa11.99□□□□□ -0.49
DDX39A-201ENST00000242776 SPATA24Q86W54 205 aa11.99□□□□□ -0.49
DDX39A-201ENST00000242776 ZNF440Q8IYI8 595 aa11.99□□□□□ -0.49
DDX39A-201ENST00000242776 LINC01356Q8N9X3 169 aa11.99□□□□□ -0.49
DDX39A-201ENST00000242776 TMEM234Q8WY98 164 aa11.99□□□□□ -0.49
DDX39A-201ENST00000242776 ST8SIA1Q92185 356 aa11.99□□□□□ -0.49
DDX39A-201ENST00000242776 ZG16BQ96DA0 208 aa11.99□□□□□ -0.49
DDX39A-201ENST00000242776 RSRC1Q96IZ7 334 aaKnown RBP11.99□□□□□ -0.49
DDX39A-201ENST00000242776 TPD52L3Q96J77 140 aa11.99□□□□□ -0.49
DDX39A-201ENST00000242776 LPAR2Q9HBW0 351 aa11.99□□□□□ -0.49
DDX39A-201ENST00000242776 CA10Q9NS85 328 aa11.99□□□□□ -0.49
DDX39A-201ENST00000242776 ACER3Q9NUN7 267 aa11.99□□□□□ -0.49
DDX39A-201ENST00000242776 SLC9A8Q9Y2E8 581 aa11.99□□□□□ -0.49
DDX39A-201ENST00000242776 IGHV1-18A0A0C4DH31 117 aa11.98□□□□□ -0.49
DDX39A-201ENST00000242776 PGCP20142 388 aa11.98□□□□□ -0.49
DDX39A-201ENST00000242776 CD247P20963 164 aa11.98□□□□□ -0.49
DDX39A-201ENST00000242776 CHN2P52757 468 aa11.98□□□□□ -0.49
DDX39A-201ENST00000242776 PDK3Q15120 406 aa11.98□□□□□ -0.49
DDX39A-201ENST00000242776 IFI44LQ53G44 452 aa11.98□□□□□ -0.49
DDX39A-201ENST00000242776 C10orf67Q8IYJ2 551 aa11.98□□□□□ -0.49
DDX39A-201ENST00000242776 ZNF540Q8NDQ6 660 aa11.98□□□□□ -0.49
DDX39A-201ENST00000242776 GEMIN6Q8WXD5 167 aaKnown RBP11.98□□□□□ -0.49
DDX39A-201ENST00000242776 SLC35B4Q969S0 331 aa11.98□□□□□ -0.49
DDX39A-201ENST00000242776 HSH2DQ96JZ2 352 aa11.98□□□□□ -0.49
DDX39A-201ENST00000242776 NARFLQ9H6Q4 476 aa11.98□□□□□ -0.49
DDX39A-201ENST00000242776 MYOZ1Q9NP98 299 aaPredicted RBP11.98□□□□□ -0.49
DDX39A-201ENST00000242776 EXOSC3Q9NQT5 275 aaKnown RBP11.98□□□□□ -0.49
DDX39A-201ENST00000242776 CHRNA9Q9UGM1 479 aa11.98□□□□□ -0.49
DDX39A-201ENST00000242776 CDHR4A6H8M9 788 aa11.97□□□□□ -0.49
DDX39A-201ENST00000242776 PDLIM1O00151 329 aa11.97□□□□□ -0.49
DDX39A-201ENST00000242776 ETV2O00321 342 aaPredicted RBP11.97□□□□□ -0.49
DDX39A-201ENST00000242776 PMS2P2O95744 297 aa11.97□□□□□ -0.49
DDX39A-201ENST00000242776 LGI1O95970 557 aa11.97□□□□□ -0.49
DDX39A-201ENST00000242776 WNT11O96014 354 aa11.97□□□□□ -0.49
DDX39A-201ENST00000242776 GPIP06744 558 aa11.97□□□□□ -0.49
DDX39A-201ENST00000242776 UMPSP11172 480 aa11.97□□□□□ -0.49
DDX39A-201ENST00000242776 UQCRBP14927 111 aa11.97□□□□□ -0.49
DDX39A-201ENST00000242776 CRYBA2P53672 197 aa11.97□□□□□ -0.49
DDX39A-201ENST00000242776 RGS8P57771 180 aaPredicted RBP11.97□□□□□ -0.49
DDX39A-201ENST00000242776 LGALS3BPQ08380 585 aa11.97□□□□□ -0.49
DDX39A-201ENST00000242776 ADIPOQQ15848 244 aa11.97□□□□□ -0.49
DDX39A-201ENST00000242776 DUSP7Q16829 419 aa11.97□□□□□ -0.49
DDX39A-201ENST00000242776 FAM98BQ52LJ0 330 aaKnown RBP11.97□□□□□ -0.49
DDX39A-201ENST00000242776 RANBP3LQ86VV4 465 aaPredicted RBP11.97□□□□□ -0.49
DDX39A-201ENST00000242776 C17orf78Q8N4C9 275 aa11.97□□□□□ -0.49
DDX39A-201ENST00000242776 SLC25A43Q8WUT9 341 aaPredicted RBP11.97□□□□□ -0.49
DDX39A-201ENST00000242776 GCDHQ92947 438 aaPredicted RBP11.97□□□□□ -0.49
DDX39A-201ENST00000242776 SLC47A1Q96FL8 570 aa11.97□□□□□ -0.49
DDX39A-201ENST00000242776 PYURFQ96I23 114 aa11.97□□□□□ -0.49
DDX39A-201ENST00000242776 RAB1BQ9H0U4 201 aa11.97□□□□□ -0.49
DDX39A-201ENST00000242776 SEC61A2Q9H9S3 476 aa11.97□□□□□ -0.49
DDX39A-201ENST00000242776 FLVCR1Q9Y5Y0 555 aa11.97□□□□□ -0.49
DDX39A-201ENST00000242776 SPIN1Q9Y657 262 aaPredicted RBP11.97□□□□□ -0.49
DDX39A-201ENST00000242776 V9GYQ6 96 aa11.97□□□□□ -0.49
DDX39A-201ENST00000242776 MEGF8Q7Z7M0 2845 aa11.97□□□□□ -0.49
DDX39A-201ENST00000242776 TCRBV5S2A0A599 114 aa11.96□□□□□ -0.49
DDX39A-201ENST00000242776 CLDN24A6NM45 220 aa11.96□□□□□ -0.49
DDX39A-201ENST00000242776 B9A039 149 aa11.96□□□□□ -0.49
DDX39A-201ENST00000242776 ANKRD65E5RJM6 399 aa11.96□□□□□ -0.49
DDX39A-201ENST00000242776 TPST1O60507 370 aa11.96□□□□□ -0.49
DDX39A-201ENST00000242776 LILRA1O75019 489 aa11.96□□□□□ -0.49
DDX39A-201ENST00000242776 KRT33AO76009 404 aa11.96□□□□□ -0.49
DDX39A-201ENST00000242776 IFNGR1P15260 489 aa11.96□□□□□ -0.49
DDX39A-201ENST00000242776 TGFBR3Q03167 851 aa11.96□□□□□ -0.49
DDX39A-201ENST00000242776 VTCN1Q7Z7D3 282 aa11.96□□□□□ -0.49
DDX39A-201ENST00000242776 SVOPLQ8N434 492 aa11.96□□□□□ -0.49
DDX39A-201ENST00000242776 FAM71CQ8NEG0 241 aa11.96□□□□□ -0.49
DDX39A-201ENST00000242776 SEMA6DQ8NFY4 1073 aa11.96□□□□□ -0.49
DDX39A-201ENST00000242776 GPR32P1Q8NGA4 272 aa11.96□□□□□ -0.49
DDX39A-201ENST00000242776 SLC38A2Q96QD8 506 aa11.96□□□□□ -0.49
DDX39A-201ENST00000242776 TPK1Q9H3S4 243 aa11.96□□□□□ -0.49
DDX39A-201ENST00000242776 MAGIXQ9H6Y5 334 aa11.96□□□□□ -0.49
DDX39A-201ENST00000242776 TESQ9UGI8 421 aaKnown RBP11.96□□□□□ -0.49
DDX39A-201ENST00000242776 PRDM4Q9UKN5 801 aa11.96□□□□□ -0.49
DDX39A-201ENST00000242776 SH3GLB1Q9Y371 365 aa11.96□□□□□ -0.49
DDX39A-201ENST00000242776 TCRBV3S1A0A5B6 114 aa11.95□□□□□ -0.5
DDX39A-201ENST00000242776 DHRS12A0PJE2 317 aa11.95□□□□□ -0.5
DDX39A-201ENST00000242776 hCG_2039718K7EN88 272 aa11.95□□□□□ -0.5
DDX39A-201ENST00000242776 AP3D1O14617 1153 aa11.95□□□□□ -0.5
DDX39A-201ENST00000242776 CRYAAP02489 173 aa11.95□□□□□ -0.5
DDX39A-201ENST00000242776 IFNW1P05000 195 aa11.95□□□□□ -0.5
DDX39A-201ENST00000242776 MPGP29372 298 aa11.95□□□□□ -0.5
DDX39A-201ENST00000242776 CALCRP30988 508 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms