RNA–Protein interactions for RNA: ENSMUST00000053317.11

Bdnf-201, Transcript of Brain-derived neurotrophic factor, mousemouse

TSL 1 (best) BASIC

Gene Bdnf, Length 4,266 nt, Biotype protein coding, Subcellular localisation Dendrite .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-201ENSMUST00000053317 Slc37a2Q9WU81 501 aa6.31□□□□□ -1.4
Bdnf-201ENSMUST00000053317 CtszQ9WUU7 306 aa6.31□□□□□ -1.4
Bdnf-201ENSMUST00000053317 Dnajc13D4AFX7 2248 aaKnown RBP6.31□□□□□ -1.4
Bdnf-201ENSMUST00000053317 Pramef6A2A8M8 474 aa6.31□□□□□ -1.4
Bdnf-201ENSMUST00000053317 Tmem229aB9EJI9 371 aa6.31□□□□□ -1.4
Bdnf-201ENSMUST00000053317 Gm17333C6EQI3 125 aa6.31□□□□□ -1.4
Bdnf-201ENSMUST00000053317 Gm3327F7C9A1 213 aa6.31□□□□□ -1.4
Bdnf-201ENSMUST00000053317 Vmn1r14H3BJ46 303 aa6.31□□□□□ -1.4
Bdnf-201ENSMUST00000053317 Aqp2P56402 271 aa6.31□□□□□ -1.4
Bdnf-201ENSMUST00000053317 NrgnP60761 78 aa6.31□□□□□ -1.4
Bdnf-201ENSMUST00000053317 Gpr143P70259 405 aa6.31□□□□□ -1.4
Bdnf-201ENSMUST00000053317 Zfp41Q02526 198 aa6.31□□□□□ -1.4
Bdnf-201ENSMUST00000053317 Olfr616Q3KPB0 317 aa6.31□□□□□ -1.4
Bdnf-201ENSMUST00000053317 Ccbe1Q3MI99 408 aa6.31□□□□□ -1.4
Bdnf-201ENSMUST00000053317 Cnep1r1Q3UJ81 125 aa6.31□□□□□ -1.4
Bdnf-201ENSMUST00000053317 Gm10750Q3V0I0 133 aa6.31□□□□□ -1.4
Bdnf-201ENSMUST00000053317 Usp22Q5DU02 525 aa6.31□□□□□ -1.4
Bdnf-201ENSMUST00000053317 Olfr146Q60884 306 aa6.31□□□□□ -1.4
Bdnf-201ENSMUST00000053317 Frg2f1Q6P3A2 227 aa6.31□□□□□ -1.4
Bdnf-201ENSMUST00000053317 Zfp189Q8BKP2 608 aa6.31□□□□□ -1.4
Bdnf-201ENSMUST00000053317 ArsjQ8BM89 598 aa6.31□□□□□ -1.4
Bdnf-201ENSMUST00000053317 Slc15a3Q8BPX9 578 aa6.31□□□□□ -1.4
Bdnf-201ENSMUST00000053317 Clec9aQ8BRU4 238 aa6.31□□□□□ -1.4
Bdnf-201ENSMUST00000053317 Tmem252Q8C353 183 aa6.31□□□□□ -1.4
Bdnf-201ENSMUST00000053317 Sertm1Q8CD78 107 aa6.31□□□□□ -1.4
Bdnf-201ENSMUST00000053317 Slc38a4Q8R1S9 547 aa6.31□□□□□ -1.4
Bdnf-201ENSMUST00000053317 Wdr45Q91VM3 360 aa6.31□□□□□ -1.4
Bdnf-201ENSMUST00000053317 Mrgpra8Q91ZC4 305 aa6.31□□□□□ -1.4
Bdnf-201ENSMUST00000053317 Gmpr2Q99L27 348 aa6.31□□□□□ -1.4
Bdnf-201ENSMUST00000053317 Slc29a3Q99P65 475 aa6.31□□□□□ -1.4
Bdnf-201ENSMUST00000053317 Krt88Q9CPR6 171 aa6.31□□□□□ -1.4
Bdnf-201ENSMUST00000053317 Rbm7Q9CQT2 265 aaKnown RBP6.31□□□□□ -1.4
Bdnf-201ENSMUST00000053317 Slc46a3Q9DC26 460 aa6.31□□□□□ -1.4
Bdnf-201ENSMUST00000053317 Mettl15Q9DCL4 406 aa6.31□□□□□ -1.4
Bdnf-201ENSMUST00000053317 Xylt2Q9EPL0 865 aa6.31□□□□□ -1.4
Bdnf-201ENSMUST00000053317 9530002B09RikQ9EPV7 135 aa6.31□□□□□ -1.4
Bdnf-201ENSMUST00000053317 Fezf2Q9ESP5 455 aa6.31□□□□□ -1.4
Bdnf-201ENSMUST00000053317 AireQ9Z0E3 552 aa6.31□□□□□ -1.4
Bdnf-201ENSMUST00000053317 Gm2022A0A1Y7VLT7 144 aa6.31□□□□□ -1.4
Bdnf-201ENSMUST00000053317 Slc25a25A2ASZ8 469 aa6.31□□□□□ -1.4
Bdnf-201ENSMUST00000053317 Gm14085A2AWR5 660 aa6.31□□□□□ -1.4
Bdnf-201ENSMUST00000053317 Cypt3B1AY64 174 aa6.31□□□□□ -1.4
Bdnf-201ENSMUST00000053317 Vmn2r98E9PZ56 857 aa6.31□□□□□ -1.4
Bdnf-201ENSMUST00000053317 Gm2075J3QMW5 144 aa6.31□□□□□ -1.4
Bdnf-201ENSMUST00000053317 Efna3O08545 230 aa6.31□□□□□ -1.4
Bdnf-201ENSMUST00000053317 Slc10a1O08705 362 aa6.31□□□□□ -1.4
Bdnf-201ENSMUST00000053317 Bcl2l15Q08ED0 167 aa6.31□□□□□ -1.4
Bdnf-201ENSMUST00000053317 Dhrs11Q3U0B3 260 aa6.31□□□□□ -1.4
Bdnf-201ENSMUST00000053317 ElaneQ3UP87 265 aa6.31□□□□□ -1.4
Bdnf-201ENSMUST00000053317 BB287469Q3UT53 144 aa6.31□□□□□ -1.4
Bdnf-201ENSMUST00000053317 Tbr1Q64336 681 aa6.31□□□□□ -1.4
Bdnf-201ENSMUST00000053317 Calm5Q6W3E0 140 aa6.31□□□□□ -1.4
Bdnf-201ENSMUST00000053317 Oog2Q7TPX8 476 aa6.31□□□□□ -1.4
Bdnf-201ENSMUST00000053317 Eif1axQ8BMJ3 144 aaKnown RBP6.31□□□□□ -1.4
Bdnf-201ENSMUST00000053317 Ston2Q8BZ60 895 aa6.31□□□□□ -1.4
Bdnf-201ENSMUST00000053317 Kiaa0513Q8R0A7 407 aa6.31□□□□□ -1.4
Bdnf-201ENSMUST00000053317 Ak6Q8VCP8 172 aa6.31□□□□□ -1.4
Bdnf-201ENSMUST00000053317 Tmem45bQ8VCZ2 278 aa6.31□□□□□ -1.4
Bdnf-201ENSMUST00000053317 Slc41a3Q921R8 488 aa6.31□□□□□ -1.4
Bdnf-201ENSMUST00000053317 Cdca4Q9CWM2 237 aa6.31□□□□□ -1.4
Bdnf-201ENSMUST00000053317 Mospd2Q9CWP6 518 aa6.31□□□□□ -1.4
Bdnf-201ENSMUST00000053317 PyurfQ9D1C3 112 aa6.31□□□□□ -1.4
Bdnf-201ENSMUST00000053317 Fndc8Q9D2H8 321 aa6.31□□□□□ -1.4
Bdnf-201ENSMUST00000053317 FtmtQ9D5H4 237 aa6.31□□□□□ -1.4
Bdnf-201ENSMUST00000053317 Psma6Q9QUM9 246 aa6.31□□□□□ -1.4
Bdnf-201ENSMUST00000053317 Npas3Q9QZQ0 925 aa6.31□□□□□ -1.4
Bdnf-201ENSMUST00000053317 Zfp738B8JJX8 793 aa6.3□□□□□ -1.4
Bdnf-201ENSMUST00000053317 Cldn24D3YXJ9 220 aa6.3□□□□□ -1.4
Bdnf-201ENSMUST00000053317 Vmn2r95L7N274 845 aa6.3□□□□□ -1.4
Bdnf-201ENSMUST00000053317 OsmrO70458 971 aa6.3□□□□□ -1.4
Bdnf-201ENSMUST00000053317 Kcnj1O88335 372 aa6.3□□□□□ -1.4
Bdnf-201ENSMUST00000053317 P01635 115 aa6.3□□□□□ -1.4
Bdnf-201ENSMUST00000053317 ChrndP02716 520 aa6.3□□□□□ -1.4
Bdnf-201ENSMUST00000053317 Hoxd9P28357 339 aa6.3□□□□□ -1.4
Bdnf-201ENSMUST00000053317 Defb20Q30KP3 96 aa6.3□□□□□ -1.4
Bdnf-201ENSMUST00000053317 Slc2a6Q3UDF0 497 aa6.3□□□□□ -1.4
Bdnf-201ENSMUST00000053317 Eif4e1bQ3UTA9 244 aa6.3□□□□□ -1.4
Bdnf-201ENSMUST00000053317 Sez6l2Q4V9Z5 910 aa6.3□□□□□ -1.4
Bdnf-201ENSMUST00000053317 FaddQ61160 205 aa6.3□□□□□ -1.4
Bdnf-201ENSMUST00000053317 Tob1Q61471 362 aa6.3□□□□□ -1.4
Bdnf-201ENSMUST00000053317 Eif4e2Q8BMB3 245 aaKnown RBP6.3□□□□□ -1.4
Bdnf-201ENSMUST00000053317 Q8BR90 294 aa6.3□□□□□ -1.4
Bdnf-201ENSMUST00000053317 Txnl4bQ8BUH1 149 aa6.3□□□□□ -1.4
Bdnf-201ENSMUST00000053317 Defb6Q91VD6 63 aa6.3□□□□□ -1.4
Bdnf-201ENSMUST00000053317 Rbms1Q91W59 403 aaKnown RBP6.3□□□□□ -1.4
Bdnf-201ENSMUST00000053317 Sucnr1Q99MT6 317 aa6.3□□□□□ -1.4
Bdnf-201ENSMUST00000053317 NepnQ9CQ76 512 aa6.3□□□□□ -1.4
Bdnf-201ENSMUST00000053317 Ankhd1E9PUR0 2548 aaKnown RBP6.3□□□□□ -1.4
Bdnf-201ENSMUST00000053317 2610044O15Rik8A0A087WRJ1 410 aa6.3□□□□□ -1.4
Bdnf-201ENSMUST00000053317 Hbb-bh2B2RVB7 147 aa6.3□□□□□ -1.4
Bdnf-201ENSMUST00000053317 Kcnmb3E9Q7U0 239 aa6.3□□□□□ -1.4
Bdnf-201ENSMUST00000053317 Gm6526G3X9Q9 198 aa6.3□□□□□ -1.4
Bdnf-201ENSMUST00000053317 Gm3099J3QPA5 205 aa6.3□□□□□ -1.4
Bdnf-201ENSMUST00000053317 Vmn2r29L7N2D4 852 aa6.3□□□□□ -1.4
Bdnf-201ENSMUST00000053317 Aif1O70200 147 aa6.3□□□□□ -1.4
Bdnf-201ENSMUST00000053317 Klf10O89091 479 aa6.3□□□□□ -1.4
Bdnf-201ENSMUST00000053317 GzmeP08884 248 aa6.3□□□□□ -1.4
Bdnf-201ENSMUST00000053317 Gpd1P13707 349 aa6.3□□□□□ -1.4
Bdnf-201ENSMUST00000053317 TaglnP37804 201 aaKnown RBP6.3□□□□□ -1.4
Bdnf-201ENSMUST00000053317 Bmp8bP55105 399 aa6.3□□□□□ -1.4
Retrieved 100 of 22,080 RNA–protein pairs in 57.9 ms