RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 ZNF704Q6ZNC4 412 aaPredicted RBP11.11□□□□□ -0.63
LSM5-201ENST00000223084 MBOAT2Q6ZWT7 520 aa11.11□□□□□ -0.63
LSM5-201ENST00000223084 TUBA1AQ71U36 451 aa11.11□□□□□ -0.63
LSM5-201ENST00000223084 DHFR2Q86XF0 187 aa11.11□□□□□ -0.63
LSM5-201ENST00000223084 ARHGAP24Q8N264 748 aa11.11□□□□□ -0.63
LSM5-201ENST00000223084 C1orf162Q8NEQ5 155 aaPredicted RBP11.11□□□□□ -0.63
LSM5-201ENST00000223084 OR13C2Q8NGS9 318 aa11.11□□□□□ -0.63
LSM5-201ENST00000223084 OR6N1Q8NGY5 312 aa11.11□□□□□ -0.63
LSM5-201ENST00000223084 OR51A7Q8NH64 312 aa11.11□□□□□ -0.63
LSM5-201ENST00000223084 SLC7A13Q8TCU3 470 aa11.11□□□□□ -0.63
LSM5-201ENST00000223084 BCL2L2Q92843 193 aaPredicted RBP11.11□□□□□ -0.63
LSM5-201ENST00000223084 NEUROG1Q92886 237 aa11.11□□□□□ -0.63
LSM5-201ENST00000223084 CCDC124Q96CT7 223 aaKnown RBP11.11□□□□□ -0.63
LSM5-201ENST00000223084 SLC7A6OSQ96CW6 309 aaPredicted RBP11.11□□□□□ -0.63
LSM5-201ENST00000223084 SEPHS2Q99611 448 aa11.11□□□□□ -0.63
LSM5-201ENST00000223084 PIP5K1AQ99755 562 aa11.11□□□□□ -0.63
LSM5-201ENST00000223084 TMEM204Q9BSN7 226 aa11.11□□□□□ -0.63
LSM5-201ENST00000223084 C1orf21Q9H246 121 aa11.11□□□□□ -0.63
LSM5-201ENST00000223084 NELFAQ9H3P2 528 aa11.11□□□□□ -0.63
LSM5-201ENST00000223084 CRLF2Q9HC73 371 aa11.11□□□□□ -0.63
LSM5-201ENST00000223084 NGBQ9NPG2 151 aa11.11□□□□□ -0.63
LSM5-201ENST00000223084 INIPQ9NRY2 104 aa11.11□□□□□ -0.63
LSM5-201ENST00000223084 A0A1W2PRQ8 180 aa11.1□□□□□ -0.63
LSM5-201ENST00000223084 EFCAB9A8MZ26 197 aa11.1□□□□□ -0.63
LSM5-201ENST00000223084 RPL36A-HNRNPH2H7BZ11 118 aa11.1□□□□□ -0.63
LSM5-201ENST00000223084 M0R1B8 84 aa11.1□□□□□ -0.63
LSM5-201ENST00000223084 CDC42EP2O14613 210 aa11.1□□□□□ -0.63
LSM5-201ENST00000223084 BCL10O95999 233 aa11.1□□□□□ -0.63
LSM5-201ENST00000223084 FABP3P05413 133 aa11.1□□□□□ -0.63
LSM5-201ENST00000223084 CD3EP07766 207 aa11.1□□□□□ -0.63
LSM5-201ENST00000223084 TSPAN19P0C672 248 aa11.1□□□□□ -0.63
LSM5-201ENST00000223084 SAGP10523 405 aaPredicted RBP11.1□□□□□ -0.63
LSM5-201ENST00000223084 ITGA2P17301 1181 aa11.1□□□□□ -0.63
LSM5-201ENST00000223084 SPIBQ01892 262 aa11.1□□□□□ -0.63
LSM5-201ENST00000223084 RUNX1T1Q06455 604 aa11.1□□□□□ -0.63
LSM5-201ENST00000223084 FHL1Q13642 323 aa11.1□□□□□ -0.63
LSM5-201ENST00000223084 DGCR6Q14129 220 aa11.1□□□□□ -0.63
LSM5-201ENST00000223084 SEC23BQ15437 767 aa11.1□□□□□ -0.63
LSM5-201ENST00000223084 RRM2BQ7LG56 351 aa11.1□□□□□ -0.63
LSM5-201ENST00000223084 IGFN1Q86VF2 1251 aa11.1□□□□□ -0.63
LSM5-201ENST00000223084 ZDHHC21Q8IVQ6 265 aa11.1□□□□□ -0.63
LSM5-201ENST00000223084 RNF113BQ8IZP6 322 aaKnown RBP11.1□□□□□ -0.63
LSM5-201ENST00000223084 C17orf78Q8N4C9 275 aa11.1□□□□□ -0.63
LSM5-201ENST00000223084 OR6X1Q8NH79 312 aa11.1□□□□□ -0.63
LSM5-201ENST00000223084 LILRB1Q8NHL6 650 aaPredicted RBP11.1□□□□□ -0.63
LSM5-201ENST00000223084 MCUR1Q96AQ8 359 aa11.1□□□□□ -0.63
LSM5-201ENST00000223084 LRR1Q96L50 414 aa11.1□□□□□ -0.63
LSM5-201ENST00000223084 DHRS1Q96LJ7 313 aa11.1□□□□□ -0.63
LSM5-201ENST00000223084 TNFRSF13CQ96RJ3 184 aa11.1□□□□□ -0.63
LSM5-201ENST00000223084 ANKRD19PQ9H560 264 aa11.1□□□□□ -0.63
LSM5-201ENST00000223084 ESRP2Q9H6T0 727 aaKnown RBP11.1□□□□□ -0.63
LSM5-201ENST00000223084 AMDHD2Q9Y303 409 aa11.1□□□□□ -0.63
LSM5-201ENST00000223084 RAI1Q7Z5J4 1906 aaPredicted RBP11.09□□□□□ -0.63
LSM5-201ENST00000223084 PLCE1Q9P212 2302 aa11.09□□□□□ -0.63
LSM5-201ENST00000223084 ARID1AO14497 2285 aa11.09□□□□□ -0.63
LSM5-201ENST00000223084 A0A1W2PRG6 482 aa11.09□□□□□ -0.63
LSM5-201ENST00000223084 GYG2O15488 501 aa11.09□□□□□ -0.63
LSM5-201ENST00000223084 ATE1O95260 518 aa11.09□□□□□ -0.63
LSM5-201ENST00000223084 RAF1P04049 648 aa11.09□□□□□ -0.63
LSM5-201ENST00000223084 DNASE1P24855 282 aa11.09□□□□□ -0.63
LSM5-201ENST00000223084 HOXC12P31275 282 aa11.09□□□□□ -0.63
LSM5-201ENST00000223084 CSNK1A1P48729 337 aa11.09□□□□□ -0.63
LSM5-201ENST00000223084 PRPS1P60891 318 aa11.09□□□□□ -0.63
LSM5-201ENST00000223084 SPOCK1Q08629 439 aa11.09□□□□□ -0.63
LSM5-201ENST00000223084 TOP3AQ13472 1001 aaPredicted RBP11.09□□□□□ -0.63
LSM5-201ENST00000223084 KEAP1Q14145 624 aa11.09□□□□□ -0.63
LSM5-201ENST00000223084 ACKR1Q16570 336 aa11.09□□□□□ -0.63
LSM5-201ENST00000223084 LCN8Q6JVE9 175 aa11.09□□□□□ -0.63
LSM5-201ENST00000223084 ADAM5Q6NVV9 412 aa11.09□□□□□ -0.63
LSM5-201ENST00000223084 ANKRD16Q6P6B7 361 aa11.09□□□□□ -0.63
LSM5-201ENST00000223084 KLHL24Q6TFL4 600 aa11.09□□□□□ -0.63
LSM5-201ENST00000223084 CDK20Q8IZL9 346 aa11.09□□□□□ -0.63
LSM5-201ENST00000223084 LRRC75AQ8NAA5 344 aa11.09□□□□□ -0.63
LSM5-201ENST00000223084 KBTBD8Q8NFY9 601 aa11.09□□□□□ -0.63
LSM5-201ENST00000223084 OR4K5Q8NGD3 323 aa11.09□□□□□ -0.63
LSM5-201ENST00000223084 ASB10Q8WXI3 467 aa11.09□□□□□ -0.63
LSM5-201ENST00000223084 AKAP1Q92667 903 aaKnown RBP eCLIP11.09□□□□□ -0.63
LSM5-201ENST00000223084 TMEM54Q969K7 222 aa11.09□□□□□ -0.63
LSM5-201ENST00000223084 ZNF566Q969W8 418 aa11.09□□□□□ -0.63
LSM5-201ENST00000223084 FAM46AQ96IP4 442 aaKnown RBP11.09□□□□□ -0.63
LSM5-201ENST00000223084 ADAD1Q96M93 576 aaKnown RBP11.09□□□□□ -0.63
LSM5-201ENST00000223084 FUZQ9BT04 418 aa11.09□□□□□ -0.63
LSM5-201ENST00000223084 ULBP2Q9BZM5 246 aa11.09□□□□□ -0.63
LSM5-201ENST00000223084 MUC13Q9H3R2 512 aa11.09□□□□□ -0.63
LSM5-201ENST00000223084 IL1RAPQ9NPH3 570 aa11.09□□□□□ -0.63
LSM5-201ENST00000223084 B3GAT2Q9NPZ5 323 aa11.09□□□□□ -0.63
LSM5-201ENST00000223084 GLTPQ9NZD2 209 aa11.09□□□□□ -0.63
LSM5-201ENST00000223084 HIF3AQ9Y2N7 669 aa11.09□□□□□ -0.63
LSM5-201ENST00000223084 RNF115Q9Y4L5 304 aa11.09□□□□□ -0.63
LSM5-201ENST00000223084 USF3Q68DE3 2245 aa11.09□□□□□ -0.63
LSM5-201ENST00000223084 AKAP9Q99996 3911 aa11.09□□□□□ -0.63
LSM5-201ENST00000223084 HTR3EA5X5Y0 456 aa11.08□□□□□ -0.64
LSM5-201ENST00000223084 ZNF503-AS2A6NEH8 195 aa11.08□□□□□ -0.64
LSM5-201ENST00000223084 MCIDASD6RGH6 385 aa11.08□□□□□ -0.64
LSM5-201ENST00000223084 ABCD4O14678 606 aa11.08□□□□□ -0.64
LSM5-201ENST00000223084 ACOT8O14734 319 aa11.08□□□□□ -0.64
LSM5-201ENST00000223084 GADD45GO95257 159 aa11.08□□□□□ -0.64
LSM5-201ENST00000223084 WNT11O96014 354 aa11.08□□□□□ -0.64
LSM5-201ENST00000223084 PGA4P0DJD7 388 aa11.08□□□□□ -0.64
LSM5-201ENST00000223084 PGA3P0DJD8 388 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms