RNA–Protein interactions for RNA: ENSMUST00000187758.6

Usp40-204, Transcript of Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Usp40, Length 3,977 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40-204ENSMUST00000187758 Ggta1l1A2AUQ7 319 aa6.82□□□□□ -1.32
Usp40-204ENSMUST00000187758 Gm8237E9Q257 205 aa6.82□□□□□ -1.32
Usp40-204ENSMUST00000187758 Pgbd1E9Q492 415 aa6.82□□□□□ -1.32
Usp40-204ENSMUST00000187758 Vmn1r167G3UW71 315 aa6.82□□□□□ -1.32
Usp40-204ENSMUST00000187758 Socs1O35716 212 aa6.82□□□□□ -1.32
Usp40-204ENSMUST00000187758 Atp6v1e1P50518 226 aa6.82□□□□□ -1.32
Usp40-204ENSMUST00000187758 Hrh3P58406 445 aa6.82□□□□□ -1.32
Usp40-204ENSMUST00000187758 DtymkP97930 212 aa6.82□□□□□ -1.32
Usp40-204ENSMUST00000187758 VegfdP97946 358 aa6.82□□□□□ -1.32
Usp40-204ENSMUST00000187758 Ipcef1Q5DU31 406 aa6.82□□□□□ -1.32
Usp40-204ENSMUST00000187758 Snta1Q61234 503 aa6.82□□□□□ -1.32
Usp40-204ENSMUST00000187758 Slc22a13Q6A4L0 551 aa6.82□□□□□ -1.32
Usp40-204ENSMUST00000187758 Alg8Q6P8H8 526 aa6.82□□□□□ -1.32
Usp40-204ENSMUST00000187758 Zfp954Q7TNU5 416 aa6.82□□□□□ -1.32
Usp40-204ENSMUST00000187758 Mettl6Q8BVH9 282 aa6.82□□□□□ -1.32
Usp40-204ENSMUST00000187758 Vmn1r208Q8R275 308 aa6.82□□□□□ -1.32
Usp40-204ENSMUST00000187758 TbccQ8VCN9 341 aa6.82□□□□□ -1.32
Usp40-204ENSMUST00000187758 Olfr658Q8VGV5 323 aa6.82□□□□□ -1.32
Usp40-204ENSMUST00000187758 Dusp3Q9D7X3 185 aa6.82□□□□□ -1.32
Usp40-204ENSMUST00000187758 Mrps34Q9JIK9 218 aa6.82□□□□□ -1.32
Usp40-204ENSMUST00000187758 Hipk2Q9QZR5 1196 aa6.82□□□□□ -1.32
Usp40-204ENSMUST00000187758 Slc22a21Q9WTN6 564 aa6.82□□□□□ -1.32
Usp40-204ENSMUST00000187758 Wif1Q9WUA1 379 aa6.82□□□□□ -1.32
Usp40-204ENSMUST00000187758 Ramp2Q9WUP0 189 aa6.82□□□□□ -1.32
Usp40-204ENSMUST00000187758 Kcnk7Q9Z2T1 307 aa6.82□□□□□ -1.32
Usp40-204ENSMUST00000187758 Cabin1G3X8Q1 2187 aaKnown RBP6.82□□□□□ -1.32
Usp40-204ENSMUST00000187758 BC024063A0A1W2P7G7 749 aa6.82□□□□□ -1.32
Usp40-204ENSMUST00000187758 Smim17A0A504 109 aa6.82□□□□□ -1.32
Usp40-204ENSMUST00000187758 Ccnb1ip1D3Z3K2 276 aa6.82□□□□□ -1.32
Usp40-204ENSMUST00000187758 A630023A22RikJ3QP60 199 aa6.82□□□□□ -1.32
Usp40-204ENSMUST00000187758 Gm17019K7N6W5 255 aa6.82□□□□□ -1.32
Usp40-204ENSMUST00000187758 Hmgn2P09602 90 aa6.82□□□□□ -1.32
Usp40-204ENSMUST00000187758 Drd3P30728 446 aa6.82□□□□□ -1.32
Usp40-204ENSMUST00000187758 Rpl6P47911 296 aaKnown RBP6.82□□□□□ -1.32
Usp40-204ENSMUST00000187758 Nkx3-2P97503 333 aa6.82□□□□□ -1.32
Usp40-204ENSMUST00000187758 Gm45902Q3UDN3 361 aa6.82□□□□□ -1.32
Usp40-204ENSMUST00000187758 Il15raQ60819 263 aa6.82□□□□□ -1.32
Usp40-204ENSMUST00000187758 Elavl2Q60899 360 aaKnown RBP6.82□□□□□ -1.32
Usp40-204ENSMUST00000187758 Wbp4Q61048 376 aa6.82□□□□□ -1.32
Usp40-204ENSMUST00000187758 Foxd3Q61060 465 aa6.82□□□□□ -1.32
Usp40-204ENSMUST00000187758 Slc35a1Q61420 336 aa6.82□□□□□ -1.32
Usp40-204ENSMUST00000187758 Zc4h2Q68FG0 224 aa6.82□□□□□ -1.32
Usp40-204ENSMUST00000187758 Eid2Q6X7S9 236 aa6.82□□□□□ -1.32
Usp40-204ENSMUST00000187758 AI987944Q7TPX5 406 aa6.82□□□□□ -1.32
Usp40-204ENSMUST00000187758 Baiap2Q8BKX1 535 aa6.82□□□□□ -1.32
Usp40-204ENSMUST00000187758 Olfr170Q8VGL6 313 aa6.82□□□□□ -1.32
Usp40-204ENSMUST00000187758 Sfxn2Q925N2 322 aa6.82□□□□□ -1.32
Usp40-204ENSMUST00000187758 Atp5f1Q9CQQ7 256 aaKnown RBP6.82□□□□□ -1.32
Usp40-204ENSMUST00000187758 Ppil3Q9D6L8 161 aa6.82□□□□□ -1.32
Usp40-204ENSMUST00000187758 Aqp9Q9JJJ3 295 aa6.82□□□□□ -1.32
Usp40-204ENSMUST00000187758 Htra1Q9R118 480 aa6.82□□□□□ -1.32
Usp40-204ENSMUST00000187758 Padi1Q9Z185 662 aa6.82□□□□□ -1.32
Usp40-204ENSMUST00000187758 2610021A01RikE9Q0Q3 834 aa6.81□□□□□ -1.32
Usp40-204ENSMUST00000187758 Prdm14E9Q3T6 561 aa6.81□□□□□ -1.32
Usp40-204ENSMUST00000187758 P18524 117 aa6.81□□□□□ -1.32
Usp40-204ENSMUST00000187758 DctP29812 517 aa6.81□□□□□ -1.32
Usp40-204ENSMUST00000187758 Zdhhc2P59267 366 aa6.81□□□□□ -1.32
Usp40-204ENSMUST00000187758 Rps7P62082 194 aaKnown RBP6.81□□□□□ -1.32
Usp40-204ENSMUST00000187758 CtseP70269 397 aa6.81□□□□□ -1.32
Usp40-204ENSMUST00000187758 Rps3aP97351 264 aaKnown RBP6.81□□□□□ -1.32
Usp40-204ENSMUST00000187758 BC030870Q3V2G4 71 aa6.81□□□□□ -1.32
Usp40-204ENSMUST00000187758 Irgm1Q60766 409 aa6.81□□□□□ -1.32
Usp40-204ENSMUST00000187758 Nox3Q672J9 568 aa6.81□□□□□ -1.32
Usp40-204ENSMUST00000187758 Znf511Q6P0X2 227 aa6.81□□□□□ -1.32
Usp40-204ENSMUST00000187758 Dppa4Q8CCG4 296 aa6.81□□□□□ -1.32
Usp40-204ENSMUST00000187758 Nmral1Q8K2T1 309 aa6.81□□□□□ -1.32
Usp40-204ENSMUST00000187758 Vmn1r201Q8R262 300 aa6.81□□□□□ -1.32
Usp40-204ENSMUST00000187758 Ccdc59Q8R2N0 240 aaKnown RBP6.81□□□□□ -1.32
Usp40-204ENSMUST00000187758 BanpQ8VBU8 548 aa6.81□□□□□ -1.32
Usp40-204ENSMUST00000187758 Slc27a4Q91VE0 643 aaKnown RBP6.81□□□□□ -1.32
Usp40-204ENSMUST00000187758 Spryd4Q91WK1 207 aa6.81□□□□□ -1.32
Usp40-204ENSMUST00000187758 NepnQ9CQ76 512 aa6.81□□□□□ -1.32
Usp40-204ENSMUST00000187758 Ift27Q9D0P8 186 aa6.81□□□□□ -1.32
Usp40-204ENSMUST00000187758 Fundc2Q9D6K8 151 aa6.81□□□□□ -1.32
Usp40-204ENSMUST00000187758 Dll4Q9JI71 686 aa6.81□□□□□ -1.32
Usp40-204ENSMUST00000187758 Serpini2Q9JK88 405 aa6.81□□□□□ -1.32
Usp40-204ENSMUST00000187758 Npas3Q9QZQ0 925 aa6.81□□□□□ -1.32
Usp40-204ENSMUST00000187758 Gm17190V9GX38 357 aa6.81□□□□□ -1.32
Usp40-204ENSMUST00000187758 Gm13124A2A752 406 aa6.81□□□□□ -1.32
Usp40-204ENSMUST00000187758 Mn1D3YWE6 1297 aa6.81□□□□□ -1.32
Usp40-204ENSMUST00000187758 Olfr521E9Q519 321 aa6.81□□□□□ -1.32
Usp40-204ENSMUST00000187758 Gm42421F6X8D5 166 aa6.81□□□□□ -1.32
Usp40-204ENSMUST00000187758 Obox6G3X9U1 347 aa6.81□□□□□ -1.32
Usp40-204ENSMUST00000187758 H2-ObO35424 271 aa6.81□□□□□ -1.32
Usp40-204ENSMUST00000187758 Csf2P01587 141 aa6.81□□□□□ -1.32
Usp40-204ENSMUST00000187758 Tuba3aP05214 450 aaKnown RBP6.81□□□□□ -1.32
Usp40-204ENSMUST00000187758 Rpl7P14148 270 aaKnown RBP6.81□□□□□ -1.32
Usp40-204ENSMUST00000187758 Sox18P43680 377 aa6.81□□□□□ -1.32
Usp40-204ENSMUST00000187758 Limk1P53668 647 aa6.81□□□□□ -1.32
Usp40-204ENSMUST00000187758 Rps5P97461 204 aaKnown RBP6.81□□□□□ -1.32
Usp40-204ENSMUST00000187758 Gch1Q05915 241 aa6.81□□□□□ -1.32
Usp40-204ENSMUST00000187758 Mier2Q3U3N0 541 aa6.81□□□□□ -1.32
Usp40-204ENSMUST00000187758 CrxosQ3UL53 246 aa6.81□□□□□ -1.32
Usp40-204ENSMUST00000187758 Ctsll3Q3ULP7 331 aa6.81□□□□□ -1.32
Usp40-204ENSMUST00000187758 Tssk1bQ61241 365 aa6.81□□□□□ -1.32
Usp40-204ENSMUST00000187758 Adam26bQ6IMH6 699 aa6.81□□□□□ -1.32
Usp40-204ENSMUST00000187758 Olfr967Q7TRA6 310 aa6.81□□□□□ -1.32
Usp40-204ENSMUST00000187758 ChdhQ8BJ64 596 aa6.81□□□□□ -1.32
Usp40-204ENSMUST00000187758 LdahQ8BVA5 326 aa6.81□□□□□ -1.32
Usp40-204ENSMUST00000187758 Cnot2Q8C5L3 540 aaKnown RBP6.81□□□□□ -1.32
Retrieved 100 of 22,080 RNA–protein pairs in 34.8 ms